RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

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Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 ODF3Q96PU9 254 aa11.82□□□□□ -0.52
CHRFAM7A-203ENST00000401522 VPS25Q9BRG1 176 aa11.82□□□□□ -0.52
CHRFAM7A-203ENST00000401522 COL6A5A8TX70 2615 aa11.82□□□□□ -0.52
CHRFAM7A-203ENST00000401522 A0A1W2PRX2 142 aa11.81□□□□□ -0.52
CHRFAM7A-203ENST00000401522 LINC00315P59091 139 aa11.81□□□□□ -0.52
CHRFAM7A-203ENST00000401522 C3orf56Q8N813 242 aa11.81□□□□□ -0.52
CHRFAM7A-203ENST00000401522 NHP2Q9NX24 153 aaKnown RBP11.81□□□□□ -0.52
CHRFAM7A-203ENST00000401522 MYMXA0A1B0GTQ4 84 aa11.8□□□□□ -0.52
CHRFAM7A-203ENST00000401522 K7ERJ3 54 aa11.8□□□□□ -0.52
CHRFAM7A-203ENST00000401522 PRSS29PA6NIE9 313 aa11.8□□□□□ -0.52
CHRFAM7A-203ENST00000401522 C21orf62-AS1Q17RA5 79 aa11.8□□□□□ -0.52
CHRFAM7A-203ENST00000401522 DEFB136Q30KP8 78 aa11.8□□□□□ -0.52
CHRFAM7A-203ENST00000401522 MDFIQ99750 246 aa11.8□□□□□ -0.52
CHRFAM7A-203ENST00000401522 CYSLTR1Q9Y271 337 aa11.8□□□□□ -0.52
CHRFAM7A-203ENST00000401522 E9PLD3 99 aa11.79□□□□□ -0.52
CHRFAM7A-203ENST00000401522 EDN2P20800 178 aa11.79□□□□□ -0.52
CHRFAM7A-203ENST00000401522 NSUN5P1Q3KNT7 163 aa11.79□□□□□ -0.52
CHRFAM7A-203ENST00000401522 NEGR1Q7Z3B1 354 aa11.79□□□□□ -0.52
CHRFAM7A-203ENST00000401522 RAX2Q96IS3 184 aa11.79□□□□□ -0.52
CHRFAM7A-203ENST00000401522 HIST1H4GQ99525 98 aa11.79□□□□□ -0.52
CHRFAM7A-203ENST00000401522 FHL3Q13643 280 aa11.78□□□□□ -0.52
CHRFAM7A-203ENST00000401522 SHISA2Q6UWI4 295 aa11.78□□□□□ -0.52
CHRFAM7A-203ENST00000401522 TRBV7-3A0A075B6L6 115 aa11.78□□□□□ -0.52
CHRFAM7A-203ENST00000401522 CCL24O00175 119 aa11.78□□□□□ -0.52
CHRFAM7A-203ENST00000401522 VCYO14598 125 aa11.78□□□□□ -0.52
CHRFAM7A-203ENST00000401522 CD7P09564 240 aa11.78□□□□□ -0.52
CHRFAM7A-203ENST00000401522 SUMO4Q6EEV6 95 aa11.78□□□□□ -0.52
CHRFAM7A-203ENST00000401522 SELENOKQ9Y6D0 94 aa11.78□□□□□ -0.52
CHRFAM7A-203ENST00000401522 TRAV12-3A0A0B4J271 114 aa11.77□□□□□ -0.53
CHRFAM7A-203ENST00000401522 HOXD3P31249 432 aaPredicted RBP11.77□□□□□ -0.53
CHRFAM7A-203ENST00000401522 POLR2KP53803 58 aaKnown RBP11.77□□□□□ -0.53
CHRFAM7A-203ENST00000401522 SNRPD3P62318 126 aaKnown RBP11.77□□□□□ -0.53
CHRFAM7A-203ENST00000401522 C12orf74Q32Q52 190 aa11.77□□□□□ -0.53
CHRFAM7A-203ENST00000401522 PAPPA-AS1Q5QFB9 102 aa11.77□□□□□ -0.53
CHRFAM7A-203ENST00000401522 DUX3Q96PT4 197 aa11.77□□□□□ -0.53
CHRFAM7A-203ENST00000401522 IGLL5B9A064 214 aa11.76□□□□□ -0.53
CHRFAM7A-203ENST00000401522 SAP30O75446 220 aa11.76□□□□□ -0.53
CHRFAM7A-203ENST00000401522 TMEM141Q96I45 108 aa11.76□□□□□ -0.53
CHRFAM7A-203ENST00000401522 C9orf85Q96MD7 179 aa11.76□□□□□ -0.53
CHRFAM7A-203ENST00000401522 STAB1Q9NY15 2570 aa11.76□□□□□ -0.53
CHRFAM7A-203ENST00000401522 A0A0J9YX75 114 aa11.76□□□□□ -0.53
CHRFAM7A-203ENST00000401522 LGALS9O00182 355 aa11.76□□□□□ -0.53
CHRFAM7A-203ENST00000401522 ZFP2Q6ZN57 461 aa11.76□□□□□ -0.53
CHRFAM7A-203ENST00000401522 SYT8Q8NBV8 401 aa11.76□□□□□ -0.53
CHRFAM7A-203ENST00000401522 KIR2DL4Q99706 377 aa11.76□□□□□ -0.53
CHRFAM7A-203ENST00000401522 PRADC1Q9BSG0 188 aa11.76□□□□□ -0.53
CHRFAM7A-203ENST00000401522 IGHV3-16A0A0C4DH30 117 aa11.75□□□□□ -0.53
CHRFAM7A-203ENST00000401522 TRBV6-5A0A0K0K1A5 114 aa11.75□□□□□ -0.53
CHRFAM7A-203ENST00000401522 A0A1B0GWB2 263 aa11.75□□□□□ -0.53
CHRFAM7A-203ENST00000401522 K7EQG2 157 aa11.75□□□□□ -0.53
CHRFAM7A-203ENST00000401522 DUSP14O95147 198 aaKnown RBP11.75□□□□□ -0.53
CHRFAM7A-203ENST00000401522 ZNF688P0C7X2 276 aa11.75□□□□□ -0.53
CHRFAM7A-203ENST00000401522 KRTAP21-3Q3LHN1 58 aa11.75□□□□□ -0.53
CHRFAM7A-203ENST00000401522 TP53TG1Q9Y2A0 90 aa11.75□□□□□ -0.53
CHRFAM7A-203ENST00000401522 IGIPA6NJ69 53 aa11.74□□□□□ -0.53
CHRFAM7A-203ENST00000401522 G3V4G9 280 aa11.74□□□□□ -0.53
CHRFAM7A-203ENST00000401522 SLURP1P55000 103 aa11.74□□□□□ -0.53
CHRFAM7A-203ENST00000401522 JPT2Q9H910 190 aa11.74□□□□□ -0.53
CHRFAM7A-203ENST00000401522 A0A087WWL8 130 aa11.74□□□□□ -0.53
CHRFAM7A-203ENST00000401522 F5H697 171 aa11.74□□□□□ -0.53
CHRFAM7A-203ENST00000401522 PMVKQ15126 192 aa11.74□□□□□ -0.53
CHRFAM7A-203ENST00000401522 ZNF479Q96JC4 524 aa11.74□□□□□ -0.53
CHRFAM7A-203ENST00000401522 TIMM17AQ99595 171 aa11.74□□□□□ -0.53
CHRFAM7A-203ENST00000401522 TRBV27A0A0K0K1C4 114 aa11.73□□□□□ -0.53
CHRFAM7A-203ENST00000401522 TSHBP01222 138 aa11.73□□□□□ -0.53
CHRFAM7A-203ENST00000401522 CRYGDP07320 174 aa11.73□□□□□ -0.53
CHRFAM7A-203ENST00000401522 SYNJ2BPP57105 145 aa11.73□□□□□ -0.53
CHRFAM7A-203ENST00000401522 HERVK_113P61574 105 aa11.73□□□□□ -0.53
CHRFAM7A-203ENST00000401522 DLX4Q92988 240 aaPredicted RBP11.73□□□□□ -0.53
CHRFAM7A-203ENST00000401522 SDHAF1A6NFY7 115 aa11.72□□□□□ -0.53
CHRFAM7A-203ENST00000401522 ZNF815PA8K554 130 aa11.72□□□□□ -0.53
CHRFAM7A-203ENST00000401522 FOXI2Q6ZQN5 318 aa11.72□□□□□ -0.53
CHRFAM7A-203ENST00000401522 MUC4Q99102 2169 aa11.72□□□□□ -0.53
CHRFAM7A-203ENST00000401522 IGLV4-69A0A075B6H9 119 aa11.72□□□□□ -0.53
CHRFAM7A-203ENST00000401522 RRN3P1Q2M238 152 aa11.72□□□□□ -0.53
CHRFAM7A-203ENST00000401522 IGHV1OR15-1A0A075B7D0 117 aa11.71□□□□□ -0.53
CHRFAM7A-203ENST00000401522 C11orf86A6NJI1 115 aa11.7□□□□□ -0.54
CHRFAM7A-203ENST00000401522 PF4P02776 101 aa11.7□□□□□ -0.54
CHRFAM7A-203ENST00000401522 COTL1Q14019 142 aa11.7□□□□□ -0.54
CHRFAM7A-203ENST00000401522 MDFICQ9P1T7 246 aa11.7□□□□□ -0.54
CHRFAM7A-203ENST00000401522 TMEM238LA0A1B0GVL6 79 aa11.7□□□□□ -0.54
CHRFAM7A-203ENST00000401522 A6NJY4 79 aa11.7□□□□□ -0.54
CHRFAM7A-203ENST00000401522 RHOHQ15669 191 aa11.7□□□□□ -0.54
CHRFAM7A-203ENST00000401522 Q8N1Y9 231 aa11.7□□□□□ -0.54
CHRFAM7A-203ENST00000401522 LINC00482Q8N8I6 264 aa11.7□□□□□ -0.54
CHRFAM7A-203ENST00000401522 TRAV12-2A0A075B6T6 113 aa11.69□□□□□ -0.54
CHRFAM7A-203ENST00000401522 F8W1H4 67 aa11.69□□□□□ -0.54
CHRFAM7A-203ENST00000401522 M0QY20 66 aa11.69□□□□□ -0.54
CHRFAM7A-203ENST00000401522 IGKV3-20P01619 116 aa11.69□□□□□ -0.54
CHRFAM7A-203ENST00000401522 ZNF56Q15929 161 aa11.69□□□□□ -0.54
CHRFAM7A-203ENST00000401522 FAM74A4Q5TZK3 123 aa11.69□□□□□ -0.54
CHRFAM7A-203ENST00000401522 SCGB1D4Q6XE38 83 aa11.69□□□□□ -0.54
CHRFAM7A-203ENST00000401522 TRPT1Q86TN4 253 aaKnown RBP11.69□□□□□ -0.54
CHRFAM7A-203ENST00000401522 PEMTQ9UBM1 199 aa11.69□□□□□ -0.54
CHRFAM7A-203ENST00000401522 RPL39P62891 51 aaKnown RBP11.68□□□□□ -0.54
CHRFAM7A-203ENST00000401522 CD300EQ496F6 205 aaPredicted RBP11.68□□□□□ -0.54
CHRFAM7A-203ENST00000401522 TRGV11A0A075B6L2 103 aa11.68□□□□□ -0.54
CHRFAM7A-203ENST00000401522 SPINK13Q1W4C9 94 aa11.68□□□□□ -0.54
CHRFAM7A-203ENST00000401522 ZNF876PQ49A33 203 aa11.68□□□□□ -0.54
CHRFAM7A-203ENST00000401522 MORN3Q6PF18 240 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms