RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 IGKV2D-24A0A075B6R9 120 aa6.05□□□□□ -1.44
SNORD88A-201ENST00000408314 TMEM262E9PQX1 116 aa6.05□□□□□ -1.44
SNORD88A-201ENST00000408314 KRTAP10-1P60331 282 aa6.05□□□□□ -1.44
SNORD88A-201ENST00000408314 BLOC1S1P78537 153 aa6.05□□□□□ -1.44
SNORD88A-201ENST00000408314 Q8N976 141 aa6.05□□□□□ -1.44
SNORD88A-201ENST00000408314 NEXN-AS1Q8NBZ9 246 aa6.05□□□□□ -1.44
SNORD88A-201ENST00000408314 TPPP3Q9BW30 176 aa6.05□□□□□ -1.44
SNORD88A-201ENST00000408314 C1orf43Q9BWL3 253 aa6.05□□□□□ -1.44
SNORD88A-201ENST00000408314 KLK12Q9UKR0 248 aa6.05□□□□□ -1.44
SNORD88A-201ENST00000408314 TRBV25-1A0A075B6N4 114 aa6.04□□□□□ -1.44
SNORD88A-201ENST00000408314 C19orf71A6NCJ1 209 aa6.04□□□□□ -1.44
SNORD88A-201ENST00000408314 FAM229AH3BQW9 127 aa6.04□□□□□ -1.44
SNORD88A-201ENST00000408314 MGPP08493 103 aa6.04□□□□□ -1.44
SNORD88A-201ENST00000408314 IGLC6P0CF74 106 aa6.04□□□□□ -1.44
SNORD88A-201ENST00000408314 Q6ZNX1 250 aa6.04□□□□□ -1.44
SNORD88A-201ENST00000408314 UBE2WQ96B02 151 aa6.04□□□□□ -1.44
SNORD88A-201ENST00000408314 CHCHD5Q9BSY4 110 aa6.04□□□□□ -1.44
SNORD88A-201ENST00000408314 Q9UF83 564 aa6.04□□□□□ -1.44
SNORD88A-201ENST00000408314 TMEM250H0YL14 139 aa6.03□□□□□ -1.44
SNORD88A-201ENST00000408314 FUSP35637 526 aaKnown RBP eCLIP6.03□□□□□ -1.44
SNORD88A-201ENST00000408314 XGP55808 180 aa6.03□□□□□ -1.44
SNORD88A-201ENST00000408314 MIAQ16674 131 aa6.03□□□□□ -1.44
SNORD88A-201ENST00000408314 WDR73Q6P4I2 378 aa6.03□□□□□ -1.44
SNORD88A-201ENST00000408314 ATRAIDQ6UW56 229 aa6.03□□□□□ -1.44
SNORD88A-201ENST00000408314 SMIM15Q7Z3B0 74 aa6.03□□□□□ -1.44
SNORD88A-201ENST00000408314 Q8N3U1 123 aa6.03□□□□□ -1.44
SNORD88A-201ENST00000408314 KRTAP4-5Q9BYR2 181 aa6.03□□□□□ -1.44
SNORD88A-201ENST00000408314 DPH3P1Q9H4G8 78 aa6.03□□□□□ -1.44
SNORD88A-201ENST00000408314 IGHV1-24A0A0C4DH33 117 aa6.02□□□□□ -1.45
SNORD88A-201ENST00000408314 MUC21A0A0G2JKD1 596 aa6.02□□□□□ -1.45
SNORD88A-201ENST00000408314 MUC21A0A140T8X8 626 aa6.02□□□□□ -1.45
SNORD88A-201ENST00000408314 RAB19A4D1S5 217 aa6.02□□□□□ -1.45
SNORD88A-201ENST00000408314 IGLV2-8P01709 118 aa6.02□□□□□ -1.45
SNORD88A-201ENST00000408314 ANGP03950 147 aaKnown RBP6.02□□□□□ -1.45
SNORD88A-201ENST00000408314 SSTP61278 116 aa6.02□□□□□ -1.45
SNORD88A-201ENST00000408314 Q5VSD8 79 aa6.02□□□□□ -1.45
SNORD88A-201ENST00000408314 RPP21Q9H633 154 aaKnown RBP6.02□□□□□ -1.45
SNORD88A-201ENST00000408314 KIF25-AS1Q9Y6Z4 181 aa6.02□□□□□ -1.45
SNORD88A-201ENST00000408314 TRBV20OR9-2A0A075B6H5 130 aa6.01□□□□□ -1.45
SNORD88A-201ENST00000408314 CTRLP40313 264 aa6.01□□□□□ -1.45
SNORD88A-201ENST00000408314 IQCJQ1A5X6 159 aa6.01□□□□□ -1.45
SNORD88A-201ENST00000408314 MPV17L2Q567V2 206 aa6.01□□□□□ -1.45
SNORD88A-201ENST00000408314 RASL11AQ6T310 242 aa6.01□□□□□ -1.45
SNORD88A-201ENST00000408314 C9orf62Q8N4C0 152 aa6.01□□□□□ -1.45
SNORD88A-201ENST00000408314 C15orf54Q8N8G6 183 aa6.01□□□□□ -1.45
SNORD88A-201ENST00000408314 BAALCQ8WXS3 180 aa6.01□□□□□ -1.45
SNORD88A-201ENST00000408314 IGLV2-33A0A075B6J2 118 aaPredicted RBP6□□□□□ -1.45
SNORD88A-201ENST00000408314 M0QY20 66 aa6□□□□□ -1.45
SNORD88A-201ENST00000408314 LECT2O14960 151 aa6□□□□□ -1.45
SNORD88A-201ENST00000408314 NDUFS6O75380 124 aaKnown RBP6□□□□□ -1.45
SNORD88A-201ENST00000408314 INAFM2P0DMQ5 153 aa6□□□□□ -1.45
SNORD88A-201ENST00000408314 GZMBP10144 247 aa6□□□□□ -1.45
SNORD88A-201ENST00000408314 SUMO4Q6EEV6 95 aa6□□□□□ -1.45
SNORD88A-201ENST00000408314 TEX261Q6UWH6 196 aa6□□□□□ -1.45
SNORD88A-201ENST00000408314 LYZL1Q6UWQ5 148 aa6□□□□□ -1.45
SNORD88A-201ENST00000408314 NUDT10Q8NFP7 164 aa6□□□□□ -1.45
SNORD88A-201ENST00000408314 BORCS7Q96B45 105 aa6□□□□□ -1.45
SNORD88A-201ENST00000408314 NUDT11Q96G61 164 aa6□□□□□ -1.45
SNORD88A-201ENST00000408314 PGLYRP4Q96LB8 373 aa6□□□□□ -1.45
SNORD88A-201ENST00000408314 NIT2Q9NQR4 276 aa6□□□□□ -1.45
SNORD88A-201ENST00000408314 UBE2L6O14933 153 aa5.99□□□□□ -1.45
SNORD88A-201ENST00000408314 PLA2G1BP04054 148 aaKnown RBP5.99□□□□□ -1.45
SNORD88A-201ENST00000408314 NTF3P20783 257 aa5.99□□□□□ -1.45
SNORD88A-201ENST00000408314 COTL1Q14019 142 aa5.99□□□□□ -1.45
SNORD88A-201ENST00000408314 WFDC2Q14508 124 aa5.99□□□□□ -1.45
SNORD88A-201ENST00000408314 TWIST1Q15672 202 aa5.99□□□□□ -1.45
SNORD88A-201ENST00000408314 ALKAL2Q6UX46 152 aa5.99□□□□□ -1.45
SNORD88A-201ENST00000408314 TMEM243Q9BU79 118 aa5.99□□□□□ -1.45
SNORD88A-201ENST00000408314 CNFNQ9BYD5 112 aa5.99□□□□□ -1.45
SNORD88A-201ENST00000408314 hCG_2014768A0A024R1R8 64 aa5.98□□□□□ -1.45
SNORD88A-201ENST00000408314 TRAV8-4A0A0B4J246 113 aa5.98□□□□□ -1.45
SNORD88A-201ENST00000408314 A8MWL6 223 aa5.98□□□□□ -1.45
SNORD88A-201ENST00000408314 GATCO43716 136 aaKnown RBP5.98□□□□□ -1.45
SNORD88A-201ENST00000408314 HLA-DQA1P01909 254 aa5.98□□□□□ -1.45
SNORD88A-201ENST00000408314 NKX2-5P52952 324 aaPredicted RBP5.98□□□□□ -1.45
SNORD88A-201ENST00000408314 RBX1P62877 108 aa5.98□□□□□ -1.45
SNORD88A-201ENST00000408314 GAGE6Q13070 117 aa5.98□□□□□ -1.45
SNORD88A-201ENST00000408314 CT83Q5H943 113 aa5.98□□□□□ -1.45
SNORD88A-201ENST00000408314 ENHOQ6UWT2 76 aa5.98□□□□□ -1.45
SNORD88A-201ENST00000408314 Q6ZSA8 131 aa5.98□□□□□ -1.45
SNORD88A-201ENST00000408314 FAM231DQ6ZW35 169 aa5.98□□□□□ -1.45
SNORD88A-201ENST00000408314 PRR34Q9NV39 138 aa5.98□□□□□ -1.45
SNORD88A-201ENST00000408314 A0A1B0GUV1 79 aa5.97□□□□□ -1.45
SNORD88A-201ENST00000408314 AMTP48728 403 aa5.97□□□□□ -1.45
SNORD88A-201ENST00000408314 NTM-AS1Q6ZSK4 140 aa5.97□□□□□ -1.45
SNORD88A-201ENST00000408314 CLRN3Q8NCR9 226 aa5.97□□□□□ -1.45
SNORD88A-201ENST00000408314 LYPD6BQ8NI32 183 aa5.97□□□□□ -1.45
SNORD88A-201ENST00000408314 OCC1Q8TAD7 63 aa5.97□□□□□ -1.45
SNORD88A-201ENST00000408314 FAM210AQ96ND0 272 aa5.97□□□□□ -1.45
SNORD88A-201ENST00000408314 EIF5A2Q9GZV4 153 aaKnown RBP5.97□□□□□ -1.45
SNORD88A-201ENST00000408314 RNASE7Q9H1E1 156 aaKnown RBP5.97□□□□□ -1.45
SNORD88A-201ENST00000408314 FAT1Q14517 4588 aa5.96□□□□□ -1.45
SNORD88A-201ENST00000408314 USP17L23D6RBM5 183 aa5.96□□□□□ -1.46
SNORD88A-201ENST00000408314 K7EN84 100 aa5.96□□□□□ -1.46
SNORD88A-201ENST00000408314 NCR2O95944 276 aa5.96□□□□□ -1.46
SNORD88A-201ENST00000408314 SMR3BP02814 79 aaPredicted RBP5.96□□□□□ -1.46
SNORD88A-201ENST00000408314 CEBPGP53567 150 aa5.96□□□□□ -1.46
SNORD88A-201ENST00000408314 REG3AQ06141 175 aa5.96□□□□□ -1.46
SNORD88A-201ENST00000408314 DGAT2L7PQ6IED9 249 aa5.96□□□□□ -1.46
SNORD88A-201ENST00000408314 LINC00269Q8N2A0 174 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms