RNA–Protein interactions for RNA: ENST00000409694.6

SYNE1-210, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 10,634 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-210ENST00000409694 RNF185Q96GF1 192 aa6.1□□□□□ -1.43
SYNE1-210ENST00000409694 J3QKU1 62 aa6.1□□□□□ -1.43
SYNE1-210ENST00000409694 UBE2D1P51668 147 aa6.1□□□□□ -1.43
SYNE1-210ENST00000409694 TEX49A0A1B0GTD5 131 aa6.1□□□□□ -1.43
SYNE1-210ENST00000409694 FXYD2P54710 66 aa6.1□□□□□ -1.43
SYNE1-210ENST00000409694 C1orf195Q5TG92 126 aa6.1□□□□□ -1.43
SYNE1-210ENST00000409694 CRIPAKQ8N1N5 446 aa6.1□□□□□ -1.43
SYNE1-210ENST00000409694 IGLV3-9A0A075B6K5 115 aa6.1□□□□□ -1.43
SYNE1-210ENST00000409694 NDUFA7O95182 113 aa6.1□□□□□ -1.43
SYNE1-210ENST00000409694 K7EMT4 169 aa6.1□□□□□ -1.43
SYNE1-210ENST00000409694 IGLV2-23P01705 113 aa6.1□□□□□ -1.43
SYNE1-210ENST00000409694 WFDC2Q14508 124 aa6.1□□□□□ -1.43
SYNE1-210ENST00000409694 PRRC2AP48634 2157 aaKnown RBP6.1□□□□□ -1.43
SYNE1-210ENST00000409694 A0A0J9YXV3 536 aa6.1□□□□□ -1.43
SYNE1-210ENST00000409694 C17orf82Q86X59 251 aaPredicted RBP6.1□□□□□ -1.43
SYNE1-210ENST00000409694 TPSG1Q9NRR2 321 aa6.1□□□□□ -1.43
SYNE1-210ENST00000409694 DHRS4-AS1Q9P1J3 65 aa6.1□□□□□ -1.43
SYNE1-210ENST00000409694 TRAV26-1A0A087WT03 109 aa6.1□□□□□ -1.43
SYNE1-210ENST00000409694 IGLV1-44P01699 117 aa6.1□□□□□ -1.43
SYNE1-210ENST00000409694 C20orf197Q8N268 126 aa6.09□□□□□ -1.43
SYNE1-210ENST00000409694 SPRY4Q9C004 299 aa6.09□□□□□ -1.43
SYNE1-210ENST00000409694 SDIM1Q6ZPB5 146 aa6.09□□□□□ -1.43
SYNE1-210ENST00000409694 APRG1Q8IVJ8 170 aa6.09□□□□□ -1.43
SYNE1-210ENST00000409694 SERP2Q8N6R1 65 aa6.09□□□□□ -1.43
SYNE1-210ENST00000409694 Q8NFD4 153 aa6.09□□□□□ -1.43
SYNE1-210ENST00000409694 ZNRD1Q9P1U0 126 aa6.09□□□□□ -1.43
SYNE1-210ENST00000409694 TCL1BO95988 128 aa6.09□□□□□ -1.43
SYNE1-210ENST00000409694 SLURP1P55000 103 aa6.09□□□□□ -1.43
SYNE1-210ENST00000409694 C9orf85Q96MD7 179 aa6.09□□□□□ -1.43
SYNE1-210ENST00000409694 MLST8Q9BVC4 326 aa6.09□□□□□ -1.43
SYNE1-210ENST00000409694 CACNA1EQ15878 2313 aa6.09□□□□□ -1.43
SYNE1-210ENST00000409694 FHL1Q13642 323 aa6.09□□□□□ -1.44
SYNE1-210ENST00000409694 ENHOQ6UWT2 76 aa6.09□□□□□ -1.44
SYNE1-210ENST00000409694 A0A0J9YXY3 114 aa6.08□□□□□ -1.44
SYNE1-210ENST00000409694 NFE4Q86UQ8 179 aa6.08□□□□□ -1.44
SYNE1-210ENST00000409694 SMAD5-AS1Q9Y6J3 95 aa6.08□□□□□ -1.44
SYNE1-210ENST00000409694 ODF1Q14990 250 aa6.08□□□□□ -1.44
SYNE1-210ENST00000409694 ODF3Q96PU9 254 aa6.08□□□□□ -1.44
SYNE1-210ENST00000409694 P0DMU3 169 aa6.08□□□□□ -1.44
SYNE1-210ENST00000409694 FAM231AP0DMU4 169 aa6.08□□□□□ -1.44
SYNE1-210ENST00000409694 FAM231CP0DMU5 169 aa6.08□□□□□ -1.44
SYNE1-210ENST00000409694 GTSF1Q8WW33 167 aa6.08□□□□□ -1.44
SYNE1-210ENST00000409694 KLK12Q9UKR0 248 aa6.08□□□□□ -1.44
SYNE1-210ENST00000409694 ZFAND2AQ8N6M9 145 aa6.08□□□□□ -1.44
SYNE1-210ENST00000409694 PRO0255Q9UI72 69 aa6.08□□□□□ -1.44
SYNE1-210ENST00000409694 IGHV4-59P01825 116 aa6.08□□□□□ -1.44
SYNE1-210ENST00000409694 IGLC6P0CF74 106 aa6.07□□□□□ -1.44
SYNE1-210ENST00000409694 ZNF581Q9P0T4 197 aa6.07□□□□□ -1.44
SYNE1-210ENST00000409694 SMIM9A6NGZ8 99 aa6.07□□□□□ -1.44
SYNE1-210ENST00000409694 MALRD1Q5VYJ5 2156 aa6.07□□□□□ -1.44
SYNE1-210ENST00000409694 IGLV11-55A0A075B6I3 123 aa6.07□□□□□ -1.44
SYNE1-210ENST00000409694 SPRY2O43597 315 aa6.07□□□□□ -1.44
SYNE1-210ENST00000409694 MYCNOSP40205 109 aa6.07□□□□□ -1.44
SYNE1-210ENST00000409694 RPL39P62891 51 aaKnown RBP6.07□□□□□ -1.44
SYNE1-210ENST00000409694 TIMM17BO60830 172 aa6.07□□□□□ -1.44
SYNE1-210ENST00000409694 FAM222AQ5U5X8 452 aa6.07□□□□□ -1.44
SYNE1-210ENST00000409694 C2orf70A6NJV1 201 aa6.07□□□□□ -1.44
SYNE1-210ENST00000409694 UBE2D4Q9Y2X8 147 aa6.07□□□□□ -1.44
SYNE1-210ENST00000409694 IBA57-AS1B1ANH7 110 aa6.07□□□□□ -1.44
SYNE1-210ENST00000409694 DEFB112Q30KQ8 113 aa6.06□□□□□ -1.44
SYNE1-210ENST00000409694 DEFB136Q30KP8 78 aa6.06□□□□□ -1.44
SYNE1-210ENST00000409694 DEFB113Q30KQ7 82 aa6.06□□□□□ -1.44
SYNE1-210ENST00000409694 MAPK1IP1LQ8NDC0 245 aa6.06□□□□□ -1.44
SYNE1-210ENST00000409694 CENPVL3A0A0U1RRI6 287 aa6.06□□□□□ -1.44
SYNE1-210ENST00000409694 I3L2K1 104 aa6.06□□□□□ -1.44
SYNE1-210ENST00000409694 PRYO14603 147 aa6.06□□□□□ -1.44
SYNE1-210ENST00000409694 LOXL1Q08397 574 aaPredicted RBP6.06□□□□□ -1.44
SYNE1-210ENST00000409694 FAM19A1Q7Z5A9 133 aa6.06□□□□□ -1.44
SYNE1-210ENST00000409694 WNK1Q9H4A3 2382 aa6.06□□□□□ -1.44
SYNE1-210ENST00000409694 ODF3L1Q8IXM7 274 aa6.06□□□□□ -1.44
SYNE1-210ENST00000409694 VWCEQ96DN2 955 aa6.06□□□□□ -1.44
SYNE1-210ENST00000409694 LINC00474Q9P2X8 69 aa6.06□□□□□ -1.44
SYNE1-210ENST00000409694 A0A087WZ39 114 aa6.06□□□□□ -1.44
SYNE1-210ENST00000409694 REG3AQ06141 175 aa6.06□□□□□ -1.44
SYNE1-210ENST00000409694 CACNA1HO95180 2353 aa6.06□□□□□ -1.44
SYNE1-210ENST00000409694 UBE2D3P61077 147 aa6.06□□□□□ -1.44
SYNE1-210ENST00000409694 ARTNQ5T4W7 220 aa6.05□□□□□ -1.44
SYNE1-210ENST00000409694 SPATA12Q7Z6I5 190 aa6.05□□□□□ -1.44
SYNE1-210ENST00000409694 C5orf56Q8N8D9 126 aa6.05□□□□□ -1.44
SYNE1-210ENST00000409694 C11orf45Q8TAV5 145 aa6.05□□□□□ -1.44
SYNE1-210ENST00000409694 CRYGDP07320 174 aa6.05□□□□□ -1.44
SYNE1-210ENST00000409694 LRRC75A-AS1Q8N1F1 130 aa6.05□□□□□ -1.44
SYNE1-210ENST00000409694 HIGD2AQ9BW72 106 aa6.05□□□□□ -1.44
SYNE1-210ENST00000409694 Q6ZR03 302 aa6.05□□□□□ -1.44
SYNE1-210ENST00000409694 MUC7Q8TAX7 377 aa6.05□□□□□ -1.44
SYNE1-210ENST00000409694 COX17Q14061 63 aa6.05□□□□□ -1.44
SYNE1-210ENST00000409694 PRSS33Q8NF86 280 aa6.05□□□□□ -1.44
SYNE1-210ENST00000409694 PTH2Q96A98 100 aa6.05□□□□□ -1.44
SYNE1-210ENST00000409694 IGKV1-17P01599 117 aa6.05□□□□□ -1.44
SYNE1-210ENST00000409694 CACNA1GO43497 2377 aa6.05□□□□□ -1.44
SYNE1-210ENST00000409694 HILS1P60008 231 aa6.05□□□□□ -1.44
SYNE1-210ENST00000409694 Q8N9W7 124 aa6.04□□□□□ -1.44
SYNE1-210ENST00000409694 DEFB135Q30KP9 77 aa6.04□□□□□ -1.44
SYNE1-210ENST00000409694 C20orf203Q8NBC4 194 aa6.04□□□□□ -1.44
SYNE1-210ENST00000409694 ZNF524Q96C55 264 aa6.04□□□□□ -1.44
SYNE1-210ENST00000409694 IGHV7-81A0A0B4J1V7 117 aa6.04□□□□□ -1.44
SYNE1-210ENST00000409694 CCKP06307 115 aa6.04□□□□□ -1.44
SYNE1-210ENST00000409694 TET2Q6N021 2002 aaPredicted RBP6.04□□□□□ -1.44
SYNE1-210ENST00000409694 LYPD6Q86Y78 171 aa6.03□□□□□ -1.44
SYNE1-210ENST00000409694 AJUBAQ96IF1 538 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms