RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 TAGLN2P37802 199 aaKnown RBP8.84□□□□□ -0.99
SDF4-203ENST00000403997 ELOBQ15370 118 aa8.84□□□□□ -0.99
SDF4-203ENST00000403997 C9orf62Q8N4C0 152 aa8.84□□□□□ -0.99
SDF4-203ENST00000403997 RMI2Q96E14 147 aa8.84□□□□□ -0.99
SDF4-203ENST00000403997 BIN3Q9NQY0 253 aa8.84□□□□□ -0.99
SDF4-203ENST00000403997 KIF25-AS1Q9Y6Z4 181 aa8.84□□□□□ -0.99
SDF4-203ENST00000403997 IGKV2D-24A0A075B6R9 120 aa8.83□□□□□ -1
SDF4-203ENST00000403997 TRBV6-8A0A0A6YYG3 113 aa8.83□□□□□ -1
SDF4-203ENST00000403997 LECT2O14960 151 aa8.83□□□□□ -1
SDF4-203ENST00000403997 MGPP08493 103 aa8.83□□□□□ -1
SDF4-203ENST00000403997 IGLC6P0CF74 106 aa8.83□□□□□ -1
SDF4-203ENST00000403997 CACNG7P62955 275 aa8.83□□□□□ -1
SDF4-203ENST00000403997 WFDC2Q14508 124 aa8.83□□□□□ -1
SDF4-203ENST00000403997 UBE2WQ96B02 151 aa8.83□□□□□ -1
SDF4-203ENST00000403997 DNAJC30Q96LL9 226 aa8.83□□□□□ -1
SDF4-203ENST00000403997 CHCHD7Q9BUK0 85 aa8.83□□□□□ -1
SDF4-203ENST00000403997 COX11Q9Y6N1 276 aa8.83□□□□□ -1
SDF4-203ENST00000403997 TRBV20OR9-2A0A075B6H5 130 aa8.82□□□□□ -1
SDF4-203ENST00000403997 EPM2AB3EWF7 344 aa8.82□□□□□ -1
SDF4-203ENST00000403997 F2Z2F3 143 aa8.82□□□□□ -1
SDF4-203ENST00000403997 BAALCQ8WXS3 180 aa8.82□□□□□ -1
SDF4-203ENST00000403997 BLOC1S1P78537 153 aa8.81□□□□□ -1
SDF4-203ENST00000403997 LYZL1Q6UWQ5 148 aa8.81□□□□□ -1
SDF4-203ENST00000403997 ALKAL2Q6UX46 152 aa8.81□□□□□ -1
SDF4-203ENST00000403997 NUDT10Q8NFP7 164 aa8.81□□□□□ -1
SDF4-203ENST00000403997 NUDT11Q96G61 164 aa8.81□□□□□ -1
SDF4-203ENST00000403997 CHCHD5Q9BSY4 110 aa8.81□□□□□ -1
SDF4-203ENST00000403997 TMEM97Q5BJF2 176 aa8.8□□□□□ -1
SDF4-203ENST00000403997 C15orf54Q8N8G6 183 aa8.8□□□□□ -1
SDF4-203ENST00000403997 OCC1Q8TAD7 63 aa8.8□□□□□ -1
SDF4-203ENST00000403997 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.79□□□□□ -1
SDF4-203ENST00000403997 H7C1H1 209 aa8.79□□□□□ -1
SDF4-203ENST00000403997 M0QY20 66 aa8.79□□□□□ -1
SDF4-203ENST00000403997 ANGP03950 147 aaKnown RBP8.79□□□□□ -1
SDF4-203ENST00000403997 TRGC1P0CF51 173 aa8.79□□□□□ -1
SDF4-203ENST00000403997 NTF3P20783 257 aa8.79□□□□□ -1
SDF4-203ENST00000403997 HAMPP81172 84 aa8.79□□□□□ -1
SDF4-203ENST00000403997 Q0VG73 95 aa8.79□□□□□ -1
SDF4-203ENST00000403997 SUMO4Q6EEV6 95 aa8.79□□□□□ -1
SDF4-203ENST00000403997 NTM-AS1Q6ZSK4 140 aa8.79□□□□□ -1
SDF4-203ENST00000403997 FRZBQ92765 325 aa8.79□□□□□ -1
SDF4-203ENST00000403997 TMEM70Q9BUB7 260 aa8.79□□□□□ -1
SDF4-203ENST00000403997 SMR3BP02814 79 aaPredicted RBP8.78□□□□□ -1
SDF4-203ENST00000403997 PKIAP61925 76 aa8.78□□□□□ -1
SDF4-203ENST00000403997 MPV17L2Q567V2 206 aa8.78□□□□□ -1
SDF4-203ENST00000403997 WDR73Q6P4I2 378 aa8.78□□□□□ -1
SDF4-203ENST00000403997 Q8N976 141 aa8.78□□□□□ -1
SDF4-203ENST00000403997 RNASE7Q9H1E1 156 aaKnown RBP8.78□□□□□ -1
SDF4-203ENST00000403997 RPP21Q9H633 154 aaKnown RBP8.78□□□□□ -1
SDF4-203ENST00000403997 TRBV25-1A0A075B6N4 114 aa8.77□□□□□ -1.01
SDF4-203ENST00000403997 K7EN84 100 aa8.77□□□□□ -1.01
SDF4-203ENST00000403997 CRPP02741 224 aa8.77□□□□□ -1.01
SDF4-203ENST00000403997 TWIST1Q15672 202 aa8.77□□□□□ -1.01
SDF4-203ENST00000403997 ATRAIDQ6UW56 229 aa8.77□□□□□ -1.01
SDF4-203ENST00000403997 ENHOQ6UWT2 76 aa8.77□□□□□ -1.01
SDF4-203ENST00000403997 C1orf43Q9BWL3 253 aa8.77□□□□□ -1.01
SDF4-203ENST00000403997 DPH3P1Q9H4G8 78 aa8.77□□□□□ -1.01
SDF4-203ENST00000403997 FAM30AQ9NZY2 134 aa8.77□□□□□ -1.01
SDF4-203ENST00000403997 TMEM250H0YL14 139 aa8.76□□□□□ -1.01
SDF4-203ENST00000403997 CTRLP40313 264 aa8.76□□□□□ -1.01
SDF4-203ENST00000403997 NKX2-5P52952 324 aaPredicted RBP8.76□□□□□ -1.01
SDF4-203ENST00000403997 CEBPGP53567 150 aa8.76□□□□□ -1.01
SDF4-203ENST00000403997 GAGE6Q13070 117 aa8.76□□□□□ -1.01
SDF4-203ENST00000403997 Q5VSD8 79 aa8.76□□□□□ -1.01
SDF4-203ENST00000403997 RASL11AQ6T310 242 aa8.76□□□□□ -1.01
SDF4-203ENST00000403997 LYPD6BQ8NI32 183 aa8.76□□□□□ -1.01
SDF4-203ENST00000403997 IGHV1-24A0A0C4DH33 117 aa8.75□□□□□ -1.01
SDF4-203ENST00000403997 NIT2Q9NQR4 276 aa8.75□□□□□ -1.01
SDF4-203ENST00000403997 FAM229AH3BQW9 127 aa8.74□□□□□ -1.01
SDF4-203ENST00000403997 RBX1P62877 108 aa8.74□□□□□ -1.01
SDF4-203ENST00000403997 IQCJQ1A5X6 159 aa8.74□□□□□ -1.01
SDF4-203ENST00000403997 EIF5A2Q9GZV4 153 aaKnown RBP8.74□□□□□ -1.01
SDF4-203ENST00000403997 GATCO43716 136 aaKnown RBP8.73□□□□□ -1.01
SDF4-203ENST00000403997 INAFM2P0DMQ5 153 aa8.73□□□□□ -1.01
SDF4-203ENST00000403997 MIAQ16674 131 aa8.73□□□□□ -1.01
SDF4-203ENST00000403997 LINC01620Q4KN68 170 aa8.73□□□□□ -1.01
SDF4-203ENST00000403997 CLPSL2Q6UWE3 100 aa8.73□□□□□ -1.01
SDF4-203ENST00000403997 LINC00269Q8N2A0 174 aa8.73□□□□□ -1.01
SDF4-203ENST00000403997 DEFB104AQ8WTQ1 72 aa8.73□□□□□ -1.01
SDF4-203ENST00000403997 TMEM243Q9BU79 118 aa8.73□□□□□ -1.01
SDF4-203ENST00000403997 CNFNQ9BYD5 112 aa8.73□□□□□ -1.01
SDF4-203ENST00000403997 A0A1B0GVG6 124 aa8.72□□□□□ -1.01
SDF4-203ENST00000403997 A8MWL6 223 aa8.72□□□□□ -1.01
SDF4-203ENST00000403997 C14orf177Q52M58 125 aa8.72□□□□□ -1.01
SDF4-203ENST00000403997 SMIM15Q7Z3B0 74 aa8.72□□□□□ -1.01
SDF4-203ENST00000403997 GTSF1Q8WW33 167 aa8.72□□□□□ -1.01
SDF4-203ENST00000403997 TRAV26-2A0A0B4J265 109 aa8.71□□□□□ -1.02
SDF4-203ENST00000403997 HLA-DQA1P01909 254 aa8.71□□□□□ -1.02
SDF4-203ENST00000403997 COTL1Q14019 142 aa8.71□□□□□ -1.02
SDF4-203ENST00000403997 Q6ZSA8 131 aa8.71□□□□□ -1.02
SDF4-203ENST00000403997 GATD1Q8NB37 220 aa8.71□□□□□ -1.02
SDF4-203ENST00000403997 PGLYRP4Q96LB8 373 aa8.71□□□□□ -1.02
SDF4-203ENST00000403997 PRR34Q9NV39 138 aa8.71□□□□□ -1.02
SDF4-203ENST00000403997 USP17L23D6RBM5 183 aa8.7□□□□□ -1.02
SDF4-203ENST00000403997 FOXA3P55318 350 aaPredicted RBP8.7□□□□□ -1.02
SDF4-203ENST00000403997 FAM231DQ6ZW35 169 aa8.7□□□□□ -1.02
SDF4-203ENST00000403997 SMIM7Q9BQ49 75 aa8.7□□□□□ -1.02
SDF4-203ENST00000403997 HERC1Q15751 4861 aa8.7□□□□□ -1.02
SDF4-203ENST00000403997 A0A1B0GUV1 79 aa8.69□□□□□ -1.02
SDF4-203ENST00000403997 ZNF727A8MUV8 499 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms