RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 Q6ZNX1 250 aa8.9□□□□□ -0.98
VCX3A-202ENST00000398729 FER1L6-AS1Q8NA97 138 aa8.9□□□□□ -0.98
VCX3A-202ENST00000398729 OR2D3Q8NGH3 330 aa8.9□□□□□ -0.98
VCX3A-202ENST00000398729 TPPP3Q9BW30 176 aa8.9□□□□□ -0.98
VCX3A-202ENST00000398729 BIN3Q9NQY0 253 aa8.9□□□□□ -0.98
VCX3A-202ENST00000398729 MED9Q9NWA0 146 aa8.9□□□□□ -0.98
VCX3A-202ENST00000398729 VAX2Q9UIW0 290 aa8.9□□□□□ -0.98
VCX3A-202ENST00000398729 KLK12Q9UKR0 248 aa8.9□□□□□ -0.98
VCX3A-202ENST00000398729 HMCN2Q8NDA2 5059 aa8.9□□□□□ -0.98
VCX3A-202ENST00000398729 TRBV6-8A0A0A6YYG3 113 aa8.89□□□□□ -0.99
VCX3A-202ENST00000398729 XKRY2A2RUG3 117 aa8.89□□□□□ -0.99
VCX3A-202ENST00000398729 C19orf71A6NCJ1 209 aa8.89□□□□□ -0.99
VCX3A-202ENST00000398729 GZMBP10144 247 aa8.89□□□□□ -0.99
VCX3A-202ENST00000398729 TAGLN2P37802 199 aaKnown RBP8.89□□□□□ -0.99
VCX3A-202ENST00000398729 TMEM70Q9BUB7 260 aa8.89□□□□□ -0.99
VCX3A-202ENST00000398729 IGKV2D-24A0A075B6R9 120 aa8.88□□□□□ -0.99
VCX3A-202ENST00000398729 RBFOX3A6NFN3 312 aa8.88□□□□□ -0.99
VCX3A-202ENST00000398729 TMEM262E9PQX1 116 aa8.88□□□□□ -0.99
VCX3A-202ENST00000398729 P01737 135 aa8.88□□□□□ -0.99
VCX3A-202ENST00000398729 IGLC6P0CF74 106 aa8.88□□□□□ -0.99
VCX3A-202ENST00000398729 CACNG7P62955 275 aa8.88□□□□□ -0.99
VCX3A-202ENST00000398729 WFDC2Q14508 124 aa8.88□□□□□ -0.99
VCX3A-202ENST00000398729 AKAP14Q86UN6 197 aa8.88□□□□□ -0.99
VCX3A-202ENST00000398729 FRZBQ92765 325 aa8.88□□□□□ -0.99
VCX3A-202ENST00000398729 UBE2WQ96B02 151 aa8.88□□□□□ -0.99
VCX3A-202ENST00000398729 KIF25-AS1Q9Y6Z4 181 aa8.88□□□□□ -0.99
VCX3A-202ENST00000398729 TRBV20OR9-2A0A075B6H5 130 aa8.87□□□□□ -0.99
VCX3A-202ENST00000398729 F2Z2F3 143 aa8.87□□□□□ -0.99
VCX3A-202ENST00000398729 LECT2O14960 151 aa8.87□□□□□ -0.99
VCX3A-202ENST00000398729 PKIAP61925 76 aa8.87□□□□□ -0.99
VCX3A-202ENST00000398729 Q0VG73 95 aa8.87□□□□□ -0.99
VCX3A-202ENST00000398729 TMEM97Q5BJF2 176 aa8.87□□□□□ -0.99
VCX3A-202ENST00000398729 BAALCQ8WXS3 180 aa8.87□□□□□ -0.99
VCX3A-202ENST00000398729 H7C1H1 209 aa8.86□□□□□ -0.99
VCX3A-202ENST00000398729 SMR3BP02814 79 aaPredicted RBP8.86□□□□□ -0.99
VCX3A-202ENST00000398729 MGPP08493 103 aa8.86□□□□□ -0.99
VCX3A-202ENST00000398729 C9orf62Q8N4C0 152 aa8.86□□□□□ -0.99
VCX3A-202ENST00000398729 DNAJC30Q96LL9 226 aa8.86□□□□□ -0.99
VCX3A-202ENST00000398729 CHCHD5Q9BSY4 110 aa8.86□□□□□ -0.99
VCX3A-202ENST00000398729 hCG_2014768A0A024R1R8 64 aa8.85□□□□□ -0.99
VCX3A-202ENST00000398729 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.85□□□□□ -0.99
VCX3A-202ENST00000398729 M0QY20 66 aa8.84□□□□□ -0.99
VCX3A-202ENST00000398729 CRPP02741 224 aa8.84□□□□□ -0.99
VCX3A-202ENST00000398729 ANGP03950 147 aaKnown RBP8.84□□□□□ -0.99
VCX3A-202ENST00000398729 TRGC1P0CF51 173 aa8.84□□□□□ -0.99
VCX3A-202ENST00000398729 MPV17L2Q567V2 206 aa8.84□□□□□ -0.99
VCX3A-202ENST00000398729 ATRAIDQ6UW56 229 aa8.84□□□□□ -0.99
VCX3A-202ENST00000398729 LYZL1Q6UWQ5 148 aa8.84□□□□□ -0.99
VCX3A-202ENST00000398729 C15orf54Q8N8G6 183 aa8.84□□□□□ -0.99
VCX3A-202ENST00000398729 Q8N976 141 aa8.84□□□□□ -0.99
VCX3A-202ENST00000398729 C1orf43Q9BWL3 253 aa8.84□□□□□ -0.99
VCX3A-202ENST00000398729 TRBV25-1A0A075B6N4 114 aa8.83□□□□□ -1
VCX3A-202ENST00000398729 BLOC1S1P78537 153 aa8.83□□□□□ -1
VCX3A-202ENST00000398729 HAMPP81172 84 aa8.83□□□□□ -1
VCX3A-202ENST00000398729 SUMO4Q6EEV6 95 aa8.83□□□□□ -1
VCX3A-202ENST00000398729 ALKAL2Q6UX46 152 aa8.83□□□□□ -1
VCX3A-202ENST00000398729 NTM-AS1Q6ZSK4 140 aa8.83□□□□□ -1
VCX3A-202ENST00000398729 NUDT10Q8NFP7 164 aa8.83□□□□□ -1
VCX3A-202ENST00000398729 NUDT11Q96G61 164 aa8.83□□□□□ -1
VCX3A-202ENST00000398729 LRP1Q07954 4544 aaKnown RBP8.82□□□□□ -1
VCX3A-202ENST00000398729 FAM229AH3BQW9 127 aa8.82□□□□□ -1
VCX3A-202ENST00000398729 NTF3P20783 257 aa8.82□□□□□ -1
VCX3A-202ENST00000398729 CTRLP40313 264 aa8.82□□□□□ -1
VCX3A-202ENST00000398729 WDR73Q6P4I2 378 aa8.82□□□□□ -1
VCX3A-202ENST00000398729 ENHOQ6UWT2 76 aa8.82□□□□□ -1
VCX3A-202ENST00000398729 DPH3P1Q9H4G8 78 aa8.82□□□□□ -1
VCX3A-202ENST00000398729 RPP21Q9H633 154 aaKnown RBP8.82□□□□□ -1
VCX3A-202ENST00000398729 FAM30AQ9NZY2 134 aa8.82□□□□□ -1
VCX3A-202ENST00000398729 IGHV1-24A0A0C4DH33 117 aa8.81□□□□□ -1
VCX3A-202ENST00000398729 IQCJQ1A5X6 159 aa8.81□□□□□ -1
VCX3A-202ENST00000398729 RASL11AQ6T310 242 aa8.81□□□□□ -1
VCX3A-202ENST00000398729 OCC1Q8TAD7 63 aa8.81□□□□□ -1
VCX3A-202ENST00000398729 TMEM250H0YL14 139 aa8.8□□□□□ -1
VCX3A-202ENST00000398729 K7EN84 100 aa8.8□□□□□ -1
VCX3A-202ENST00000398729 NKX2-5P52952 324 aaPredicted RBP8.8□□□□□ -1
VCX3A-202ENST00000398729 RBX1P62877 108 aa8.8□□□□□ -1
VCX3A-202ENST00000398729 GAGE6Q13070 117 aa8.8□□□□□ -1
VCX3A-202ENST00000398729 TWIST1Q15672 202 aa8.8□□□□□ -1
VCX3A-202ENST00000398729 MIAQ16674 131 aa8.8□□□□□ -1
VCX3A-202ENST00000398729 C14orf177Q52M58 125 aa8.8□□□□□ -1
VCX3A-202ENST00000398729 CNFNQ9BYD5 112 aa8.8□□□□□ -1
VCX3A-202ENST00000398729 RNASE7Q9H1E1 156 aaKnown RBP8.8□□□□□ -1
VCX3A-202ENST00000398729 Q6ZSA8 131 aa8.79□□□□□ -1
VCX3A-202ENST00000398729 LYPD6BQ8NI32 183 aa8.79□□□□□ -1
VCX3A-202ENST00000398729 NIT2Q9NQR4 276 aa8.79□□□□□ -1
VCX3A-202ENST00000398729 HLA-DQA1P01909 254 aa8.78□□□□□ -1
VCX3A-202ENST00000398729 LINC00269Q8N2A0 174 aa8.78□□□□□ -1
VCX3A-202ENST00000398729 TMEM243Q9BU79 118 aa8.78□□□□□ -1
VCX3A-202ENST00000398729 PRR34Q9NV39 138 aa8.78□□□□□ -1
VCX3A-202ENST00000398729 CEBPGP53567 150 aa8.77□□□□□ -1.01
VCX3A-202ENST00000398729 LINC01620Q4KN68 170 aa8.77□□□□□ -1.01
VCX3A-202ENST00000398729 CLPSL2Q6UWE3 100 aa8.77□□□□□ -1.01
VCX3A-202ENST00000398729 SMIM15Q7Z3B0 74 aa8.77□□□□□ -1.01
VCX3A-202ENST00000398729 PGLYRP4Q96LB8 373 aa8.77□□□□□ -1.01
VCX3A-202ENST00000398729 A8MWL6 223 aa8.76□□□□□ -1.01
VCX3A-202ENST00000398729 J3QL48 77 aa8.76□□□□□ -1.01
VCX3A-202ENST00000398729 GATCO43716 136 aaKnown RBP8.76□□□□□ -1.01
VCX3A-202ENST00000398729 FAM231DQ6ZW35 169 aa8.76□□□□□ -1.01
VCX3A-202ENST00000398729 GTSF1Q8WW33 167 aa8.76□□□□□ -1.01
VCX3A-202ENST00000398729 EIF5A2Q9GZV4 153 aaKnown RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms