RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 C3orf56Q8N813 242 aa10.7□□□□□ -0.7
CLIP2-203ENST00000395060 ERG28Q9UKR5 140 aa10.7□□□□□ -0.7
CLIP2-203ENST00000395060 U3KQE9 123 aa10.7□□□□□ -0.7
CLIP2-203ENST00000395060 TRAV8-3A0A0A6YYJ7 113 aa10.69□□□□□ -0.7
CLIP2-203ENST00000395060 P0DMU3 169 aa10.69□□□□□ -0.7
CLIP2-203ENST00000395060 FAM231AP0DMU4 169 aa10.69□□□□□ -0.7
CLIP2-203ENST00000395060 FAM231CP0DMU5 169 aa10.69□□□□□ -0.7
CLIP2-203ENST00000395060 LINC00315P59091 139 aa10.69□□□□□ -0.7
CLIP2-203ENST00000395060 ATP6V0E2Q8NHE4 81 aa10.69□□□□□ -0.7
CLIP2-203ENST00000395060 MRPL53Q96EL3 112 aaKnown RBP10.69□□□□□ -0.7
CLIP2-203ENST00000395060 USP9XQ93008 2570 aaPredicted RBP10.69□□□□□ -0.7
CLIP2-203ENST00000395060 OOSP1A8MZH6 123 aa10.69□□□□□ -0.7
CLIP2-203ENST00000395060 C19orf84I3L1E1 186 aa10.69□□□□□ -0.7
CLIP2-203ENST00000395060 OVOL1O14753 267 aa10.69□□□□□ -0.7
CLIP2-203ENST00000395060 LINC01619G3V211 115 aa10.69□□□□□ -0.7
CLIP2-203ENST00000395060 VCYO14598 125 aa10.69□□□□□ -0.7
CLIP2-203ENST00000395060 GNLYP22749 145 aa10.68□□□□□ -0.7
CLIP2-203ENST00000395060 A0A0U1RRA0 63 aa10.68□□□□□ -0.7
CLIP2-203ENST00000395060 DAND5Q8N907 189 aa10.68□□□□□ -0.7
CLIP2-203ENST00000395060 DUX5Q96PT3 197 aa10.68□□□□□ -0.7
CLIP2-203ENST00000395060 POLR2KP53803 58 aaKnown RBP10.67□□□□□ -0.7
CLIP2-203ENST00000395060 SETD2Q9BYW2 2564 aaPredicted RBP10.67□□□□□ -0.7
CLIP2-203ENST00000395060 ZANQ9Y493 2812 aa10.67□□□□□ -0.7
CLIP2-203ENST00000395060 KNCNA6PVL3 124 aa10.67□□□□□ -0.7
CLIP2-203ENST00000395060 SPINK13Q1W4C9 94 aa10.67□□□□□ -0.7
CLIP2-203ENST00000395060 KIF25-AS1Q9Y6Z4 181 aa10.67□□□□□ -0.7
CLIP2-203ENST00000395060 ABCA2Q9BZC7 2435 aa10.67□□□□□ -0.7
CLIP2-203ENST00000395060 SNCGO76070 127 aa10.67□□□□□ -0.7
CLIP2-203ENST00000395060 IGHV3-33P01772 117 aa10.67□□□□□ -0.7
CLIP2-203ENST00000395060 PROK1P58294 105 aa10.66□□□□□ -0.7
CLIP2-203ENST00000395060 AMELXQ99217 191 aa10.66□□□□□ -0.7
CLIP2-203ENST00000395060 SOCS3O14543 225 aa10.66□□□□□ -0.7
CLIP2-203ENST00000395060 ZNF876PQ49A33 203 aa10.66□□□□□ -0.7
CLIP2-203ENST00000395060 TTC32Q5I0X7 151 aa10.66□□□□□ -0.7
CLIP2-203ENST00000395060 Q8N1Y9 231 aa10.66□□□□□ -0.7
CLIP2-203ENST00000395060 PRRC2AP48634 2157 aaKnown RBP10.66□□□□□ -0.7
CLIP2-203ENST00000395060 GAGE2BQ13066 116 aa10.65□□□□□ -0.7
CLIP2-203ENST00000395060 GAGE2EQ4V326 116 aa10.65□□□□□ -0.7
CLIP2-203ENST00000395060 C10orf99Q6UWK7 81 aa10.65□□□□□ -0.7
CLIP2-203ENST00000395060 GAGE2DQ9UEU5 116 aa10.65□□□□□ -0.7
CLIP2-203ENST00000395060 Q9UF83 564 aa10.65□□□□□ -0.7
CLIP2-203ENST00000395060 IGSF10Q6WRI0 2623 aa10.65□□□□□ -0.7
CLIP2-203ENST00000395060 MYO9AB2RTY4 2548 aa10.65□□□□□ -0.71
CLIP2-203ENST00000395060 CLEC2BQ92478 149 aa10.64□□□□□ -0.71
CLIP2-203ENST00000395060 MOB4Q9Y3A3 225 aa10.64□□□□□ -0.71
CLIP2-203ENST00000395060 CCDC179H3BU77 68 aa10.64□□□□□ -0.71
CLIP2-203ENST00000395060 H3BUX3 64 aa10.64□□□□□ -0.71
CLIP2-203ENST00000395060 VCX2Q9H322 139 aa10.64□□□□□ -0.71
CLIP2-203ENST00000395060 LENEPQ9Y5L5 61 aa10.64□□□□□ -0.71
CLIP2-203ENST00000395060 IGHV4-38-2P0DP08 117 aa10.64□□□□□ -0.71
CLIP2-203ENST00000395060 PAPPA-AS1Q5QFB9 102 aa10.64□□□□□ -0.71
CLIP2-203ENST00000395060 LRRK2Q5S007 2527 aa10.63□□□□□ -0.71
CLIP2-203ENST00000395060 ZNF22P17026 224 aaPredicted RBP10.63□□□□□ -0.71
CLIP2-203ENST00000395060 TMEM263Q8WUH6 116 aaKnown RBP10.63□□□□□ -0.71
CLIP2-203ENST00000395060 TRIAP1O43715 76 aa10.63□□□□□ -0.71
CLIP2-203ENST00000395060 PPP1R17O96001 155 aa10.63□□□□□ -0.71
CLIP2-203ENST00000395060 WNK1Q9H4A3 2382 aa10.63□□□□□ -0.71
CLIP2-203ENST00000395060 NDUFA4O00483 81 aa10.62□□□□□ -0.71
CLIP2-203ENST00000395060 LMO4P61968 165 aa10.62□□□□□ -0.71
CLIP2-203ENST00000395060 LINC01620Q4KN68 170 aa10.62□□□□□ -0.71
CLIP2-203ENST00000395060 ZNF625Q96I27 306 aaPredicted RBP10.62□□□□□ -0.71
CLIP2-203ENST00000395060 TMEM141Q96I45 108 aa10.62□□□□□ -0.71
CLIP2-203ENST00000395060 DUX3Q96PT4 197 aa10.62□□□□□ -0.71
CLIP2-203ENST00000395060 IGHV1-69DA0A0B4J2H0 117 aa10.62□□□□□ -0.71
CLIP2-203ENST00000395060 RHODO00212 210 aa10.62□□□□□ -0.71
CLIP2-203ENST00000395060 TMEM223A0PJW6 202 aa10.61□□□□□ -0.71
CLIP2-203ENST00000395060 CD28P10747 220 aa10.61□□□□□ -0.71
CLIP2-203ENST00000395060 TIMM17AQ99595 171 aa10.61□□□□□ -0.71
CLIP2-203ENST00000395060 TLN2Q9Y4G6 2542 aa10.61□□□□□ -0.71
CLIP2-203ENST00000395060 IGHV3-38A0A0C4DH36 116 aa10.61□□□□□ -0.71
CLIP2-203ENST00000395060 FAM223BA6NKX1 122 aa10.61□□□□□ -0.71
CLIP2-203ENST00000395060 NHLRC4P0CG21 123 aaPredicted RBP10.61□□□□□ -0.71
CLIP2-203ENST00000395060 ADAMTSL4-AS1Q5T5F5 129 aa10.61□□□□□ -0.71
CLIP2-203ENST00000395060 FAM223AQ8IWN6 122 aa10.61□□□□□ -0.71
CLIP2-203ENST00000395060 C15orf53Q8NAA6 179 aa10.61□□□□□ -0.71
CLIP2-203ENST00000395060 A0A0J9YXY3 114 aa10.6□□□□□ -0.71
CLIP2-203ENST00000395060 HIST2H2BDQ6DRA6 164 aa10.6□□□□□ -0.71
CLIP2-203ENST00000395060 IGHV4OR15-8A0A075B7B6 117 aa10.6□□□□□ -0.71
CLIP2-203ENST00000395060 A0A087WW49 117 aa10.6□□□□□ -0.71
CLIP2-203ENST00000395060 TRAV8-4A0A0B4J246 113 aa10.6□□□□□ -0.71
CLIP2-203ENST00000395060 M0QY20 66 aa10.6□□□□□ -0.71
CLIP2-203ENST00000395060 IGHV3-30-3P0DP02 117 aa10.6□□□□□ -0.71
CLIP2-203ENST00000395060 C2orf82Q6UX34 121 aa10.6□□□□□ -0.71
CLIP2-203ENST00000395060 DAZ1Q9NQZ3 744 aaKnown RBP10.6□□□□□ -0.71
CLIP2-203ENST00000395060 TMEM262E9PQX1 116 aa10.6□□□□□ -0.71
CLIP2-203ENST00000395060 GAGE5Q13069 117 aa10.6□□□□□ -0.71
CLIP2-203ENST00000395060 GAGE6Q13070 117 aa10.6□□□□□ -0.71
CLIP2-203ENST00000395060 LEPROTO15243 131 aa10.59□□□□□ -0.71
CLIP2-203ENST00000395060 ATXN8Q156A1 80 aa10.59□□□□□ -0.71
CLIP2-203ENST00000395060 IGLV4-3A0A075B6K6 122 aa10.59□□□□□ -0.71
CLIP2-203ENST00000395060 TRBV27A0A0K0K1C4 114 aa10.59□□□□□ -0.71
CLIP2-203ENST00000395060 NDUFV3P56181 108 aaKnown RBP10.59□□□□□ -0.71
CLIP2-203ENST00000395060 TIMM21Q9BVV7 248 aa10.59□□□□□ -0.71
CLIP2-203ENST00000395060 FAM19A4Q96LR4 140 aa10.58□□□□□ -0.72
CLIP2-203ENST00000395060 EPG5Q9HCE0 2579 aa10.58□□□□□ -0.72
CLIP2-203ENST00000395060 SBSPONQ8IVN8 264 aa10.58□□□□□ -0.72
CLIP2-203ENST00000395060 ZNF462Q96JM2 2506 aa10.58□□□□□ -0.72
CLIP2-203ENST00000395060 PTPN13Q12923 2485 aa10.58□□□□□ -0.72
CLIP2-203ENST00000395060 ABCA12Q86UK0 2595 aa10.58□□□□□ -0.72
CLIP2-203ENST00000395060 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 380.2 ms