RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 RPL7L1Q6DKI1 246 aaKnown RBP-2.84□□□□□ -2.86
RNU4-88P-201ENST00000411220 CMC1Q7Z7K0 106 aa-2.84□□□□□ -2.86
RNU4-88P-201ENST00000411220 TRMT10AQ8TBZ6 339 aaKnown RBP-2.84□□□□□ -2.86
RNU4-88P-201ENST00000411220 CERS2Q96G23 380 aa-2.84□□□□□ -2.86
RNU4-88P-201ENST00000411220 MRPL1Q9BYD6 325 aaKnown RBP-2.84□□□□□ -2.86
RNU4-88P-201ENST00000411220 TMEM126AQ9H061 195 aa-2.84□□□□□ -2.86
RNU4-88P-201ENST00000411220 HDHD2Q9H0R4 259 aa-2.84□□□□□ -2.86
RNU4-88P-201ENST00000411220 OR51M1Q9H341 326 aa-2.84□□□□□ -2.86
RNU4-88P-201ENST00000411220 ANXA10Q9UJ72 324 aa-2.84□□□□□ -2.86
RNU4-88P-201ENST00000411220 NWD1Q149M9 1564 aa-2.85□□□□□ -2.87
RNU4-88P-201ENST00000411220 LOC100506127A0A0U1RQW1 187 aa-2.85□□□□□ -2.87
RNU4-88P-201ENST00000411220 FAM240AA0A1B0GVK7 77 aa-2.85□□□□□ -2.87
RNU4-88P-201ENST00000411220 hCG_1807616A0A1W2PRN6 198 aa-2.85□□□□□ -2.87
RNU4-88P-201ENST00000411220 HMGN4O00479 90 aa-2.85□□□□□ -2.87
RNU4-88P-201ENST00000411220 MPHOSPH10O00566 681 aaKnown RBP-2.85□□□□□ -2.87
RNU4-88P-201ENST00000411220 FIBPO43427 364 aa-2.85□□□□□ -2.87
RNU4-88P-201ENST00000411220 IFNA10P01566 189 aa-2.85□□□□□ -2.87
RNU4-88P-201ENST00000411220 MT-ND6P03923 174 aa-2.85□□□□□ -2.87
RNU4-88P-201ENST00000411220 HSMCR30P0CW71 290 aa-2.85□□□□□ -2.87
RNU4-88P-201ENST00000411220 SLC25A4P12235 298 aa-2.85□□□□□ -2.87
RNU4-88P-201ENST00000411220 ARL3P36405 182 aa-2.85□□□□□ -2.87
RNU4-88P-201ENST00000411220 HADHBP55084 474 aaKnown RBP-2.85□□□□□ -2.87
RNU4-88P-201ENST00000411220 RAB8AP61006 207 aa-2.85□□□□□ -2.87
RNU4-88P-201ENST00000411220 CARTPTQ16568 116 aa-2.85□□□□□ -2.87
RNU4-88P-201ENST00000411220 LTC4SQ16873 150 aa-2.85□□□□□ -2.87
RNU4-88P-201ENST00000411220 LRRC23Q53EV4 343 aaPredicted RBP-2.85□□□□□ -2.87
RNU4-88P-201ENST00000411220 CMTM1Q8IZ96 169 aa-2.85□□□□□ -2.87
RNU4-88P-201ENST00000411220 SYCP3Q8IZU3 236 aa-2.85□□□□□ -2.87
RNU4-88P-201ENST00000411220 CDRT4Q8N9R6 151 aa-2.85□□□□□ -2.87
RNU4-88P-201ENST00000411220 SPTSSBQ8NFR3 76 aa-2.85□□□□□ -2.87
RNU4-88P-201ENST00000411220 OR51D1Q8NGF3 324 aa-2.85□□□□□ -2.87
RNU4-88P-201ENST00000411220 CLHC1Q8NHS4 586 aa-2.85□□□□□ -2.87
RNU4-88P-201ENST00000411220 NT5C3BQ969T7 300 aa-2.85□□□□□ -2.87
RNU4-88P-201ENST00000411220 CCDC126Q96EE4 140 aa-2.85□□□□□ -2.87
RNU4-88P-201ENST00000411220 EEF2KMTQ96G04 330 aa-2.85□□□□□ -2.87
RNU4-88P-201ENST00000411220 CFAP36Q96G28 342 aa-2.85□□□□□ -2.87
RNU4-88P-201ENST00000411220 PPM1MQ96MI6 270 aa-2.85□□□□□ -2.87
RNU4-88P-201ENST00000411220 SCGB3A2Q96PL1 93 aa-2.85□□□□□ -2.87
RNU4-88P-201ENST00000411220 C6orf50Q9HD87 102 aa-2.85□□□□□ -2.87
RNU4-88P-201ENST00000411220 TAS2R8Q9NYW2 309 aa-2.85□□□□□ -2.87
RNU4-88P-201ENST00000411220 AKAP7Q9P0M2 348 aaPredicted RBP-2.85□□□□□ -2.87
RNU4-88P-201ENST00000411220 MPC1Q9Y5U8 109 aa-2.85□□□□□ -2.87
RNU4-88P-201ENST00000411220 LINC01558Q9Y6Z2 57 aa-2.85□□□□□ -2.87
RNU4-88P-201ENST00000411220 LRRC9Q6ZRR7 1453 aa-2.85□□□□□ -2.87
RNU4-88P-201ENST00000411220 NWD2Q9ULI1 1742 aa-2.85□□□□□ -2.87
RNU4-88P-201ENST00000411220 NHSQ6T4R5 1651 aa-2.85□□□□□ -2.87
RNU4-88P-201ENST00000411220 NESP48681 1621 aa-2.86□□□□□ -2.87
RNU4-88P-201ENST00000411220 N4BP2Q86UW6 1770 aaPredicted RBP-2.86□□□□□ -2.87
RNU4-88P-201ENST00000411220 KIAA0586Q9BVV6 1533 aa-2.86□□□□□ -2.87
RNU4-88P-201ENST00000411220 ZNF701M0R085 212 aaPredicted RBP-2.86□□□□□ -2.87
RNU4-88P-201ENST00000411220 RNF13O43567 381 aa-2.86□□□□□ -2.87
RNU4-88P-201ENST00000411220 CRCPO75575 148 aa-2.86□□□□□ -2.87
RNU4-88P-201ENST00000411220 ATP5HO75947 161 aa-2.86□□□□□ -2.87
RNU4-88P-201ENST00000411220 TRACP01848 142 aa-2.86□□□□□ -2.87
RNU4-88P-201ENST00000411220 HBE1P02100 147 aa-2.86□□□□□ -2.87
RNU4-88P-201ENST00000411220 CALB1P05937 261 aa-2.86□□□□□ -2.87
RNU4-88P-201ENST00000411220 ARMS2P0C7Q2 107 aa-2.86□□□□□ -2.87
RNU4-88P-201ENST00000411220 SLC25A6P12236 298 aa-2.86□□□□□ -2.87
RNU4-88P-201ENST00000411220 KCNE1P15382 129 aa-2.86□□□□□ -2.87
RNU4-88P-201ENST00000411220 HTN1P15515 57 aa-2.86□□□□□ -2.87
RNU4-88P-201ENST00000411220 GCH1P30793 250 aa-2.86□□□□□ -2.87
RNU4-88P-201ENST00000411220 HSD17B12Q53GQ0 312 aa-2.86□□□□□ -2.87
RNU4-88P-201ENST00000411220 ASCL4Q6XD76 172 aa-2.86□□□□□ -2.87
RNU4-88P-201ENST00000411220 FAM3CQ92520 227 aa-2.86□□□□□ -2.87
RNU4-88P-201ENST00000411220 AQP10Q96PS8 301 aa-2.86□□□□□ -2.87
RNU4-88P-201ENST00000411220 SMIM7Q9BQ49 75 aa-2.86□□□□□ -2.87
RNU4-88P-201ENST00000411220 COA1Q9GZY4 146 aa-2.86□□□□□ -2.87
RNU4-88P-201ENST00000411220 AGPAT3Q9NRZ7 376 aa-2.86□□□□□ -2.87
RNU4-88P-201ENST00000411220 FKBP11Q9NYL4 201 aa-2.86□□□□□ -2.87
RNU4-88P-201ENST00000411220 TPRKBQ9Y3C4 175 aa-2.86□□□□□ -2.87
RNU4-88P-201ENST00000411220 V9GYQ6 96 aa-2.86□□□□□ -2.87
RNU4-88P-201ENST00000411220 CCDC180Q9P1Z9 1646 aa-2.86□□□□□ -2.87
RNU4-88P-201ENST00000411220 MAP3K4Q9Y6R4 1608 aa-2.86□□□□□ -2.87
RNU4-88P-201ENST00000411220 KIF20BQ96Q89 1820 aa-2.86□□□□□ -2.87
RNU4-88P-201ENST00000411220 TRAV16A0A0A6YYK6 109 aaPredicted RBP-2.87□□□□□ -2.87
RNU4-88P-201ENST00000411220 TRAV21A0A0B4J279 112 aa-2.87□□□□□ -2.87
RNU4-88P-201ENST00000411220 IGHV1-69-2A0A0G2JMI3 117 aa-2.87□□□□□ -2.87
RNU4-88P-201ENST00000411220 A0A0J9YY10 115 aa-2.87□□□□□ -2.87
RNU4-88P-201ENST00000411220 A0A1B0GX78 115 aa-2.87□□□□□ -2.87
RNU4-88P-201ENST00000411220 ORM1P02763 201 aa-2.87□□□□□ -2.87
RNU4-88P-201ENST00000411220 CLEC3BP05452 202 aa-2.87□□□□□ -2.87
RNU4-88P-201ENST00000411220 SLC1A1P43005 524 aa-2.87□□□□□ -2.87
RNU4-88P-201ENST00000411220 NDUFA6P56556 154 aa-2.87□□□□□ -2.87
RNU4-88P-201ENST00000411220 ARF3P61204 181 aaPredicted RBP-2.87□□□□□ -2.87
RNU4-88P-201ENST00000411220 PSMC5P62195 406 aa-2.87□□□□□ -2.87
RNU4-88P-201ENST00000411220 RPL38P63173 70 aaKnown RBP-2.87□□□□□ -2.87
RNU4-88P-201ENST00000411220 ARF1P84077 181 aaKnown RBP-2.87□□□□□ -2.87
RNU4-88P-201ENST00000411220 SSX6Q7RTT6 188 aa-2.87□□□□□ -2.87
RNU4-88P-201ENST00000411220 CCDC91Q7Z6B0 441 aa-2.87□□□□□ -2.87
RNU4-88P-201ENST00000411220 AGR3Q8TD06 166 aa-2.87□□□□□ -2.87
RNU4-88P-201ENST00000411220 MRAP2Q96G30 205 aa-2.87□□□□□ -2.87
RNU4-88P-201ENST00000411220 FTHL17Q9BXU8 183 aa-2.87□□□□□ -2.87
RNU4-88P-201ENST00000411220 NCOR1P1Q9H4R4 102 aa-2.87□□□□□ -2.87
RNU4-88P-201ENST00000411220 NFAT5O94916 1531 aa-2.88□□□□□ -2.87
RNU4-88P-201ENST00000411220 EHBP1L1Q8N3D4 1523 aa-2.88□□□□□ -2.87
RNU4-88P-201ENST00000411220 EVC2Q86UK5 1308 aa-2.88□□□□□ -2.87
RNU4-88P-201ENST00000411220 IGLC7A0M8Q6 106 aa-2.88□□□□□ -2.87
RNU4-88P-201ENST00000411220 C1orf196B1AJZ1 125 aa-2.88□□□□□ -2.87
RNU4-88P-201ENST00000411220 GOLGA8SH3BPF8 625 aa-2.88□□□□□ -2.87
RNU4-88P-201ENST00000411220 SFT2D2O95562 160 aa-2.88□□□□□ -2.87
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms