RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 SH2D1AO60880 128 aa11.15□□□□□ -0.62
UFD1-202ENST00000399523 RPL12P30050 165 aaKnown RBP11.15□□□□□ -0.62
UFD1-202ENST00000399523 ZNF56Q15929 161 aa11.15□□□□□ -0.62
UFD1-202ENST00000399523 Q86TA4 180 aa11.15□□□□□ -0.62
UFD1-202ENST00000399523 PPP1R1CQ8WVI7 109 aa11.15□□□□□ -0.62
UFD1-202ENST00000399523 TMEM167BQ9NRX6 74 aa11.15□□□□□ -0.62
UFD1-202ENST00000399523 LINC01559Q495D7 138 aa11.14□□□□□ -0.63
UFD1-202ENST00000399523 FAM162BQ5T6X4 162 aa11.14□□□□□ -0.63
UFD1-202ENST00000399523 Q6ZRP5 223 aa11.14□□□□□ -0.63
UFD1-202ENST00000399523 C15orf56Q8N910 161 aa11.14□□□□□ -0.63
UFD1-202ENST00000399523 A0A1W2PRE2 83 aa11.13□□□□□ -0.63
UFD1-202ENST00000399523 H7C1H1 209 aa11.13□□□□□ -0.63
UFD1-202ENST00000399523 RAB5CP51148 216 aa11.13□□□□□ -0.63
UFD1-202ENST00000399523 TMSB15BA0A087X1C1 80 aa11.12□□□□□ -0.63
UFD1-202ENST00000399523 A0A1B0GUV1 79 aa11.12□□□□□ -0.63
UFD1-202ENST00000399523 FAM240BA0A1B0GVZ2 78 aa11.12□□□□□ -0.63
UFD1-202ENST00000399523 IFNA7P01567 189 aa11.12□□□□□ -0.63
UFD1-202ENST00000399523 LCE2AQ5TA79 106 aaPredicted RBP11.12□□□□□ -0.63
UFD1-202ENST00000399523 CFAP161Q6P656 301 aa11.12□□□□□ -0.63
UFD1-202ENST00000399523 GFRA4Q9GZZ7 299 aa11.12□□□□□ -0.63
UFD1-202ENST00000399523 A0A096LNI7 61 aa11.11□□□□□ -0.63
UFD1-202ENST00000399523 IGHV1-24A0A0C4DH33 117 aa11.11□□□□□ -0.63
UFD1-202ENST00000399523 FAM231BA6NCW3 169 aa11.11□□□□□ -0.63
UFD1-202ENST00000399523 MPC2O95563 127 aa11.11□□□□□ -0.63
UFD1-202ENST00000399523 CXorf1O96002 111 aa11.11□□□□□ -0.63
UFD1-202ENST00000399523 H2BFSP57053 126 aa11.11□□□□□ -0.63
UFD1-202ENST00000399523 ZNF674Q2M3X9 581 aa11.11□□□□□ -0.63
UFD1-202ENST00000399523 ZFP30Q9Y2G7 519 aa11.11□□□□□ -0.63
UFD1-202ENST00000399523 IGLV4-60A0A075B6I1 120 aa11.1□□□□□ -0.63
UFD1-202ENST00000399523 PEX7O00628 323 aa11.1□□□□□ -0.63
UFD1-202ENST00000399523 LINC00474Q9P2X8 69 aa11.1□□□□□ -0.63
UFD1-202ENST00000399523 PET100P0DJ07 73 aa11.09□□□□□ -0.63
UFD1-202ENST00000399523 OR10AG1Q8NH19 301 aa11.09□□□□□ -0.63
UFD1-202ENST00000399523 F5H697 171 aa11.08□□□□□ -0.64
UFD1-202ENST00000399523 AQP10Q96PS8 301 aa11.08□□□□□ -0.64
UFD1-202ENST00000399523 ZNF471Q9BX82 626 aaPredicted RBP11.08□□□□□ -0.64
UFD1-202ENST00000399523 HIGD2BQ4VC39 106 aa11.07□□□□□ -0.64
UFD1-202ENST00000399523 ZNF664Q8N3J9 261 aa11.07□□□□□ -0.64
UFD1-202ENST00000399523 HIST1H2BAQ96A08 127 aa11.07□□□□□ -0.64
UFD1-202ENST00000399523 MBP02144 154 aa11.06□□□□□ -0.64
UFD1-202ENST00000399523 PSMG3Q9BT73 122 aaPredicted RBP11.06□□□□□ -0.64
UFD1-202ENST00000399523 PSORS1C2Q9UIG4 136 aa11.06□□□□□ -0.64
UFD1-202ENST00000399523 GAGE12HA6NDE8 117 aa11.05□□□□□ -0.64
UFD1-202ENST00000399523 INO80EQ8NBZ0 244 aaPredicted RBP11.05□□□□□ -0.64
UFD1-202ENST00000399523 TMEM243Q9BU79 118 aa11.05□□□□□ -0.64
UFD1-202ENST00000399523 ACTR3CQ9C0K3 210 aaPredicted RBP11.05□□□□□ -0.64
UFD1-202ENST00000399523 GVQW2A0A096LPI5 108 aaPredicted RBP11.04□□□□□ -0.64
UFD1-202ENST00000399523 A6NHS1 94 aa11.04□□□□□ -0.64
UFD1-202ENST00000399523 ATP6V0CP27449 155 aa11.04□□□□□ -0.64
UFD1-202ENST00000399523 SERF2P84101 59 aa11.04□□□□□ -0.64
UFD1-202ENST00000399523 MZT2BQ6NZ67 158 aa11.04□□□□□ -0.64
UFD1-202ENST00000399523 FMC1Q96HJ9 113 aa11.04□□□□□ -0.64
UFD1-202ENST00000399523 SSBP4Q9BWG4 385 aaPredicted RBP11.04□□□□□ -0.64
UFD1-202ENST00000399523 NKX6-2Q9C056 277 aaPredicted RBP11.04□□□□□ -0.64
UFD1-202ENST00000399523 SNAI2O43623 268 aa11.03□□□□□ -0.64
UFD1-202ENST00000399523 CXCL1P09341 107 aa11.03□□□□□ -0.64
UFD1-202ENST00000399523 SULT1A2P50226 295 aa11.03□□□□□ -0.64
UFD1-202ENST00000399523 CCDC32Q9BV29 185 aa11.03□□□□□ -0.64
UFD1-202ENST00000399523 LTAP01374 205 aa11.02□□□□□ -0.65
UFD1-202ENST00000399523 UBE2G2P60604 165 aa11.02□□□□□ -0.65
UFD1-202ENST00000399523 TNFSF18Q9UNG2 199 aa11.02□□□□□ -0.65
UFD1-202ENST00000399523 PKIGQ9Y2B9 76 aa11.02□□□□□ -0.65
UFD1-202ENST00000399523 TRAV26-2A0A0B4J265 109 aa11.01□□□□□ -0.65
UFD1-202ENST00000399523 FAM74A7A6NL05 159 aa11.01□□□□□ -0.65
UFD1-202ENST00000399523 M0QY20 66 aa11.01□□□□□ -0.65
UFD1-202ENST00000399523 OR5AL1P0C617 328 aa11.01□□□□□ -0.65
UFD1-202ENST00000399523 SPANXN1Q5VSR9 72 aa11.01□□□□□ -0.65
UFD1-202ENST00000399523 MUC21A0A140T8X8 626 aa11□□□□□ -0.65
UFD1-202ENST00000399523 UBE2G1P62253 170 aa11□□□□□ -0.65
UFD1-202ENST00000399523 SMIM17P0DL12 118 aa10.99□□□□□ -0.65
UFD1-202ENST00000399523 CACNG7P62955 275 aa10.99□□□□□ -0.65
UFD1-202ENST00000399523 PRR26Q8N8Z3 221 aa10.99□□□□□ -0.65
UFD1-202ENST00000399523 ZNF726P1Q15940 193 aa10.98□□□□□ -0.65
UFD1-202ENST00000399523 CHCHD10Q8WYQ3 142 aaPredicted RBP10.98□□□□□ -0.65
UFD1-202ENST00000399523 PGLYRP4Q96LB8 373 aa10.98□□□□□ -0.65
UFD1-202ENST00000399523 AP1S3Q96PC3 154 aa10.97□□□□□ -0.65
UFD1-202ENST00000399523 UBE2L6O14933 153 aa10.96□□□□□ -0.65
UFD1-202ENST00000399523 NKX2-5P52952 324 aaPredicted RBP10.96□□□□□ -0.65
UFD1-202ENST00000399523 DEFA3P59666 94 aa10.96□□□□□ -0.65
UFD1-202ENST00000399523 ENKURQ8TC29 256 aa10.96□□□□□ -0.65
UFD1-202ENST00000399523 IGKV3OR2-268A0A0C4DH90 116 aa10.95□□□□□ -0.66
UFD1-202ENST00000399523 CTXND1A0A1B0GTU2 59 aa10.95□□□□□ -0.66
UFD1-202ENST00000399523 SSTP61278 116 aa10.95□□□□□ -0.66
UFD1-202ENST00000399523 PRR4Q16378 134 aa10.95□□□□□ -0.66
UFD1-202ENST00000399523 SUMO4Q6EEV6 95 aa10.95□□□□□ -0.66
UFD1-202ENST00000399523 MED28Q9H204 178 aa10.95□□□□□ -0.66
UFD1-202ENST00000399523 INMT-MINDY4F8WBC2 141 aa10.94□□□□□ -0.66
UFD1-202ENST00000399523 FOXI1Q12951 378 aa10.94□□□□□ -0.66
UFD1-202ENST00000399523 CARD19Q96LW7 228 aa10.94□□□□□ -0.66
UFD1-202ENST00000399523 TCEAL7Q9BRU2 100 aa10.94□□□□□ -0.66
UFD1-202ENST00000399523 SSNA1O43805 119 aa10.93□□□□□ -0.66
UFD1-202ENST00000399523 PTTG1IPP53801 180 aa10.93□□□□□ -0.66
UFD1-202ENST00000399523 A0A1W2PNN7 141 aa10.92□□□□□ -0.66
UFD1-202ENST00000399523 MT-ND6P03923 174 aa10.92□□□□□ -0.66
UFD1-202ENST00000399523 MGPP08493 103 aa10.92□□□□□ -0.66
UFD1-202ENST00000399523 AMTP48728 403 aa10.92□□□□□ -0.66
UFD1-202ENST00000399523 FHITP49789 147 aa10.92□□□□□ -0.66
UFD1-202ENST00000399523 RASL11AQ6T310 242 aa10.92□□□□□ -0.66
UFD1-202ENST00000399523 AKR1C3P42330 323 aa10.91□□□□□ -0.66
UFD1-202ENST00000399523 FER1L6-AS1Q8NA97 138 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms