RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 KRTAP10-9P60411 292 aa10.87□□□□□ -0.67
PCDHA11-201ENST00000398640 C5orf47Q569G3 176 aa10.87□□□□□ -0.67
PCDHA11-201ENST00000398640 HIGD2BQ4VC39 106 aa10.87□□□□□ -0.67
PCDHA11-201ENST00000398640 WI2-2373I1.2A0A1W2PRP0 233 aa10.87□□□□□ -0.67
PCDHA11-201ENST00000398640 CCL25O15444 150 aa10.87□□□□□ -0.67
PCDHA11-201ENST00000398640 MAP6D1Q9H9H5 199 aa10.87□□□□□ -0.67
PCDHA11-201ENST00000398640 TRAV26-1A0A087WT03 109 aa10.87□□□□□ -0.67
PCDHA11-201ENST00000398640 GPHB5Q86YW7 130 aa10.87□□□□□ -0.67
PCDHA11-201ENST00000398640 ODF3BA8MYP8 253 aa10.86□□□□□ -0.67
PCDHA11-201ENST00000398640 MALRD1Q5VYJ5 2156 aa10.86□□□□□ -0.67
PCDHA11-201ENST00000398640 PRSS47A8MTI9 375 aa10.86□□□□□ -0.67
PCDHA11-201ENST00000398640 LINC00482Q8N8I6 264 aa10.86□□□□□ -0.67
PCDHA11-201ENST00000398640 CREBBPQ92793 2442 aa10.86□□□□□ -0.67
PCDHA11-201ENST00000398640 M0R2N4 97 aa10.86□□□□□ -0.67
PCDHA11-201ENST00000398640 MDFICQ9P1T7 246 aa10.86□□□□□ -0.67
PCDHA11-201ENST00000398640 LRP4O75096 1905 aa10.85□□□□□ -0.67
PCDHA11-201ENST00000398640 RBM3P98179 157 aaKnown RBP10.85□□□□□ -0.67
PCDHA11-201ENST00000398640 SPAG11BQ08648 103 aa10.85□□□□□ -0.67
PCDHA11-201ENST00000398640 NUPR1O60356 82 aa10.85□□□□□ -0.67
PCDHA11-201ENST00000398640 NDUFB1O75438 58 aa10.85□□□□□ -0.67
PCDHA11-201ENST00000398640 OPRPNQ99935 248 aaPredicted RBP10.85□□□□□ -0.67
PCDHA11-201ENST00000398640 SMR3AQ99954 134 aa10.85□□□□□ -0.67
PCDHA11-201ENST00000398640 SPANXDQ9BXN6 97 aa10.84□□□□□ -0.67
PCDHA11-201ENST00000398640 DEFB131BA0A096LNP1 70 aa10.84□□□□□ -0.67
PCDHA11-201ENST00000398640 GAGE12HA6NDE8 117 aa10.84□□□□□ -0.67
PCDHA11-201ENST00000398640 K7EMT4 169 aa10.84□□□□□ -0.67
PCDHA11-201ENST00000398640 Q6ZSV7 163 aa10.84□□□□□ -0.67
PCDHA11-201ENST00000398640 IGLV2-18A0A075B6J9 118 aa10.84□□□□□ -0.67
PCDHA11-201ENST00000398640 SPATA25Q9BR10 227 aa10.83□□□□□ -0.67
PCDHA11-201ENST00000398640 PLA2G2EQ9NZK7 142 aa10.83□□□□□ -0.68
PCDHA11-201ENST00000398640 A4D1N5 150 aa10.83□□□□□ -0.68
PCDHA11-201ENST00000398640 ODF3L1Q8IXM7 274 aa10.83□□□□□ -0.68
PCDHA11-201ENST00000398640 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.83□□□□□ -0.68
PCDHA11-201ENST00000398640 IGKV3D-7A0A0C4DH55 119 aa10.83□□□□□ -0.68
PCDHA11-201ENST00000398640 TMEM263Q8WUH6 116 aaKnown RBP10.83□□□□□ -0.68
PCDHA11-201ENST00000398640 LINC01548A6NM66 108 aa10.83□□□□□ -0.68
PCDHA11-201ENST00000398640 LY6G6CO95867 125 aa10.82□□□□□ -0.68
PCDHA11-201ENST00000398640 IGLV2-14P01704 120 aa10.82□□□□□ -0.68
PCDHA11-201ENST00000398640 BAALCQ8WXS3 180 aa10.82□□□□□ -0.68
PCDHA11-201ENST00000398640 NACAE9PAV3 2078 aa10.82□□□□□ -0.68
PCDHA11-201ENST00000398640 CRYGDP07320 174 aa10.82□□□□□ -0.68
PCDHA11-201ENST00000398640 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.81□□□□□ -0.68
PCDHA11-201ENST00000398640 PRO0255Q9UI72 69 aa10.81□□□□□ -0.68
PCDHA11-201ENST00000398640 NREPQ16612 68 aa10.81□□□□□ -0.68
PCDHA11-201ENST00000398640 CEMP1Q6PRD7 247 aaPredicted RBP10.81□□□□□ -0.68
PCDHA11-201ENST00000398640 FAM222AQ5U5X8 452 aa10.81□□□□□ -0.68
PCDHA11-201ENST00000398640 WFDC9Q8NEX5 89 aa10.81□□□□□ -0.68
PCDHA11-201ENST00000398640 C14orf132Q9NPU4 83 aa10.81□□□□□ -0.68
PCDHA11-201ENST00000398640 P0DMU3 169 aa10.8□□□□□ -0.68
PCDHA11-201ENST00000398640 FAM231AP0DMU4 169 aa10.8□□□□□ -0.68
PCDHA11-201ENST00000398640 FAM231CP0DMU5 169 aa10.8□□□□□ -0.68
PCDHA11-201ENST00000398640 B9D2Q9BPU9 175 aa10.8□□□□□ -0.68
PCDHA11-201ENST00000398640 TTTY13Q9BZ97 58 aa10.8□□□□□ -0.68
PCDHA11-201ENST00000398640 FAM167A-AS1Q96KT0 104 aa10.8□□□□□ -0.68
PCDHA11-201ENST00000398640 TP53TG3Q9ULZ0 132 aa10.8□□□□□ -0.68
PCDHA11-201ENST00000398640 CHD3Q12873 2000 aaKnown RBP10.8□□□□□ -0.68
PCDHA11-201ENST00000398640 PLCE1Q9P212 2302 aa10.8□□□□□ -0.68
PCDHA11-201ENST00000398640 ANKRD39Q53RE8 183 aa10.8□□□□□ -0.68
PCDHA11-201ENST00000398640 LYPD6Q86Y78 171 aa10.8□□□□□ -0.68
PCDHA11-201ENST00000398640 PIEZO1Q92508 2521 aa10.8□□□□□ -0.68
PCDHA11-201ENST00000398640 TDRG1Q3Y452 100 aa10.79□□□□□ -0.68
PCDHA11-201ENST00000398640 HIVEP2P31629 2446 aa10.79□□□□□ -0.68
PCDHA11-201ENST00000398640 H0Y9J4 135 aa10.78□□□□□ -0.68
PCDHA11-201ENST00000398640 C14orf177Q52M58 125 aa10.78□□□□□ -0.68
PCDHA11-201ENST00000398640 TOMM6Q96B49 74 aa10.78□□□□□ -0.68
PCDHA11-201ENST00000398640 H0YGX0 51 aa10.78□□□□□ -0.68
PCDHA11-201ENST00000398640 MIR7-3HGQ8N6C7 128 aa10.78□□□□□ -0.68
PCDHA11-201ENST00000398640 LECT2O14960 151 aa10.78□□□□□ -0.68
PCDHA11-201ENST00000398640 FRMD6-AS1P0C7T7 363 aa10.78□□□□□ -0.68
PCDHA11-201ENST00000398640 DIRC1Q969H9 104 aa10.78□□□□□ -0.68
PCDHA11-201ENST00000398640 MED13LQ71F56 2210 aa10.78□□□□□ -0.68
PCDHA11-201ENST00000398640 TNRC6BQ9UPQ9 1833 aaKnown RBP10.77□□□□□ -0.68
PCDHA11-201ENST00000398640 A0A096LNI7 61 aa10.77□□□□□ -0.68
PCDHA11-201ENST00000398640 A0A0J9YX75 114 aa10.77□□□□□ -0.68
PCDHA11-201ENST00000398640 CLEC2BQ92478 149 aa10.77□□□□□ -0.68
PCDHA11-201ENST00000398640 LINC01545Q5VT33 79 aa10.77□□□□□ -0.69
PCDHA11-201ENST00000398640 A0A1B0GX51 115 aa10.77□□□□□ -0.69
PCDHA11-201ENST00000398640 Q6ZTI0 123 aa10.77□□□□□ -0.69
PCDHA11-201ENST00000398640 A0A087WZ39 114 aa10.76□□□□□ -0.69
PCDHA11-201ENST00000398640 LINC00269Q8N2A0 174 aa10.76□□□□□ -0.69
PCDHA11-201ENST00000398640 DSCAMO60469 2012 aa10.76□□□□□ -0.69
PCDHA11-201ENST00000398640 COA6Q5JTJ3 125 aaKnown RBP10.76□□□□□ -0.69
PCDHA11-201ENST00000398640 CCDC140Q96MF4 163 aa10.75□□□□□ -0.69
PCDHA11-201ENST00000398640 HIGD2AQ9BW72 106 aa10.75□□□□□ -0.69
PCDHA11-201ENST00000398640 C10orf99Q6UWK7 81 aa10.75□□□□□ -0.69
PCDHA11-201ENST00000398640 ZNF295-AS1Q8N0V1 137 aa10.75□□□□□ -0.69
PCDHA11-201ENST00000398640 MP68P56378 58 aa10.75□□□□□ -0.69
PCDHA11-201ENST00000398640 Q6ZUT4 128 aa10.75□□□□□ -0.69
PCDHA11-201ENST00000398640 LINC01006Q8NI28 216 aa10.75□□□□□ -0.69
PCDHA11-201ENST00000398640 SHANK1Q9Y566 2161 aa10.74□□□□□ -0.69
PCDHA11-201ENST00000398640 C11orf86A6NJI1 115 aa10.74□□□□□ -0.69
PCDHA11-201ENST00000398640 TMEM258P61165 79 aa10.74□□□□□ -0.69
PCDHA11-201ENST00000398640 TRBV6-1A0A0K0K1D8 114 aa10.74□□□□□ -0.69
PCDHA11-201ENST00000398640 IGF1P05019 195 aa10.74□□□□□ -0.69
PCDHA11-201ENST00000398640 CXCL5P42830 114 aa10.74□□□□□ -0.69
PCDHA11-201ENST00000398640 LGALS9O00182 355 aa10.73□□□□□ -0.69
PCDHA11-201ENST00000398640 NCOR2Q9Y618 2525 aa10.73□□□□□ -0.69
PCDHA11-201ENST00000398640 ZNF702PQ9H963 129 aa10.73□□□□□ -0.69
PCDHA11-201ENST00000398640 PSMB8P28062 276 aa10.72□□□□□ -0.69
PCDHA11-201ENST00000398640 FXYD2P54710 66 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms