RNA–Protein interactions for RNA: ENST00000396263.6

CCHCR1-202, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5 BASIC

Gene CCHCR1, Length 2,490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-202ENST00000396263 C10orf99Q6UWK7 81 aa11.88□□□□□ -0.51
CCHCR1-202ENST00000396263 ZFP2Q6ZN57 461 aa11.88□□□□□ -0.51
CCHCR1-202ENST00000396263 LINC01356Q8N9X3 169 aa11.88□□□□□ -0.51
CCHCR1-202ENST00000396263 ATP6V0E2Q8NHE4 81 aa11.88□□□□□ -0.51
CCHCR1-202ENST00000396263 PGPEP1Q9NXJ5 209 aa11.88□□□□□ -0.51
CCHCR1-202ENST00000396263 IGHV3-16A0A0C4DH30 117 aa11.88□□□□□ -0.51
CCHCR1-202ENST00000396263 TSHBP01222 138 aa11.88□□□□□ -0.51
CCHCR1-202ENST00000396263 SNRPD3P62318 126 aaKnown RBP11.88□□□□□ -0.51
CCHCR1-202ENST00000396263 PRADC1Q9BSG0 188 aa11.88□□□□□ -0.51
CCHCR1-202ENST00000396263 TP53TG1Q9Y2A0 90 aa11.88□□□□□ -0.51
CCHCR1-202ENST00000396263 ZNF469Q96JG9 3925 aaPredicted RBP11.88□□□□□ -0.51
CCHCR1-202ENST00000396263 A0A087WWL8 130 aa11.87□□□□□ -0.51
CCHCR1-202ENST00000396263 TRBV6-5A0A0K0K1A5 114 aa11.87□□□□□ -0.51
CCHCR1-202ENST00000396263 K7EQG2 157 aa11.87□□□□□ -0.51
CCHCR1-202ENST00000396263 LGALS1P09382 135 aaKnown RBP11.87□□□□□ -0.51
CCHCR1-202ENST00000396263 CARD19Q96LW7 228 aa11.87□□□□□ -0.51
CCHCR1-202ENST00000396263 KIR2DL4Q99706 377 aa11.87□□□□□ -0.51
CCHCR1-202ENST00000396263 LRRC75A-AS1Q8N1F1 130 aa11.87□□□□□ -0.51
CCHCR1-202ENST00000396263 PAPPA-AS1Q5QFB9 102 aa11.86□□□□□ -0.51
CCHCR1-202ENST00000396263 KRTAP1-3Q8IUG1 177 aa11.86□□□□□ -0.51
CCHCR1-202ENST00000396263 TMEM141Q96I45 108 aa11.86□□□□□ -0.51
CCHCR1-202ENST00000396263 IGLV4-69A0A075B6H9 119 aa11.86□□□□□ -0.51
CCHCR1-202ENST00000396263 TRBV27A0A0K0K1C4 114 aa11.86□□□□□ -0.51
CCHCR1-202ENST00000396263 SDHAF1A6NFY7 115 aa11.86□□□□□ -0.51
CCHCR1-202ENST00000396263 J3QLI3 93 aa11.86□□□□□ -0.51
CCHCR1-202ENST00000396263 TIMM17AQ99595 171 aa11.86□□□□□ -0.51
CCHCR1-202ENST00000396263 ANAPC13Q9BS18 74 aa11.86□□□□□ -0.51
CCHCR1-202ENST00000396263 F5H697 171 aa11.85□□□□□ -0.51
CCHCR1-202ENST00000396263 HOXA3O43365 443 aaPredicted RBP11.85□□□□□ -0.51
CCHCR1-202ENST00000396263 PMVKQ15126 192 aa11.85□□□□□ -0.51
CCHCR1-202ENST00000396263 DLX4Q92988 240 aaPredicted RBP11.85□□□□□ -0.51
CCHCR1-202ENST00000396263 MDFICQ9P1T7 246 aa11.85□□□□□ -0.51
CCHCR1-202ENST00000396263 PSMB2P49721 201 aa11.84□□□□□ -0.51
CCHCR1-202ENST00000396263 TRAV12-2A0A075B6T6 113 aa11.84□□□□□ -0.51
CCHCR1-202ENST00000396263 C11orf86A6NJI1 115 aa11.84□□□□□ -0.51
CCHCR1-202ENST00000396263 ZNF815PA8K554 130 aa11.84□□□□□ -0.51
CCHCR1-202ENST00000396263 Q8N1Y9 231 aa11.84□□□□□ -0.51
CCHCR1-202ENST00000396263 CREBBPQ92793 2442 aa11.84□□□□□ -0.51
CCHCR1-202ENST00000396263 IGHV1OR15-1A0A075B7D0 117 aa11.83□□□□□ -0.52
CCHCR1-202ENST00000396263 B5MCH6 92 aa11.83□□□□□ -0.52
CCHCR1-202ENST00000396263 RPL39P62891 51 aaKnown RBP11.83□□□□□ -0.52
CCHCR1-202ENST00000396263 RNF152Q8N8N0 203 aa11.83□□□□□ -0.52
CCHCR1-202ENST00000396263 Q96MF0 132 aa11.83□□□□□ -0.52
CCHCR1-202ENST00000396263 PDZD2O15018 2839 aa11.83□□□□□ -0.52
CCHCR1-202ENST00000396263 IGKV3-20P01619 116 aa11.83□□□□□ -0.52
CCHCR1-202ENST00000396263 ELANEP08246 267 aa11.83□□□□□ -0.52
CCHCR1-202ENST00000396263 SYNJ2BPP57105 145 aa11.83□□□□□ -0.52
CCHCR1-202ENST00000396263 PRRC2AP48634 2157 aaKnown RBP11.83□□□□□ -0.52
CCHCR1-202ENST00000396263 M0QY20 66 aa11.82□□□□□ -0.52
CCHCR1-202ENST00000396263 FAM74A4Q5TZK3 123 aa11.82□□□□□ -0.52
CCHCR1-202ENST00000396263 VPREB3Q9UKI3 123 aa11.82□□□□□ -0.52
CCHCR1-202ENST00000396263 ITPR2Q14571 2701 aa11.82□□□□□ -0.52
CCHCR1-202ENST00000396263 LOC107984156A0A0G2JMH3 177 aa11.82□□□□□ -0.52
CCHCR1-202ENST00000396263 TGFAP01135 160 aa11.82□□□□□ -0.52
CCHCR1-202ENST00000396263 HERVK_113P61574 105 aa11.82□□□□□ -0.52
CCHCR1-202ENST00000396263 GAGE5Q13069 117 aa11.82□□□□□ -0.52
CCHCR1-202ENST00000396263 GAGE6Q13070 117 aa11.82□□□□□ -0.52
CCHCR1-202ENST00000396263 SHISA2Q6UWI4 295 aa11.82□□□□□ -0.52
CCHCR1-202ENST00000396263 ARL17AQ8IVW1 177 aa11.82□□□□□ -0.52
CCHCR1-202ENST00000396263 ITPR3Q14573 2671 aa11.82□□□□□ -0.52
CCHCR1-202ENST00000396263 UNC79Q9P2D8 2635 aa11.81□□□□□ -0.52
CCHCR1-202ENST00000396263 A6NJY4 79 aa11.81□□□□□ -0.52
CCHCR1-202ENST00000396263 IGHV4-31P0DP07 118 aa11.81□□□□□ -0.52
CCHCR1-202ENST00000396263 SPINK13Q1W4C9 94 aa11.81□□□□□ -0.52
CCHCR1-202ENST00000396263 PPDPFLQ8WWR9 84 aa11.81□□□□□ -0.52
CCHCR1-202ENST00000396263 CCDC168Q8NDH2 2452 aa11.81□□□□□ -0.52
CCHCR1-202ENST00000396263 NHLRC4P0CG21 123 aaPredicted RBP11.81□□□□□ -0.52
CCHCR1-202ENST00000396263 ZNF56Q15929 161 aa11.81□□□□□ -0.52
CCHCR1-202ENST00000396263 NSUN5P1Q3KNT7 163 aa11.81□□□□□ -0.52
CCHCR1-202ENST00000396263 ZNF876PQ49A33 203 aa11.81□□□□□ -0.52
CCHCR1-202ENST00000396263 RHOHQ15669 191 aa11.8□□□□□ -0.52
CCHCR1-202ENST00000396263 SCGB1D4Q6XE38 83 aa11.8□□□□□ -0.52
CCHCR1-202ENST00000396263 TRPT1Q86TN4 253 aaKnown RBP11.8□□□□□ -0.52
CCHCR1-202ENST00000396263 TEN1Q86WV5 123 aa11.8□□□□□ -0.52
CCHCR1-202ENST00000396263 PLEKHB2Q96CS7 222 aa11.8□□□□□ -0.52
CCHCR1-202ENST00000396263 UBE2E2Q96LR5 201 aa11.8□□□□□ -0.52
CCHCR1-202ENST00000396263 HOXD3P31249 432 aaPredicted RBP11.8□□□□□ -0.52
CCHCR1-202ENST00000396263 DEFB104AQ8WTQ1 72 aa11.8□□□□□ -0.52
CCHCR1-202ENST00000396263 ZNF256Q9Y2P7 627 aaPredicted RBP11.8□□□□□ -0.52
CCHCR1-202ENST00000396263 TEX15Q9BXT5 2789 aa11.79□□□□□ -0.52
CCHCR1-202ENST00000396263 FSHBP01225 129 aa11.79□□□□□ -0.52
CCHCR1-202ENST00000396263 ZNF702PQ9H963 129 aa11.79□□□□□ -0.52
CCHCR1-202ENST00000396263 EMP1P54849 157 aa11.79□□□□□ -0.52
CCHCR1-202ENST00000396263 KLHL30-AS1Q8NEE0 82 aa11.79□□□□□ -0.52
CCHCR1-202ENST00000396263 ZFAND6Q6FIF0 208 aa11.78□□□□□ -0.52
CCHCR1-202ENST00000396263 Q6YL49 198 aa11.78□□□□□ -0.52
CCHCR1-202ENST00000396263 WFDC11Q8NEX6 87 aa11.78□□□□□ -0.52
CCHCR1-202ENST00000396263 AKAP9Q99996 3911 aa11.78□□□□□ -0.52
CCHCR1-202ENST00000396263 TRGV11A0A075B6L2 103 aa11.78□□□□□ -0.52
CCHCR1-202ENST00000396263 UBE2D1P51668 147 aa11.78□□□□□ -0.52
CCHCR1-202ENST00000396263 UBE2D3P61077 147 aa11.78□□□□□ -0.52
CCHCR1-202ENST00000396263 UBE2D2P62837 147 aa11.78□□□□□ -0.52
CCHCR1-202ENST00000396263 ZNRF2Q8NHG8 242 aa11.78□□□□□ -0.52
CCHCR1-202ENST00000396263 DUX5Q96PT3 197 aa11.77□□□□□ -0.53
CCHCR1-202ENST00000396263 FASNP49327 2511 aaKnown RBP11.77□□□□□ -0.53
CCHCR1-202ENST00000396263 SORL1Q92673 2214 aa11.77□□□□□ -0.53
CCHCR1-202ENST00000396263 A0A0J9YY99 117 aa11.77□□□□□ -0.53
CCHCR1-202ENST00000396263 TCL1BO95988 128 aa11.77□□□□□ -0.53
CCHCR1-202ENST00000396263 SRSF9Q13242 221 aaKnown RBP eCLIP11.77□□□□□ -0.53
CCHCR1-202ENST00000396263 TEX29Q8N6K0 151 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms