RNA–Protein interactions for RNA: ENST00000408999.3

RGPD4-201, Transcript of RANBP2-like and GRIP domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD4, Length 5,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4-201ENST00000408999 ZNF479Q96JC4 524 aa2.93□□□□□ -1.94
RGPD4-201ENST00000408999 AGPAT4-IT1Q9H0P7 198 aa2.93□□□□□ -1.94
RGPD4-201ENST00000408999 A6NDX4 124 aa2.93□□□□□ -1.94
RGPD4-201ENST00000408999 ERG28Q9UKR5 140 aa2.93□□□□□ -1.94
RGPD4-201ENST00000408999 PAX4O43316 350 aa2.93□□□□□ -1.94
RGPD4-201ENST00000408999 CRYGCP07315 174 aa2.93□□□□□ -1.94
RGPD4-201ENST00000408999 PMVKQ15126 192 aa2.93□□□□□ -1.94
RGPD4-201ENST00000408999 C6orf226Q5I0X4 101 aa2.93□□□□□ -1.94
RGPD4-201ENST00000408999 ZNF843Q8N446 348 aa2.93□□□□□ -1.94
RGPD4-201ENST00000408999 GATD1Q8NB37 220 aa2.93□□□□□ -1.94
RGPD4-201ENST00000408999 TMEM243Q9BU79 118 aa2.93□□□□□ -1.94
RGPD4-201ENST00000408999 DNAH2Q9P225 4427 aa2.93□□□□□ -1.94
RGPD4-201ENST00000408999 TRAV8-4A0A0B4J246 113 aa2.92□□□□□ -1.94
RGPD4-201ENST00000408999 DNAJC9-AS1A6NH13 148 aa2.92□□□□□ -1.94
RGPD4-201ENST00000408999 TTC32Q5I0X7 151 aa2.92□□□□□ -1.94
RGPD4-201ENST00000408999 ZC2HC1BQ5TFG8 222 aa2.92□□□□□ -1.94
RGPD4-201ENST00000408999 Q6ZWC4 215 aa2.92□□□□□ -1.94
RGPD4-201ENST00000408999 LRRC75A-AS1Q8N1F1 130 aa2.92□□□□□ -1.94
RGPD4-201ENST00000408999 NAA38Q9BRA0 125 aaKnown RBP2.92□□□□□ -1.94
RGPD4-201ENST00000408999 CST9LQ9H4G1 147 aa2.92□□□□□ -1.94
RGPD4-201ENST00000408999 A0A1B0GV72 72 aa2.92□□□□□ -1.94
RGPD4-201ENST00000408999 INS-IGF2F8WCM5 200 aa2.92□□□□□ -1.94
RGPD4-201ENST00000408999 SPRY2O43597 315 aa2.92□□□□□ -1.94
RGPD4-201ENST00000408999 TRBV12-3P01733 135 aa2.92□□□□□ -1.94
RGPD4-201ENST00000408999 IGHV4-31P0DP07 118 aa2.92□□□□□ -1.94
RGPD4-201ENST00000408999 C1orf229Q6ZS94 237 aaPredicted RBP2.92□□□□□ -1.94
RGPD4-201ENST00000408999 MRAPQ8TCY5 172 aa2.92□□□□□ -1.94
RGPD4-201ENST00000408999 WIPF2Q8TF74 440 aaPredicted RBP2.92□□□□□ -1.94
RGPD4-201ENST00000408999 PYGO2Q9BRQ0 406 aa2.92□□□□□ -1.94
RGPD4-201ENST00000408999 U3KQE9 123 aa2.92□□□□□ -1.94
RGPD4-201ENST00000408999 KIR2DL5BA0A0G2JN68 375 aa2.92□□□□□ -1.94
RGPD4-201ENST00000408999 KIR2DL5BA0A0G2JPC4 375 aa2.92□□□□□ -1.94
RGPD4-201ENST00000408999 FSTL3O95633 263 aa2.92□□□□□ -1.94
RGPD4-201ENST00000408999 IGKV1-17P01599 117 aa2.92□□□□□ -1.94
RGPD4-201ENST00000408999 HLA-DRB4P13762 266 aa2.92□□□□□ -1.94
RGPD4-201ENST00000408999 SRSF2Q01130 221 aaKnown RBP2.92□□□□□ -1.94
RGPD4-201ENST00000408999 KIR2DL5AQ8N109 375 aa2.92□□□□□ -1.94
RGPD4-201ENST00000408999 C10orf126Q8N4M7 172 aa2.92□□□□□ -1.94
RGPD4-201ENST00000408999 HLA-DRB4X5D2U9 266 aa2.92□□□□□ -1.94
RGPD4-201ENST00000408999 C2orf70A6NJV1 201 aa2.92□□□□□ -1.94
RGPD4-201ENST00000408999 RNASE13Q5GAN3 156 aaKnown RBP2.92□□□□□ -1.94
RGPD4-201ENST00000408999 C11orf71Q6IPW1 123 aa2.92□□□□□ -1.94
RGPD4-201ENST00000408999 PRIMA1Q86XR5 153 aa2.92□□□□□ -1.94
RGPD4-201ENST00000408999 C16orf74Q96GX8 76 aa2.92□□□□□ -1.94
RGPD4-201ENST00000408999 SPAG8Q99932 426 aaPredicted RBP2.92□□□□□ -1.94
RGPD4-201ENST00000408999 SMIM2Q9BVW6 85 aa2.92□□□□□ -1.94
RGPD4-201ENST00000408999 MRPL36Q9P0J6 103 aaKnown RBP2.92□□□□□ -1.94
RGPD4-201ENST00000408999 TRAV8-2A0A0B4J237 113 aa2.92□□□□□ -1.94
RGPD4-201ENST00000408999 A0A0J9YY99 117 aa2.92□□□□□ -1.94
RGPD4-201ENST00000408999 PRSS29PA6NIE9 313 aa2.92□□□□□ -1.94
RGPD4-201ENST00000408999 GHRHP01286 108 aa2.92□□□□□ -1.94
RGPD4-201ENST00000408999 IGHG2P01859 326 aa2.92□□□□□ -1.94
RGPD4-201ENST00000408999 SPINK8P0C7L1 97 aa2.92□□□□□ -1.94
RGPD4-201ENST00000408999 LOXL1Q08397 574 aaPredicted RBP2.92□□□□□ -1.94
RGPD4-201ENST00000408999 KLF5Q13887 457 aaPredicted RBP2.92□□□□□ -1.94
RGPD4-201ENST00000408999 ATXN8Q156A1 80 aa2.92□□□□□ -1.94
RGPD4-201ENST00000408999 SUMO4Q6EEV6 95 aa2.92□□□□□ -1.94
RGPD4-201ENST00000408999 C20orf78Q9BR46 151 aa2.92□□□□□ -1.94
RGPD4-201ENST00000408999 LINC00574Q9H8X3 128 aa2.92□□□□□ -1.94
RGPD4-201ENST00000408999 PRAC2D3DTV9 90 aa2.91□□□□□ -1.94
RGPD4-201ENST00000408999 K7EQD1 137 aa2.91□□□□□ -1.94
RGPD4-201ENST00000408999 BUB3O43684 328 aa2.91□□□□□ -1.94
RGPD4-201ENST00000408999 EIF4EBP1Q13541 118 aaPredicted RBP2.91□□□□□ -1.94
RGPD4-201ENST00000408999 MPV17L2Q567V2 206 aa2.91□□□□□ -1.94
RGPD4-201ENST00000408999 CLPSL2Q6UWE3 100 aa2.91□□□□□ -1.94
RGPD4-201ENST00000408999 FAM167A-AS1Q96KT0 104 aa2.91□□□□□ -1.94
RGPD4-201ENST00000408999 JPT2Q9H910 190 aa2.91□□□□□ -1.94
RGPD4-201ENST00000408999 TMEM89A2RUT3 159 aa2.91□□□□□ -1.94
RGPD4-201ENST00000408999 P0C879 139 aa2.91□□□□□ -1.94
RGPD4-201ENST00000408999 LMO4P61968 165 aa2.91□□□□□ -1.94
RGPD4-201ENST00000408999 BOD1L2Q8IYS8 172 aa2.91□□□□□ -1.94
RGPD4-201ENST00000408999 ZMAT4Q9H898 229 aa2.91□□□□□ -1.94
RGPD4-201ENST00000408999 ZNF561-AS1K7EIQ3 104 aa2.91□□□□□ -1.94
RGPD4-201ENST00000408999 EIF4EBP3O60516 100 aaPredicted RBP2.91□□□□□ -1.94
RGPD4-201ENST00000408999 INSL3P51460 131 aa2.91□□□□□ -1.94
RGPD4-201ENST00000408999 RHOHQ15669 191 aa2.91□□□□□ -1.94
RGPD4-201ENST00000408999 RNF152Q8N8N0 203 aa2.91□□□□□ -1.94
RGPD4-201ENST00000408999 CCDC140Q96MF4 163 aa2.91□□□□□ -1.94
RGPD4-201ENST00000408999 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.91□□□□□ -1.94
RGPD4-201ENST00000408999 IGKV1OR2-108A0A075B7D4 117 aa2.91□□□□□ -1.94
RGPD4-201ENST00000408999 IGKV2-29A2NJV5 120 aaPredicted RBP2.91□□□□□ -1.94
RGPD4-201ENST00000408999 UNQ9165/PRO28630Q6UXU0 137 aa2.91□□□□□ -1.94
RGPD4-201ENST00000408999 Q6YL49 198 aa2.91□□□□□ -1.94
RGPD4-201ENST00000408999 ZNF625Q96I27 306 aaPredicted RBP2.91□□□□□ -1.94
RGPD4-201ENST00000408999 ZNF48Q96MX3 618 aaPredicted RBP2.91□□□□□ -1.94
RGPD4-201ENST00000408999 CITED2Q99967 270 aaPredicted RBP2.91□□□□□ -1.94
RGPD4-201ENST00000408999 LENEPQ9Y5L5 61 aa2.91□□□□□ -1.94
RGPD4-201ENST00000408999 GATA1P15976 413 aaPredicted RBP2.9□□□□□ -1.94
RGPD4-201ENST00000408999 BRWD1-AS2P59051 145 aa2.9□□□□□ -1.94
RGPD4-201ENST00000408999 C9orf47Q6ZRZ4 202 aa2.9□□□□□ -1.94
RGPD4-201ENST00000408999 RPL39LQ96EH5 51 aaKnown RBP2.9□□□□□ -1.94
RGPD4-201ENST00000408999 IGKV1D-37A0A075B6S9 117 aa2.9□□□□□ -1.94
RGPD4-201ENST00000408999 K7EMT4 169 aa2.9□□□□□ -1.94
RGPD4-201ENST00000408999 CD5LO43866 347 aa2.9□□□□□ -1.94
RGPD4-201ENST00000408999 LGALS9BQ3B8N2 356 aa2.9□□□□□ -1.94
RGPD4-201ENST00000408999 LGALS9CQ6DKI2 356 aa2.9□□□□□ -1.94
RGPD4-201ENST00000408999 HIST2H2BCQ6DN03 193 aa2.9□□□□□ -1.94
RGPD4-201ENST00000408999 Q6ZQT7 251 aa2.9□□□□□ -1.94
RGPD4-201ENST00000408999 GPHB5Q86YW7 130 aa2.9□□□□□ -1.94
RGPD4-201ENST00000408999 MUC2Q02817 5179 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms