RNA–Protein interactions for RNA: ENST00000398741.5

PRAME-201, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-201ENST00000398741 TGFAP01135 160 aa9.69□□□□□ -0.86
PRAME-201ENST00000398741 HOXD3P31249 432 aaPredicted RBP9.69□□□□□ -0.86
PRAME-201ENST00000398741 PRO0461Q9UI25 63 aa9.69□□□□□ -0.86
PRAME-201ENST00000398741 ELANEP08246 267 aa9.68□□□□□ -0.86
PRAME-201ENST00000398741 LYRM7Q5U5X0 104 aa9.68□□□□□ -0.86
PRAME-201ENST00000398741 OPRPNQ99935 248 aaPredicted RBP9.68□□□□□ -0.86
PRAME-201ENST00000398741 CSMD2Q7Z408 3487 aa9.68□□□□□ -0.86
PRAME-201ENST00000398741 SFTA2Q6UW10 78 aa9.68□□□□□ -0.86
PRAME-201ENST00000398741 NFE4Q86UQ8 179 aa9.68□□□□□ -0.86
PRAME-201ENST00000398741 VPREB3Q9UKI3 123 aa9.68□□□□□ -0.86
PRAME-201ENST00000398741 TSSC4Q9Y5U2 329 aaPredicted RBP9.68□□□□□ -0.86
PRAME-201ENST00000398741 FBN2P35556 2912 aa9.67□□□□□ -0.86
PRAME-201ENST00000398741 PSMB2P49721 201 aa9.67□□□□□ -0.86
PRAME-201ENST00000398741 NDUFA11Q86Y39 141 aa9.67□□□□□ -0.86
PRAME-201ENST00000398741 SLC25A29Q8N8R3 303 aa9.67□□□□□ -0.86
PRAME-201ENST00000398741 C20orf203Q8NBC4 194 aa9.67□□□□□ -0.86
PRAME-201ENST00000398741 DOPEY2Q9Y3R5 2298 aa9.67□□□□□ -0.86
PRAME-201ENST00000398741 IGHV3-30P01768 117 aa9.67□□□□□ -0.86
PRAME-201ENST00000398741 IGHV3-30-5P0DP03 117 aa9.67□□□□□ -0.86
PRAME-201ENST00000398741 HTN1P15515 57 aa9.67□□□□□ -0.86
PRAME-201ENST00000398741 MAPK1IP1LQ8NDC0 245 aa9.67□□□□□ -0.86
PRAME-201ENST00000398741 UBE2E2Q96LR5 201 aa9.67□□□□□ -0.86
PRAME-201ENST00000398741 P0DMU3 169 aa9.66□□□□□ -0.86
PRAME-201ENST00000398741 FAM231AP0DMU4 169 aa9.66□□□□□ -0.86
PRAME-201ENST00000398741 FAM231CP0DMU5 169 aa9.66□□□□□ -0.86
PRAME-201ENST00000398741 TCTEX1D4Q5JR98 221 aa9.66□□□□□ -0.86
PRAME-201ENST00000398741 SPAG8Q99932 426 aaPredicted RBP9.66□□□□□ -0.86
PRAME-201ENST00000398741 GAGE12HA6NDE8 117 aa9.66□□□□□ -0.86
PRAME-201ENST00000398741 TMEM238C9JI98 176 aa9.66□□□□□ -0.86
PRAME-201ENST00000398741 LEPROTO15243 131 aa9.66□□□□□ -0.86
PRAME-201ENST00000398741 SIGMAR1Q99720 223 aa9.66□□□□□ -0.86
PRAME-201ENST00000398741 VCX2Q9H322 139 aa9.66□□□□□ -0.86
PRAME-201ENST00000398741 NBPF19A0A087WUL8 3843 aa9.65□□□□□ -0.86
PRAME-201ENST00000398741 USP9YO00507 2555 aaPredicted RBP9.65□□□□□ -0.86
PRAME-201ENST00000398741 TMEM223A0PJW6 202 aa9.65□□□□□ -0.86
PRAME-201ENST00000398741 KNCNA6PVL3 124 aa9.65□□□□□ -0.86
PRAME-201ENST00000398741 GTSF1LQ9H1H1 148 aa9.65□□□□□ -0.86
PRAME-201ENST00000398741 HECTD1Q9ULT8 2610 aa9.65□□□□□ -0.86
PRAME-201ENST00000398741 CELSR2Q9HCU4 2923 aa9.65□□□□□ -0.87
PRAME-201ENST00000398741 UBE2D3P61077 147 aa9.64□□□□□ -0.87
PRAME-201ENST00000398741 UBE2D2P62837 147 aa9.64□□□□□ -0.87
PRAME-201ENST00000398741 CFAP126Q5VTH2 177 aa9.64□□□□□ -0.87
PRAME-201ENST00000398741 RNF152Q8N8N0 203 aa9.64□□□□□ -0.87
PRAME-201ENST00000398741 AMELXQ99217 191 aa9.64□□□□□ -0.87
PRAME-201ENST00000398741 ZNF702PQ9H963 129 aa9.64□□□□□ -0.87
PRAME-201ENST00000398741 IGLV4-3A0A075B6K6 122 aa9.64□□□□□ -0.87
PRAME-201ENST00000398741 IGHV3-64A0A075B6Q5 118 aa9.64□□□□□ -0.87
PRAME-201ENST00000398741 IGHV3-73A0A0B4J1V6 119 aa9.64□□□□□ -0.87
PRAME-201ENST00000398741 RHODO00212 210 aa9.64□□□□□ -0.87
PRAME-201ENST00000398741 CFC1BP0CG36 223 aa9.64□□□□□ -0.87
PRAME-201ENST00000398741 CFC1P0CG37 223 aa9.64□□□□□ -0.87
PRAME-201ENST00000398741 ZNF22P17026 224 aaPredicted RBP9.64□□□□□ -0.87
PRAME-201ENST00000398741 PTPN13Q12923 2485 aa9.64□□□□□ -0.87
PRAME-201ENST00000398741 A0A096LNT2 108 aa9.63□□□□□ -0.87
PRAME-201ENST00000398741 AZU1P20160 251 aa9.63□□□□□ -0.87
PRAME-201ENST00000398741 DEFB131AP59861 70 aa9.63□□□□□ -0.87
PRAME-201ENST00000398741 C10orf126Q8N4M7 172 aa9.63□□□□□ -0.87
PRAME-201ENST00000398741 ZNF418Q8TF45 676 aaPredicted RBP9.63□□□□□ -0.87
PRAME-201ENST00000398741 FLNBO75369 2602 aaKnown RBP9.63□□□□□ -0.87
PRAME-201ENST00000398741 BAHCC1Q9P281 2608 aa9.63□□□□□ -0.87
PRAME-201ENST00000398741 A0A0J9YXV3 536 aa9.63□□□□□ -0.87
PRAME-201ENST00000398741 RBMY1A1P0DJD3 496 aaKnown RBP9.63□□□□□ -0.87
PRAME-201ENST00000398741 RBMY1CP0DJD4 496 aa9.63□□□□□ -0.87
PRAME-201ENST00000398741 CD28P10747 220 aa9.63□□□□□ -0.87
PRAME-201ENST00000398741 RBMY1FQ15415 496 aaKnown RBP9.63□□□□□ -0.87
PRAME-201ENST00000398741 Q6YL49 198 aa9.63□□□□□ -0.87
PRAME-201ENST00000398741 C1QTNF4Q9BXJ3 329 aa9.63□□□□□ -0.87
PRAME-201ENST00000398741 SCGB1C2P0DMR2 95 aa9.62□□□□□ -0.87
PRAME-201ENST00000398741 INSL3P51460 131 aa9.62□□□□□ -0.87
PRAME-201ENST00000398741 SLURP1P55000 103 aa9.62□□□□□ -0.87
PRAME-201ENST00000398741 ATP6V0E2Q8NHE4 81 aa9.62□□□□□ -0.87
PRAME-201ENST00000398741 DUX3Q96PT4 197 aa9.62□□□□□ -0.87
PRAME-201ENST00000398741 SPATA25Q9BR10 227 aa9.62□□□□□ -0.87
PRAME-201ENST00000398741 BEX4Q9NWD9 120 aaPredicted RBP9.62□□□□□ -0.87
PRAME-201ENST00000398741 PRO1854Q9UHT4 67 aa9.62□□□□□ -0.87
PRAME-201ENST00000398741 TNFRSF18Q9Y5U5 241 aa9.62□□□□□ -0.87
PRAME-201ENST00000398741 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.62□□□□□ -0.875e-19■■■□□ 17.5
PRAME-201ENST00000398741 TRBV20-1A0A075B6N2 111 aa9.62□□□□□ -0.87
PRAME-201ENST00000398741 SMAGPQ0VAQ4 97 aa9.62□□□□□ -0.87
PRAME-201ENST00000398741 DEFB136Q30KP8 78 aa9.62□□□□□ -0.87
PRAME-201ENST00000398741 SPG11Q96JI7 2443 aa9.61□□□□□ -0.87
PRAME-201ENST00000398741 TRAV2A0A0B4J234 112 aa9.61□□□□□ -0.87
PRAME-201ENST00000398741 EDA2RQ9HAV5 297 aa9.61□□□□□ -0.87
PRAME-201ENST00000398741 A8MWV9 139 aa9.6□□□□□ -0.87
PRAME-201ENST00000398741 TCL1BO95988 128 aa9.6□□□□□ -0.87
PRAME-201ENST00000398741 SCGB1A1P11684 91 aa9.6□□□□□ -0.87
PRAME-201ENST00000398741 SMCPP49901 116 aaPredicted RBP9.6□□□□□ -0.87
PRAME-201ENST00000398741 KRTAP10-9P60411 292 aa9.6□□□□□ -0.87
PRAME-201ENST00000398741 FOXI1Q12951 378 aa9.6□□□□□ -0.87
PRAME-201ENST00000398741 SETXQ7Z333 2677 aaKnown RBP9.6□□□□□ -0.87
PRAME-201ENST00000398741 MAP1AP78559 2803 aaPredicted RBP9.6□□□□□ -0.87
PRAME-201ENST00000398741 A4D1N5 150 aa9.6□□□□□ -0.87
PRAME-201ENST00000398741 H3BMM0 161 aa9.6□□□□□ -0.87
PRAME-201ENST00000398741 M0R2P5 195 aa9.6□□□□□ -0.87
PRAME-201ENST00000398741 PROK1P58294 105 aa9.6□□□□□ -0.87
PRAME-201ENST00000398741 ZNF415Q09FC8 603 aa9.6□□□□□ -0.87
PRAME-201ENST00000398741 SVIPQ8NHG7 77 aa9.6□□□□□ -0.87
PRAME-201ENST00000398741 PYGO1Q9Y3Y4 419 aa9.6□□□□□ -0.87
PRAME-201ENST00000398741 C18orf65Q6ZTR6 163 aa9.59□□□□□ -0.87
PRAME-201ENST00000398741 SPXQ9BT56 116 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms