RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 NDUFA11Q86Y39 141 aa10.81□□□□□ -0.68
COL4A3-202ENST00000396578 MUC4Q99102 2169 aa10.81□□□□□ -0.68
COL4A3-202ENST00000396578 SPAG11BQ08648 103 aa10.8□□□□□ -0.68
COL4A3-202ENST00000396578 IGHV7-81A0A0B4J1V7 117 aa10.8□□□□□ -0.68
COL4A3-202ENST00000396578 PRRC2AP48634 2157 aaKnown RBP10.8□□□□□ -0.68
COL4A3-202ENST00000396578 UQCRQO14949 82 aa10.8□□□□□ -0.68
COL4A3-202ENST00000396578 PTPRQQ9UMZ3 2332 aa10.79□□□□□ -0.68
COL4A3-202ENST00000396578 MIAQ16674 131 aa10.79□□□□□ -0.68
COL4A3-202ENST00000396578 CASC2Q6XLA1 102 aa10.79□□□□□ -0.68
COL4A3-202ENST00000396578 AJUBAQ96IF1 538 aa10.79□□□□□ -0.68
COL4A3-202ENST00000396578 IGHV4OR15-8A0A075B7B6 117 aa10.79□□□□□ -0.68
COL4A3-202ENST00000396578 A0A087WW49 117 aa10.79□□□□□ -0.68
COL4A3-202ENST00000396578 BPY2O14599 106 aa10.79□□□□□ -0.68
COL4A3-202ENST00000396578 TCL1BO95988 128 aa10.79□□□□□ -0.68
COL4A3-202ENST00000396578 TET2Q6N021 2002 aaPredicted RBP10.79□□□□□ -0.68
COL4A3-202ENST00000396578 COX7BP24311 80 aa10.79□□□□□ -0.68
COL4A3-202ENST00000396578 F8W735 103 aaPredicted RBP10.79□□□□□ -0.68
COL4A3-202ENST00000396578 SPG11Q96JI7 2443 aa10.79□□□□□ -0.68
COL4A3-202ENST00000396578 K7ERS5 55 aa10.78□□□□□ -0.68
COL4A3-202ENST00000396578 RITA1Q96K30 269 aa10.78□□□□□ -0.68
COL4A3-202ENST00000396578 CTSZQ9UBR2 303 aa10.78□□□□□ -0.68
COL4A3-202ENST00000396578 FAM167A-AS1Q96KT0 104 aa10.78□□□□□ -0.68
COL4A3-202ENST00000396578 B9D2Q9BPU9 175 aa10.78□□□□□ -0.68
COL4A3-202ENST00000396578 CTSGP08311 255 aa10.78□□□□□ -0.68
COL4A3-202ENST00000396578 PRSS33Q8NF86 280 aa10.78□□□□□ -0.68
COL4A3-202ENST00000396578 IGKV1-17P01599 117 aa10.77□□□□□ -0.68
COL4A3-202ENST00000396578 C11orf53Q8IXP5 236 aa10.77□□□□□ -0.68
COL4A3-202ENST00000396578 NDUFC2-KCTD14E9PQ53 114 aa10.77□□□□□ -0.69
COL4A3-202ENST00000396578 ZNF524Q96C55 264 aa10.77□□□□□ -0.69
COL4A3-202ENST00000396578 FAM236DA0A1B0GTK5 79 aa10.77□□□□□ -0.69
COL4A3-202ENST00000396578 FAM236CP0DP71 79 aa10.77□□□□□ -0.69
COL4A3-202ENST00000396578 FAM240AA0A1B0GVK7 77 aa10.76□□□□□ -0.69
COL4A3-202ENST00000396578 CSPG4Q6UVK1 2322 aa10.76□□□□□ -0.69
COL4A3-202ENST00000396578 USP17L23D6RBM5 183 aa10.76□□□□□ -0.69
COL4A3-202ENST00000396578 C5orf56Q8N8D9 126 aa10.76□□□□□ -0.69
COL4A3-202ENST00000396578 FANCD2OSQ96PS1 177 aa10.76□□□□□ -0.69
COL4A3-202ENST00000396578 TTTY13Q9BZ97 58 aa10.76□□□□□ -0.69
COL4A3-202ENST00000396578 FAM215AQ9Y5M1 114 aa10.76□□□□□ -0.69
COL4A3-202ENST00000396578 C2orf70A6NJV1 201 aa10.75□□□□□ -0.69
COL4A3-202ENST00000396578 NFE4Q86UQ8 179 aa10.75□□□□□ -0.69
COL4A3-202ENST00000396578 PTH2Q96A98 100 aa10.75□□□□□ -0.69
COL4A3-202ENST00000396578 SDIM1Q6ZPB5 146 aa10.75□□□□□ -0.69
COL4A3-202ENST00000396578 PRR15LQ9BU68 103 aa10.75□□□□□ -0.69
COL4A3-202ENST00000396578 MDFICQ9P1T7 246 aa10.75□□□□□ -0.69
COL4A3-202ENST00000396578 OTOGLQ3ZCN5 2332 aa10.75□□□□□ -0.69
COL4A3-202ENST00000396578 ESM1Q9NQ30 184 aa10.75□□□□□ -0.69
COL4A3-202ENST00000396578 PATE2Q6UY27 113 aa10.74□□□□□ -0.69
COL4A3-202ENST00000396578 HIST2H2BDQ6DRA6 164 aa10.74□□□□□ -0.69
COL4A3-202ENST00000396578 KLK12Q9UKR0 248 aa10.74□□□□□ -0.69
COL4A3-202ENST00000396578 TEX49A0A1B0GTD5 131 aa10.74□□□□□ -0.69
COL4A3-202ENST00000396578 TMEM263Q8WUH6 116 aaKnown RBP10.74□□□□□ -0.69
COL4A3-202ENST00000396578 IGHV4-38-2P0DP08 117 aa10.73□□□□□ -0.69
COL4A3-202ENST00000396578 ATP5EP2Q5VTU8 51 aa10.73□□□□□ -0.69
COL4A3-202ENST00000396578 C3orf22Q8N5N4 141 aa10.73□□□□□ -0.69
COL4A3-202ENST00000396578 TRBV6-1A0A0K0K1D8 114 aa10.73□□□□□ -0.69
COL4A3-202ENST00000396578 SPATA12Q7Z6I5 190 aa10.73□□□□□ -0.69
COL4A3-202ENST00000396578 LY6G6EA0A0G2JKS1 128 aa10.73□□□□□ -0.69
COL4A3-202ENST00000396578 C20orf197Q8N268 126 aa10.73□□□□□ -0.69
COL4A3-202ENST00000396578 U3KQA8 63 aa10.73□□□□□ -0.69
COL4A3-202ENST00000396578 IGLC6P0CF74 106 aa10.72□□□□□ -0.69
COL4A3-202ENST00000396578 A0A0U1RQV1 116 aa10.72□□□□□ -0.69
COL4A3-202ENST00000396578 PRAC2D3DTV9 90 aa10.72□□□□□ -0.69
COL4A3-202ENST00000396578 K7EMT4 169 aa10.72□□□□□ -0.69
COL4A3-202ENST00000396578 ATP5EP56381 51 aaPredicted RBP10.72□□□□□ -0.69
COL4A3-202ENST00000396578 V9GYY9 64 aa10.72□□□□□ -0.69
COL4A3-202ENST00000396578 BLCAPP62952 87 aa10.72□□□□□ -0.69
COL4A3-202ENST00000396578 SPRNQ5BIV9 151 aa10.71□□□□□ -0.69
COL4A3-202ENST00000396578 Q8N9W7 124 aa10.71□□□□□ -0.69
COL4A3-202ENST00000396578 MT-ATP8P03928 68 aa10.71□□□□□ -0.7
COL4A3-202ENST00000396578 GPHB5Q86YW7 130 aa10.71□□□□□ -0.7
COL4A3-202ENST00000396578 C4orf3Q8WVX3 66 aa10.71□□□□□ -0.7
COL4A3-202ENST00000396578 FAM208BQ5VWN6 2430 aa10.7□□□□□ -0.7
COL4A3-202ENST00000396578 SLX1AQ9BQ83 275 aa10.7□□□□□ -0.7
COL4A3-202ENST00000396578 KRTAP27-1Q3LI81 207 aa10.7□□□□□ -0.7
COL4A3-202ENST00000396578 NDUFC1O43677 76 aa10.69□□□□□ -0.7
COL4A3-202ENST00000396578 PIK3CD-AS1Q5SR53 167 aa10.69□□□□□ -0.7
COL4A3-202ENST00000396578 PLA2G2EQ9NZK7 142 aa10.69□□□□□ -0.7
COL4A3-202ENST00000396578 TRBV10-1A0A0K0K1A3 114 aa10.69□□□□□ -0.7
COL4A3-202ENST00000396578 J3QKU1 62 aa10.69□□□□□ -0.7
COL4A3-202ENST00000396578 DEFB113Q30KQ7 82 aa10.69□□□□□ -0.7
COL4A3-202ENST00000396578 C20orf203Q8NBC4 194 aa10.69□□□□□ -0.7
COL4A3-202ENST00000396578 A0A0J9YXY3 114 aa10.69□□□□□ -0.7
COL4A3-202ENST00000396578 C14orf177Q52M58 125 aa10.68□□□□□ -0.7
COL4A3-202ENST00000396578 UFSP1Q6NVU6 142 aa10.68□□□□□ -0.7
COL4A3-202ENST00000396578 DEFB135Q30KP9 77 aa10.68□□□□□ -0.7
COL4A3-202ENST00000396578 ENHOQ6UWT2 76 aa10.68□□□□□ -0.7
COL4A3-202ENST00000396578 KLK5Q9Y337 293 aaPredicted RBP10.68□□□□□ -0.7
COL4A3-202ENST00000396578 C19orf71A6NCJ1 209 aa10.67□□□□□ -0.7
COL4A3-202ENST00000396578 PTPN13Q12923 2485 aa10.67□□□□□ -0.7
COL4A3-202ENST00000396578 LYPD6Q86Y78 171 aa10.67□□□□□ -0.7
COL4A3-202ENST00000396578 MLST8Q9BVC4 326 aa10.67□□□□□ -0.7
COL4A3-202ENST00000396578 IGHV4-61A0A0C4DH41 118 aa10.67□□□□□ -0.7
COL4A3-202ENST00000396578 KIR2DL5BQ8NHK3 375 aa10.67□□□□□ -0.7
COL4A3-202ENST00000396578 EXPH5Q8NEV8 1989 aa10.66□□□□□ -0.7
COL4A3-202ENST00000396578 PRO0255Q9UI72 69 aa10.66□□□□□ -0.7
COL4A3-202ENST00000396578 ZFAND2AQ8N6M9 145 aa10.66□□□□□ -0.7
COL4A3-202ENST00000396578 RNF138Q8WVD3 245 aa10.66□□□□□ -0.7
COL4A3-202ENST00000396578 IGHV4-30-2A0A087WSY4 118 aa10.66□□□□□ -0.7
COL4A3-202ENST00000396578 SPANXB1Q9NS25 103 aaPredicted RBP10.66□□□□□ -0.7
COL4A3-202ENST00000396578 WFDC10BQ8IUB3 73 aa10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 586.1 ms