RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 F5H768 121 aa7.19□□□□□ -1.26
NEDD8-202ENST00000396828 NUDT3O95989 172 aa7.19□□□□□ -1.26
NEDD8-202ENST00000396828 EVI2AP22794 236 aa7.19□□□□□ -1.26
NEDD8-202ENST00000396828 FABP9Q0Z7S8 132 aa7.19□□□□□ -1.26
NEDD8-202ENST00000396828 C14orf178Q8N769 122 aaPredicted RBP7.19□□□□□ -1.26
NEDD8-202ENST00000396828 LINC00588Q9Y4M8 146 aa7.19□□□□□ -1.26
NEDD8-202ENST00000396828 TRGV2A0A075B6R0 118 aa7.18□□□□□ -1.26
NEDD8-202ENST00000396828 NBDYA0A0U1RRE5 68 aa7.18□□□□□ -1.26
NEDD8-202ENST00000396828 C1orf196B1AJZ1 125 aa7.18□□□□□ -1.26
NEDD8-202ENST00000396828 RHODO00212 210 aa7.18□□□□□ -1.26
NEDD8-202ENST00000396828 TRGC2P03986 189 aa7.18□□□□□ -1.26
NEDD8-202ENST00000396828 MGPP08493 103 aa7.18□□□□□ -1.26
NEDD8-202ENST00000396828 FAM74A4Q5TZK3 123 aa7.18□□□□□ -1.26
NEDD8-202ENST00000396828 FAM104BQ5XKR9 115 aa7.18□□□□□ -1.26
NEDD8-202ENST00000396828 Q6ZTI0 123 aa7.18□□□□□ -1.26
NEDD8-202ENST00000396828 AMN1Q8IY45 258 aa7.18□□□□□ -1.26
NEDD8-202ENST00000396828 C15orf53Q8NAA6 179 aa7.18□□□□□ -1.26
NEDD8-202ENST00000396828 OR4C5Q8NGB2 326 aa7.18□□□□□ -1.26
NEDD8-202ENST00000396828 A0A087WWL8 130 aa7.17□□□□□ -1.26
NEDD8-202ENST00000396828 GAGE12BA1L429 117 aa7.17□□□□□ -1.26
NEDD8-202ENST00000396828 F5H697 171 aa7.17□□□□□ -1.26
NEDD8-202ENST00000396828 CIDEAO60543 219 aa7.17□□□□□ -1.26
NEDD8-202ENST00000396828 GAGE7O76087 117 aa7.17□□□□□ -1.26
NEDD8-202ENST00000396828 GAGE12FP0CL80 117 aa7.17□□□□□ -1.26
NEDD8-202ENST00000396828 GAGE12GP0CL81 117 aa7.17□□□□□ -1.26
NEDD8-202ENST00000396828 GAGE12IP0CL82 117 aa7.17□□□□□ -1.26
NEDD8-202ENST00000396828 RAB4AP20338 218 aa7.17□□□□□ -1.26
NEDD8-202ENST00000396828 SLAQ13239 276 aa7.17□□□□□ -1.26
NEDD8-202ENST00000396828 ZNF56Q15929 161 aa7.17□□□□□ -1.26
NEDD8-202ENST00000396828 KRTAP1-5Q9BYS1 174 aa7.17□□□□□ -1.26
NEDD8-202ENST00000396828 JPT2Q9H910 190 aa7.17□□□□□ -1.26
NEDD8-202ENST00000396828 FAT1Q14517 4588 aa7.17□□□□□ -1.26
NEDD8-202ENST00000396828 TRAV4A0A0B4J268 109 aa7.16□□□□□ -1.26
NEDD8-202ENST00000396828 C16orf90A8MZG2 172 aa7.16□□□□□ -1.26
NEDD8-202ENST00000396828 RS1O15537 224 aa7.16□□□□□ -1.26
NEDD8-202ENST00000396828 PPBPP02775 128 aa7.16□□□□□ -1.26
NEDD8-202ENST00000396828 CRYGDP07320 174 aa7.16□□□□□ -1.26
NEDD8-202ENST00000396828 CKS2P33552 79 aa7.16□□□□□ -1.26
NEDD8-202ENST00000396828 MRPL51Q4U2R6 128 aaKnown RBP7.16□□□□□ -1.26
NEDD8-202ENST00000396828 CFAP126Q5VTH2 177 aa7.16□□□□□ -1.26
NEDD8-202ENST00000396828 ZFP2Q6ZN57 461 aa7.16□□□□□ -1.26
NEDD8-202ENST00000396828 C6orf223Q8N319 242 aa7.16□□□□□ -1.26
NEDD8-202ENST00000396828 MRAP2Q96G30 205 aa7.16□□□□□ -1.26
NEDD8-202ENST00000396828 KIF25-AS1Q9Y6Z4 181 aa7.16□□□□□ -1.26
NEDD8-202ENST00000396828 H7C1H1 209 aa7.15□□□□□ -1.26
NEDD8-202ENST00000396828 PPP1R17O96001 155 aa7.15□□□□□ -1.26
NEDD8-202ENST00000396828 ATP5G1P05496 136 aa7.15□□□□□ -1.26
NEDD8-202ENST00000396828 HOXA5P20719 270 aa7.15□□□□□ -1.26
NEDD8-202ENST00000396828 RAB5BP61020 215 aa7.15□□□□□ -1.26
NEDD8-202ENST00000396828 KIAA1644Q3SXP7 199 aa7.15□□□□□ -1.26
NEDD8-202ENST00000396828 ORMDL3Q8N138 153 aa7.15□□□□□ -1.26
NEDD8-202ENST00000396828 LINC00612Q8N6U2 182 aa7.15□□□□□ -1.26
NEDD8-202ENST00000396828 RNF185Q96GF1 192 aa7.15□□□□□ -1.26
NEDD8-202ENST00000396828 C18orf15Q96N68 181 aa7.15□□□□□ -1.26
NEDD8-202ENST00000396828 SAMD10Q9BYL1 202 aa7.15□□□□□ -1.26
NEDD8-202ENST00000396828 HERC1Q15751 4861 aa7.14□□□□□ -1.27
NEDD8-202ENST00000396828 D6R8Y8 96 aa7.14□□□□□ -1.27
NEDD8-202ENST00000396828 SRIP30626 198 aa7.14□□□□□ -1.27
NEDD8-202ENST00000396828 MAPKAPK5-AS1Q8N8E1 139 aa7.14□□□□□ -1.27
NEDD8-202ENST00000396828 TRAV26-1A0A087WT03 109 aa7.13□□□□□ -1.27
NEDD8-202ENST00000396828 IGHV3-73A0A0B4J1V6 119 aa7.13□□□□□ -1.27
NEDD8-202ENST00000396828 TRGV4A0A0C4DH28 118 aa7.13□□□□□ -1.27
NEDD8-202ENST00000396828 A0A0J9YY99 117 aa7.13□□□□□ -1.27
NEDD8-202ENST00000396828 IGHV3-53P01767 116 aa7.13□□□□□ -1.27
NEDD8-202ENST00000396828 CCL18P55774 89 aa7.13□□□□□ -1.27
NEDD8-202ENST00000396828 LINC00315P59091 139 aa7.13□□□□□ -1.27
NEDD8-202ENST00000396828 KRTAP10-2P60368 255 aa7.13□□□□□ -1.27
NEDD8-202ENST00000396828 UFSP1Q6NVU6 142 aa7.13□□□□□ -1.27
NEDD8-202ENST00000396828 PRELID3AQ96N28 172 aa7.13□□□□□ -1.27
NEDD8-202ENST00000396828 ALKBH7Q9BT30 221 aaPredicted RBP7.13□□□□□ -1.27
NEDD8-202ENST00000396828 Q9H8V8 135 aa7.13□□□□□ -1.27
NEDD8-202ENST00000396828 LAMTOR2Q9Y2Q5 125 aa7.13□□□□□ -1.27
NEDD8-202ENST00000396828 TRAV26-2A0A0B4J265 109 aa7.12□□□□□ -1.27
NEDD8-202ENST00000396828 SMKR1H3BMG3 65 aa7.12□□□□□ -1.27
NEDD8-202ENST00000396828 LCE2BO14633 110 aa7.12□□□□□ -1.27
NEDD8-202ENST00000396828 PHOX2AO14813 284 aa7.12□□□□□ -1.27
NEDD8-202ENST00000396828 CDK2AP2O75956 126 aa7.12□□□□□ -1.27
NEDD8-202ENST00000396828 NCR2O95944 276 aa7.12□□□□□ -1.27
NEDD8-202ENST00000396828 ESRGQ1W209 222 aa7.12□□□□□ -1.27
NEDD8-202ENST00000396828 SUMO4Q6EEV6 95 aa7.12□□□□□ -1.27
NEDD8-202ENST00000396828 ZNF479Q96JC4 524 aa7.12□□□□□ -1.27
NEDD8-202ENST00000396828 HIST1H2BKO60814 126 aa7.11□□□□□ -1.27
NEDD8-202ENST00000396828 TNFRSF6BO95407 300 aa7.11□□□□□ -1.27
NEDD8-202ENST00000396828 HIST1H2BJP06899 126 aa7.11□□□□□ -1.27
NEDD8-202ENST00000396828 HIST1H2BOP23527 126 aa7.11□□□□□ -1.27
NEDD8-202ENST00000396828 HIST1H2BBP33778 126 aa7.11□□□□□ -1.27
NEDD8-202ENST00000396828 HIST1H2BDP58876 126 aa7.11□□□□□ -1.27
NEDD8-202ENST00000396828 HIST1H2BCP62807 126 aa7.11□□□□□ -1.27
NEDD8-202ENST00000396828 HIST2H2BEQ16778 126 aa7.11□□□□□ -1.27
NEDD8-202ENST00000396828 OR10J3Q5JRS4 329 aa7.11□□□□□ -1.27
NEDD8-202ENST00000396828 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.11□□□□□ -1.27
NEDD8-202ENST00000396828 SPATA12Q7Z6I5 190 aa7.11□□□□□ -1.27
NEDD8-202ENST00000396828 HIST1H2BHQ93079 126 aa7.11□□□□□ -1.27
NEDD8-202ENST00000396828 HIST1H2BNQ99877 126 aa7.11□□□□□ -1.27
NEDD8-202ENST00000396828 HIST1H2BMQ99879 126 aa7.11□□□□□ -1.27
NEDD8-202ENST00000396828 TRBV6-4A0A1B0GX49 114 aa7.1□□□□□ -1.27
NEDD8-202ENST00000396828 M0QY20 66 aa7.1□□□□□ -1.27
NEDD8-202ENST00000396828 FUSP35637 526 aaKnown RBP eCLIP7.1□□□□□ -1.27
NEDD8-202ENST00000396828 C20orf78Q9BR46 151 aa7.1□□□□□ -1.27
NEDD8-202ENST00000396828 PRADC1Q9BSG0 188 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 262.1 ms