RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 C17orf58Q2M2W7 97 aa8.08□□□□□ -1.12
COL4A4-201ENST00000396625 HIST2H2BDQ6DRA6 164 aa8.08□□□□□ -1.12
COL4A4-201ENST00000396625 IGLV3-9A0A075B6K5 115 aa8.07□□□□□ -1.12
COL4A4-201ENST00000396625 F8W735 103 aaPredicted RBP8.07□□□□□ -1.12
COL4A4-201ENST00000396625 LTBP1Q14766 1721 aa8.07□□□□□ -1.12
COL4A4-201ENST00000396625 NPBQ8NG41 125 aa8.07□□□□□ -1.12
COL4A4-201ENST00000396625 C17orf77Q96MU5 243 aa8.07□□□□□ -1.12
COL4A4-201ENST00000396625 Q0VFX4 171 aa8.07□□□□□ -1.12
COL4A4-201ENST00000396625 DEFB136Q30KP8 78 aa8.07□□□□□ -1.12
COL4A4-201ENST00000396625 PTH2Q96A98 100 aa8.07□□□□□ -1.12
COL4A4-201ENST00000396625 LENEPQ9Y5L5 61 aa8.07□□□□□ -1.12
COL4A4-201ENST00000396625 TCL1BO95988 128 aa8.07□□□□□ -1.12
COL4A4-201ENST00000396625 HOXB4P17483 251 aaPredicted RBP8.07□□□□□ -1.12
COL4A4-201ENST00000396625 J3QLI3 93 aa8.06□□□□□ -1.12
COL4A4-201ENST00000396625 CCL24O00175 119 aa8.06□□□□□ -1.12
COL4A4-201ENST00000396625 MT-ATP8P03928 68 aa8.06□□□□□ -1.12
COL4A4-201ENST00000396625 UNQ6494/PRO21346Q6UXR6 183 aa8.06□□□□□ -1.12
COL4A4-201ENST00000396625 C10orf105Q8TEF2 133 aa8.06□□□□□ -1.12
COL4A4-201ENST00000396625 LINC00173Q6ZV60 143 aa8.06□□□□□ -1.12
COL4A4-201ENST00000396625 PRR20EP86478 221 aa8.06□□□□□ -1.12
COL4A4-201ENST00000396625 PRR20CP86479 221 aa8.06□□□□□ -1.12
COL4A4-201ENST00000396625 PRR20DP86480 221 aa8.06□□□□□ -1.12
COL4A4-201ENST00000396625 PRR20BP86481 221 aa8.06□□□□□ -1.12
COL4A4-201ENST00000396625 PRR20AP86496 221 aa8.06□□□□□ -1.12
COL4A4-201ENST00000396625 C16orf54Q6UWD8 224 aa8.06□□□□□ -1.12
COL4A4-201ENST00000396625 ZNF491Q8N8L2 437 aa8.06□□□□□ -1.12
COL4A4-201ENST00000396625 ENHOQ6UWT2 76 aa8.06□□□□□ -1.12
COL4A4-201ENST00000396625 PIK3CD-AS1Q5SR53 167 aa8.06□□□□□ -1.12
COL4A4-201ENST00000396625 NDUFA11Q86Y39 141 aa8.06□□□□□ -1.12
COL4A4-201ENST00000396625 Q8N1Y9 231 aa8.06□□□□□ -1.12
COL4A4-201ENST00000396625 C1orf195Q5TG92 126 aa8.05□□□□□ -1.12
COL4A4-201ENST00000396625 LYPD6BQ8NI32 183 aa8.05□□□□□ -1.12
COL4A4-201ENST00000396625 A0A0J9YXV3 536 aa8.05□□□□□ -1.12
COL4A4-201ENST00000396625 C11orf86A6NJI1 115 aa8.05□□□□□ -1.12
COL4A4-201ENST00000396625 H3BUA1 57 aa8.05□□□□□ -1.12
COL4A4-201ENST00000396625 APRG1Q8IVJ8 170 aa8.05□□□□□ -1.12
COL4A4-201ENST00000396625 NDUFA7O95182 113 aa8.05□□□□□ -1.12
COL4A4-201ENST00000396625 IGLC6P0CF74 106 aa8.05□□□□□ -1.12
COL4A4-201ENST00000396625 SPRY2O43597 315 aa8.04□□□□□ -1.12
COL4A4-201ENST00000396625 HHLA3Q9XRX5 114 aa8.04□□□□□ -1.12
COL4A4-201ENST00000396625 SPART-AS1P0CW21 52 aa8.04□□□□□ -1.12
COL4A4-201ENST00000396625 TMEM105Q8N8V8 129 aa8.04□□□□□ -1.12
COL4A4-201ENST00000396625 VPREB3Q9UKI3 123 aa8.04□□□□□ -1.12
COL4A4-201ENST00000396625 IGHV1-58A0A0C4DH39 117 aa8.04□□□□□ -1.12
COL4A4-201ENST00000396625 LMO1P25800 156 aa8.04□□□□□ -1.12
COL4A4-201ENST00000396625 A0A0J9YWU9 116 aa8.04□□□□□ -1.12
COL4A4-201ENST00000396625 SPAG11BQ08648 103 aa8.04□□□□□ -1.12
COL4A4-201ENST00000396625 MIR7-3HGQ8N6C7 128 aa8.04□□□□□ -1.12
COL4A4-201ENST00000396625 CSRP1P21291 193 aaKnown RBP8.04□□□□□ -1.12
COL4A4-201ENST00000396625 E9PLD3 99 aa8.03□□□□□ -1.12
COL4A4-201ENST00000396625 MIAQ16674 131 aa8.03□□□□□ -1.12
COL4A4-201ENST00000396625 KIR2DL5BQ8NHK3 375 aa8.03□□□□□ -1.12
COL4A4-201ENST00000396625 AGPAT4-IT1Q9H0P7 198 aa8.03□□□□□ -1.12
COL4A4-201ENST00000396625 ZFHX2Q9C0A1 2572 aaPredicted RBP8.03□□□□□ -1.12
COL4A4-201ENST00000396625 TIMM17BO60830 172 aa8.03□□□□□ -1.12
COL4A4-201ENST00000396625 B3GALT5-AS1P59052 145 aa8.03□□□□□ -1.12
COL4A4-201ENST00000396625 ELANEP08246 267 aa8.03□□□□□ -1.12
COL4A4-201ENST00000396625 LINC00311Q8N616 119 aa8.03□□□□□ -1.12
COL4A4-201ENST00000396625 CD59P13987 128 aa8.03□□□□□ -1.12
COL4A4-201ENST00000396625 IMUPQ9GZP8 106 aa8.03□□□□□ -1.12
COL4A4-201ENST00000396625 C15orf65H3BRN8 121 aa8.02□□□□□ -1.13
COL4A4-201ENST00000396625 FLG2Q5D862 2391 aaPredicted RBP8.02□□□□□ -1.13
COL4A4-201ENST00000396625 SLURP1P55000 103 aa8.02□□□□□ -1.13
COL4A4-201ENST00000396625 LOXL1Q08397 574 aaPredicted RBP8.02□□□□□ -1.13
COL4A4-201ENST00000396625 SNURFQ9Y675 71 aa8.02□□□□□ -1.13
COL4A4-201ENST00000396625 ODF1Q14990 250 aa8.02□□□□□ -1.13
COL4A4-201ENST00000396625 PIFOQ8TCI5 191 aa8.02□□□□□ -1.13
COL4A4-201ENST00000396625 NFE4Q86UQ8 179 aa8.01□□□□□ -1.13
COL4A4-201ENST00000396625 FN1P02751 2386 aaKnown RBP8.01□□□□□ -1.13
COL4A4-201ENST00000396625 MRPS36P82909 103 aaKnown RBP8.01□□□□□ -1.13
COL4A4-201ENST00000396625 SCXQ7RTU7 201 aa8.01□□□□□ -1.13
COL4A4-201ENST00000396625 CTSGP08311 255 aa8.01□□□□□ -1.13
COL4A4-201ENST00000396625 Q8NFD4 153 aa8.01□□□□□ -1.13
COL4A4-201ENST00000396625 C9orf66Q5T8R8 295 aa8.01□□□□□ -1.13
COL4A4-201ENST00000396625 SERP1Q9Y6X1 66 aa8.01□□□□□ -1.13
COL4A4-201ENST00000396625 LOXP28300 417 aaPredicted RBP8.01□□□□□ -1.13
COL4A4-201ENST00000396625 BLCAPP62952 87 aa8.01□□□□□ -1.13
COL4A4-201ENST00000396625 PIEZO2Q9H5I5 2752 aa8□□□□□ -1.13
COL4A4-201ENST00000396625 GP9P14770 177 aa8□□□□□ -1.13
COL4A4-201ENST00000396625 RNF138Q8WVD3 245 aa8□□□□□ -1.13
COL4A4-201ENST00000396625 POLQO75417 2590 aa7.99□□□□□ -1.13
COL4A4-201ENST00000396625 RETNQ9HD89 108 aa7.99□□□□□ -1.13
COL4A4-201ENST00000396625 C14orf177Q52M58 125 aa7.99□□□□□ -1.13
COL4A4-201ENST00000396625 IGHV4-30-2A0A087WSY4 118 aa7.99□□□□□ -1.13
COL4A4-201ENST00000396625 CTRLP40313 264 aa7.99□□□□□ -1.13
COL4A4-201ENST00000396625 FAM19A3Q7Z5A8 133 aa7.99□□□□□ -1.13
COL4A4-201ENST00000396625 DIAPH2-AS1Q14236 149 aa7.99□□□□□ -1.13
COL4A4-201ENST00000396625 LRCOL1A6NCL2 159 aa7.99□□□□□ -1.13
COL4A4-201ENST00000396625 ESM1Q9NQ30 184 aa7.99□□□□□ -1.13
COL4A4-201ENST00000396625 FOXL2NBQ6ZUU3 175 aa7.98□□□□□ -1.13
COL4A4-201ENST00000396625 KLK12Q9UKR0 248 aa7.98□□□□□ -1.13
COL4A4-201ENST00000396625 TMEM263Q8WUH6 116 aaKnown RBP7.98□□□□□ -1.13
COL4A4-201ENST00000396625 NUPR1O60356 82 aa7.98□□□□□ -1.13
COL4A4-201ENST00000396625 PMAIP1Q13794 54 aa7.98□□□□□ -1.13
COL4A4-201ENST00000396625 GTSF1Q8WW33 167 aa7.98□□□□□ -1.13
COL4A4-201ENST00000396625 TTTY13Q9BZ97 58 aa7.98□□□□□ -1.13
COL4A4-201ENST00000396625 VPREB1P12018 145 aa7.97□□□□□ -1.13
COL4A4-201ENST00000396625 PRR4Q16378 134 aa7.97□□□□□ -1.13
COL4A4-201ENST00000396625 C9orf85Q96MD7 179 aa7.97□□□□□ -1.13
COL4A4-201ENST00000396625 MSRB1Q9NZV6 116 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms