RNA–Protein interactions for RNA: ENST00000405240.5

RTN4-209, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,061 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-209ENST00000405240 C21orf62-AS1Q17RA5 79 aa2.81□□□□□ -1.96
RTN4-209ENST00000405240 CD300EQ496F6 205 aaPredicted RBP2.81□□□□□ -1.96
RTN4-209ENST00000405240 GAGE13Q4V321 117 aa2.81□□□□□ -1.96
RTN4-209ENST00000405240 C4orf3Q8WVX3 66 aa2.81□□□□□ -1.96
RTN4-209ENST00000405240 IGLV5-45A0A087WSX0 123 aa2.81□□□□□ -1.96
RTN4-209ENST00000405240 SYNJ2BPP57105 145 aa2.81□□□□□ -1.96
RTN4-209ENST00000405240 RS1O15537 224 aa2.81□□□□□ -1.96
RTN4-209ENST00000405240 SPINK13Q1W4C9 94 aa2.81□□□□□ -1.96
RTN4-209ENST00000405240 TCTEX1D4Q5JR98 221 aa2.81□□□□□ -1.96
RTN4-209ENST00000405240 DNAJC30Q96LL9 226 aa2.81□□□□□ -1.96
RTN4-209ENST00000405240 BEX4Q9NWD9 120 aaPredicted RBP2.81□□□□□ -1.96
RTN4-209ENST00000405240 PGPEP1Q9NXJ5 209 aa2.81□□□□□ -1.96
RTN4-209ENST00000405240 SPTBN1Q01082 2364 aaKnown RBP2.81□□□□□ -1.96
RTN4-209ENST00000405240 MAP1BP46821 2468 aaKnown RBP2.8□□□□□ -1.96
RTN4-209ENST00000405240 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.8□□□□□ -1.963e-9■■■■■ 96.9
RTN4-209ENST00000405240 IGKV3-7A0A075B6H7 116 aa2.8□□□□□ -1.96
RTN4-209ENST00000405240 TRBV20-1A0A075B6N2 111 aa2.8□□□□□ -1.96
RTN4-209ENST00000405240 TINCRA0A1B0GVN0 87 aa2.8□□□□□ -1.96
RTN4-209ENST00000405240 C10orf126Q8N4M7 172 aa2.8□□□□□ -1.96
RTN4-209ENST00000405240 TMEM86BQ8N661 226 aa2.8□□□□□ -1.96
RTN4-209ENST00000405240 OPRPNQ99935 248 aaPredicted RBP2.8□□□□□ -1.96
RTN4-209ENST00000405240 C1QTNF4Q9BXJ3 329 aa2.8□□□□□ -1.96
RTN4-209ENST00000405240 SPANXDQ9BXN6 97 aa2.8□□□□□ -1.96
RTN4-209ENST00000405240 PPDPFQ9H3Y8 114 aa2.8□□□□□ -1.96
RTN4-209ENST00000405240 SPANXCQ9NY87 97 aa2.8□□□□□ -1.96
RTN4-209ENST00000405240 A8MWV9 139 aa2.8□□□□□ -1.96
RTN4-209ENST00000405240 TMEM238C9JI98 176 aa2.8□□□□□ -1.96
RTN4-209ENST00000405240 Q6ZSN1 163 aa2.8□□□□□ -1.96
RTN4-209ENST00000405240 NRGNQ92686 78 aa2.8□□□□□ -1.96
RTN4-209ENST00000405240 TIMM21Q9BVV7 248 aa2.8□□□□□ -1.96
RTN4-209ENST00000405240 UBE2D4Q9Y2X8 147 aa2.8□□□□□ -1.96
RTN4-209ENST00000405240 FBN2P35556 2912 aa2.8□□□□□ -1.96
RTN4-209ENST00000405240 GAGE12HA6NDE8 117 aa2.8□□□□□ -1.96
RTN4-209ENST00000405240 TIMM17BO60830 172 aa2.8□□□□□ -1.96
RTN4-209ENST00000405240 IGHV3-53P01767 116 aa2.8□□□□□ -1.96
RTN4-209ENST00000405240 IGHV3-33P01772 117 aa2.8□□□□□ -1.96
RTN4-209ENST00000405240 FOXI1Q12951 378 aa2.8□□□□□ -1.96
RTN4-209ENST00000405240 FHL3Q13643 280 aa2.8□□□□□ -1.96
RTN4-209ENST00000405240 ZNF56Q15929 161 aa2.8□□□□□ -1.96
RTN4-209ENST00000405240 C18orf65Q6ZTR6 163 aa2.8□□□□□ -1.96
RTN4-209ENST00000405240 SH2D6Q7Z4S9 175 aa2.8□□□□□ -1.96
RTN4-209ENST00000405240 CARD19Q96LW7 228 aa2.8□□□□□ -1.96
RTN4-209ENST00000405240 CDIP1Q9H305 208 aa2.8□□□□□ -1.96
RTN4-209ENST00000405240 SPANXA1Q9NS26 97 aa2.8□□□□□ -1.96
RTN4-209ENST00000405240 SELENOKQ9Y6D0 94 aa2.8□□□□□ -1.96
RTN4-209ENST00000405240 CELSR2Q9HCU4 2923 aa2.8□□□□□ -1.96
RTN4-209ENST00000405240 IGF2RP11717 2491 aa2.79□□□□□ -1.96
RTN4-209ENST00000405240 A0A0J9YXY3 114 aa2.79□□□□□ -1.96
RTN4-209ENST00000405240 TCL1BO95988 128 aa2.79□□□□□ -1.96
RTN4-209ENST00000405240 C4orf48Q5BLP8 95 aa2.79□□□□□ -1.96
RTN4-209ENST00000405240 SPXQ9BT56 116 aa2.79□□□□□ -1.96
RTN4-209ENST00000405240 MAP6D1Q9H9H5 199 aa2.79□□□□□ -1.96
RTN4-209ENST00000405240 PRO1854Q9UHT4 67 aa2.79□□□□□ -1.96
RTN4-209ENST00000405240 ATRXP46100 2492 aa2.79□□□□□ -1.96
RTN4-209ENST00000405240 TRAV25A0A0B4J276 109 aa2.79□□□□□ -1.96
RTN4-209ENST00000405240 IGHV1-58A0A0C4DH39 117 aa2.79□□□□□ -1.96
RTN4-209ENST00000405240 F5H697 171 aa2.79□□□□□ -1.96
RTN4-209ENST00000405240 SLURP1P55000 103 aa2.79□□□□□ -1.96
RTN4-209ENST00000405240 TIRAPP58753 221 aa2.79□□□□□ -1.96
RTN4-209ENST00000405240 DEFB114Q30KQ6 69 aa2.79□□□□□ -1.96
RTN4-209ENST00000405240 MRPL16Q9NX20 251 aaKnown RBP2.79□□□□□ -1.96
RTN4-209ENST00000405240 ZNF469Q96JG9 3925 aaPredicted RBP2.79□□□□□ -1.96
RTN4-209ENST00000405240 A0A0J9YXV3 536 aa2.79□□□□□ -1.96
RTN4-209ENST00000405240 KNCNA6PVL3 124 aa2.79□□□□□ -1.96
RTN4-209ENST00000405240 IGHV3-30-3P0DP02 117 aa2.79□□□□□ -1.96
RTN4-209ENST00000405240 INSL3P51460 131 aa2.79□□□□□ -1.96
RTN4-209ENST00000405240 EMP1P54849 157 aa2.79□□□□□ -1.96
RTN4-209ENST00000405240 PROK1P58294 105 aa2.79□□□□□ -1.96
RTN4-209ENST00000405240 ETDBQ3ZM63 59 aa2.79□□□□□ -1.96
RTN4-209ENST00000405240 SCGB1D4Q6XE38 83 aa2.79□□□□□ -1.96
RTN4-209ENST00000405240 SIGMAR1Q99720 223 aa2.79□□□□□ -1.96
RTN4-209ENST00000405240 DOPEY2Q9Y3R5 2298 aa2.79□□□□□ -1.96
RTN4-209ENST00000405240 TRBV30A0A0K0K1B3 111 aa2.78□□□□□ -1.96
RTN4-209ENST00000405240 TGFAP01135 160 aa2.78□□□□□ -1.96
RTN4-209ENST00000405240 LGALS3P17931 250 aaKnown RBP2.78□□□□□ -1.96
RTN4-209ENST00000405240 ZNF415Q09FC8 603 aa2.78□□□□□ -1.96
RTN4-209ENST00000405240 SRSF9Q13242 221 aaKnown RBP eCLIP2.78□□□□□ -1.96
RTN4-209ENST00000405240 TMEM170BQ5T4T1 132 aa2.78□□□□□ -1.96
RTN4-209ENST00000405240 FAM74A4Q5TZK3 123 aa2.78□□□□□ -1.96
RTN4-209ENST00000405240 LYRM7Q5U5X0 104 aa2.78□□□□□ -1.96
RTN4-209ENST00000405240 VSIG2Q96IQ7 327 aa2.78□□□□□ -1.96
RTN4-209ENST00000405240 PEMTQ9UBM1 199 aa2.78□□□□□ -1.96
RTN4-209ENST00000405240 Q9UF83 564 aa2.78□□□□□ -1.96
RTN4-209ENST00000405240 CSDC2Q9Y534 153 aaKnown RBP2.78□□□□□ -1.96
RTN4-209ENST00000405240 TSSC4Q9Y5U2 329 aaPredicted RBP2.78□□□□□ -1.96
RTN4-209ENST00000405240 CSMD2Q7Z408 3487 aa2.78□□□□□ -1.96
RTN4-209ENST00000405240 IGLV5-39A0A0G2JS06 123 aa2.78□□□□□ -1.96
RTN4-209ENST00000405240 A4D1N5 150 aa2.78□□□□□ -1.96
RTN4-209ENST00000405240 CD28P10747 220 aa2.78□□□□□ -1.96
RTN4-209ENST00000405240 AZU1P20160 251 aa2.78□□□□□ -1.96
RTN4-209ENST00000405240 RPL24P83731 157 aaKnown RBP2.78□□□□□ -1.96
RTN4-209ENST00000405240 ZFAND6Q6FIF0 208 aa2.78□□□□□ -1.96
RTN4-209ENST00000405240 TEN1Q86WV5 123 aa2.78□□□□□ -1.96
RTN4-209ENST00000405240 MUSTN1Q8IVN3 82 aa2.78□□□□□ -1.96
RTN4-209ENST00000405240 TMEM61Q8N0U2 210 aa2.78□□□□□ -1.96
RTN4-209ENST00000405240 VCX2Q9H322 139 aa2.78□□□□□ -1.96
RTN4-209ENST00000405240 CRYBG3Q68DQ2 2970 aa2.78□□□□□ -1.96
RTN4-209ENST00000405240 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.78□□□□□ -1.96
RTN4-209ENST00000405240 J3QR89 54 aa2.78□□□□□ -1.96
RTN4-209ENST00000405240 DEFB131AP59861 70 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms