RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 HIST2H2BDQ6DRA6 164 aa13.47□□□□□ -0.25
SMPD4-202ENST00000409031 IGFL2Q6UWQ7 119 aa13.47□□□□□ -0.25
SMPD4-202ENST00000409031 MSMBP08118 114 aa13.46□□□□□ -0.25
SMPD4-202ENST00000409031 CFHR3Q02985 330 aa13.46□□□□□ -0.25
SMPD4-202ENST00000409031 TMEM223A0PJW6 202 aa13.46□□□□□ -0.25
SMPD4-202ENST00000409031 ZNF22P17026 224 aaPredicted RBP13.46□□□□□ -0.25
SMPD4-202ENST00000409031 RNF152Q8N8N0 203 aa13.46□□□□□ -0.25
SMPD4-202ENST00000409031 COX7B2Q8TF08 81 aa13.46□□□□□ -0.25
SMPD4-202ENST00000409031 H3BQ85 93 aa13.45□□□□□ -0.26
SMPD4-202ENST00000409031 ELANEP08246 267 aa13.45□□□□□ -0.26
SMPD4-202ENST00000409031 C14orf132Q9NPU4 83 aa13.45□□□□□ -0.26
SMPD4-202ENST00000409031 Q9HAA7 133 aa13.44□□□□□ -0.26
SMPD4-202ENST00000409031 C5orf38Q86SI9 138 aa13.44□□□□□ -0.26
SMPD4-202ENST00000409031 NRACQ8N912 160 aa13.44□□□□□ -0.26
SMPD4-202ENST00000409031 AJUBAQ96IF1 538 aa13.44□□□□□ -0.26
SMPD4-202ENST00000409031 LRRC75A-AS1Q8N1F1 130 aa13.44□□□□□ -0.26
SMPD4-202ENST00000409031 TMEM256-PLSCR3K7ERE1 68 aa13.43□□□□□ -0.26
SMPD4-202ENST00000409031 K7EMT4 169 aa13.42□□□□□ -0.26
SMPD4-202ENST00000409031 C20orf197Q8N268 126 aa13.42□□□□□ -0.26
SMPD4-202ENST00000409031 KIAA1549Q9HCM3 1950 aa13.42□□□□□ -0.26
SMPD4-202ENST00000409031 ZNF561-AS1K7EIQ3 104 aa13.42□□□□□ -0.26
SMPD4-202ENST00000409031 SDIM1Q6ZPB5 146 aa13.42□□□□□ -0.26
SMPD4-202ENST00000409031 COX7CP15954 63 aa13.42□□□□□ -0.26
SMPD4-202ENST00000409031 MIR7-3HGQ8N6C7 128 aa13.42□□□□□ -0.26
SMPD4-202ENST00000409031 CNFNQ9BYD5 112 aa13.42□□□□□ -0.26
SMPD4-202ENST00000409031 NSUN5P1Q3KNT7 163 aa13.41□□□□□ -0.26
SMPD4-202ENST00000409031 TNRC6BQ9UPQ9 1833 aaKnown RBP13.41□□□□□ -0.26
SMPD4-202ENST00000409031 FAM240AA0A1B0GVK7 77 aa13.41□□□□□ -0.26
SMPD4-202ENST00000409031 XCL1P47992 114 aa13.41□□□□□ -0.26
SMPD4-202ENST00000409031 ATP5EP2Q5VTU8 51 aa13.41□□□□□ -0.26
SMPD4-202ENST00000409031 SERP2Q8N6R1 65 aa13.41□□□□□ -0.26
SMPD4-202ENST00000409031 FAM236DA0A1B0GTK5 79 aa13.4□□□□□ -0.26
SMPD4-202ENST00000409031 FAM236CP0DP71 79 aa13.4□□□□□ -0.26
SMPD4-202ENST00000409031 UBE2D1P51668 147 aa13.4□□□□□ -0.26
SMPD4-202ENST00000409031 DEFB1P60022 68 aa13.4□□□□□ -0.26
SMPD4-202ENST00000409031 ZMAT4Q9H898 229 aa13.4□□□□□ -0.26
SMPD4-202ENST00000409031 LST1O00453 97 aa13.4□□□□□ -0.26
SMPD4-202ENST00000409031 ANKHD1Q8IWZ3 2542 aaKnown RBP13.4□□□□□ -0.26
SMPD4-202ENST00000409031 TRAV23DV6A0A075B6W5 121 aa13.4□□□□□ -0.26
SMPD4-202ENST00000409031 BRK1Q8WUW1 75 aa13.4□□□□□ -0.26
SMPD4-202ENST00000409031 PDE6GP18545 87 aa13.39□□□□□ -0.27
SMPD4-202ENST00000409031 LINC01356Q8N9X3 169 aa13.39□□□□□ -0.27
SMPD4-202ENST00000409031 ATG2AQ2TAZ0 1938 aa13.39□□□□□ -0.27
SMPD4-202ENST00000409031 IGLV4-3A0A075B6K6 122 aa13.38□□□□□ -0.27
SMPD4-202ENST00000409031 FAM110AQ9BQ89 295 aa13.38□□□□□ -0.27
SMPD4-202ENST00000409031 SEM1Q6ZVN7 128 aa13.38□□□□□ -0.27
SMPD4-202ENST00000409031 C5orf56Q8N8D9 126 aa13.38□□□□□ -0.27
SMPD4-202ENST00000409031 SPRY4Q9C004 299 aa13.38□□□□□ -0.27
SMPD4-202ENST00000409031 UBE2D3P61077 147 aa13.37□□□□□ -0.27
SMPD4-202ENST00000409031 UBE2D2P62837 147 aa13.37□□□□□ -0.27
SMPD4-202ENST00000409031 K7EQD1 137 aa13.37□□□□□ -0.27
SMPD4-202ENST00000409031 C2CD3Q4AC94 2353 aa13.37□□□□□ -0.27
SMPD4-202ENST00000409031 RPL18AQ02543 176 aaKnown RBP13.37□□□□□ -0.27
SMPD4-202ENST00000409031 CEMP1Q6PRD7 247 aaPredicted RBP13.37□□□□□ -0.27
SMPD4-202ENST00000409031 TRBV27A0A0K0K1C4 114 aa13.36□□□□□ -0.27
SMPD4-202ENST00000409031 LINC00308Q8TCZ7 52 aa13.36□□□□□ -0.27
SMPD4-202ENST00000409031 NAV3Q8IVL0 2385 aa13.36□□□□□ -0.27
SMPD4-202ENST00000409031 WNK1Q9H4A3 2382 aa13.36□□□□□ -0.27
SMPD4-202ENST00000409031 ANGP03950 147 aaKnown RBP13.36□□□□□ -0.27
SMPD4-202ENST00000409031 IGHV4-4A0A075B6R2 117 aa13.36□□□□□ -0.27
SMPD4-202ENST00000409031 M0QXV9 152 aa13.36□□□□□ -0.27
SMPD4-202ENST00000409031 NKAPP1Q8N9T2 125 aa13.36□□□□□ -0.27
SMPD4-202ENST00000409031 A0A096LNJ9 63 aa13.35□□□□□ -0.27
SMPD4-202ENST00000409031 CXCL5P42830 114 aa13.35□□□□□ -0.27
SMPD4-202ENST00000409031 C2orf16Q68DN1 1984 aa13.35□□□□□ -0.27
SMPD4-202ENST00000409031 TMEM263Q8WUH6 116 aaKnown RBP13.35□□□□□ -0.27
SMPD4-202ENST00000409031 NOP10Q9NPE3 64 aaKnown RBP13.35□□□□□ -0.27
SMPD4-202ENST00000409031 Q6ZS46 218 aa13.35□□□□□ -0.27
SMPD4-202ENST00000409031 TIMM17BO60830 172 aa13.35□□□□□ -0.27
SMPD4-202ENST00000409031 GAS8-AS1O95177 125 aa13.35□□□□□ -0.27
SMPD4-202ENST00000409031 UPK3BQ9BT76 320 aa13.35□□□□□ -0.27
SMPD4-202ENST00000409031 NUP210LQ5VU65 1888 aa13.34□□□□□ -0.27
SMPD4-202ENST00000409031 CCDC140Q96MF4 163 aa13.34□□□□□ -0.27
SMPD4-202ENST00000409031 CDKN2A-AS1Q9UH64 79 aa13.34□□□□□ -0.27
SMPD4-202ENST00000409031 A0A0J9YX75 114 aa13.34□□□□□ -0.27
SMPD4-202ENST00000409031 TRBV6-5A0A0K0K1A5 114 aa13.34□□□□□ -0.27
SMPD4-202ENST00000409031 SMAD5-AS1Q9Y6J3 95 aa13.34□□□□□ -0.27
SMPD4-202ENST00000409031 IGHV4OR15-8A0A075B7B6 117 aa13.34□□□□□ -0.27
SMPD4-202ENST00000409031 A0A087WW49 117 aa13.34□□□□□ -0.27
SMPD4-202ENST00000409031 UNQ9165/PRO28630Q6UXU0 137 aa13.34□□□□□ -0.27
SMPD4-202ENST00000409031 GPHB5Q86YW7 130 aa13.34□□□□□ -0.27
SMPD4-202ENST00000409031 NREPQ16612 68 aa13.33□□□□□ -0.28
SMPD4-202ENST00000409031 ZFAND2AQ8N6M9 145 aa13.33□□□□□ -0.28
SMPD4-202ENST00000409031 H7C423 109 aa13.33□□□□□ -0.28
SMPD4-202ENST00000409031 LINC00694P0DN24 101 aa13.33□□□□□ -0.28
SMPD4-202ENST00000409031 FUSP35637 526 aaKnown RBP eCLIP13.33□□□□□ -0.28
SMPD4-202ENST00000409031 USP17L23D6RBM5 183 aa13.33□□□□□ -0.28
SMPD4-202ENST00000409031 PLA2G2CQ5R387 149 aa13.32□□□□□ -0.28
SMPD4-202ENST00000409031 SRCAPQ6ZRS2 3230 aa13.32□□□□□ -0.28
SMPD4-202ENST00000409031 NDUFA1O15239 70 aa13.32□□□□□ -0.28
SMPD4-202ENST00000409031 CLPSL2Q6UWE3 100 aa13.32□□□□□ -0.28
SMPD4-202ENST00000409031 ODF3Q96PU9 254 aa13.31□□□□□ -0.28
SMPD4-202ENST00000409031 PYGO1Q9Y3Y4 419 aa13.31□□□□□ -0.28
SMPD4-202ENST00000409031 TRBV10-1A0A0K0K1A3 114 aa13.3□□□□□ -0.28
SMPD4-202ENST00000409031 CDK2AP2O75956 126 aa13.3□□□□□ -0.28
SMPD4-202ENST00000409031 ZFAND3Q9H8U3 227 aa13.3□□□□□ -0.28
SMPD4-202ENST00000409031 TANC2Q9HCD6 1990 aa13.3□□□□□ -0.28
SMPD4-202ENST00000409031 M0QY20 66 aa13.3□□□□□ -0.28
SMPD4-202ENST00000409031 SMIM9A6NGZ8 99 aa13.3□□□□□ -0.28
SMPD4-202ENST00000409031 BLCAPP62952 87 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms