RNA–Protein interactions for RNA: ENST00000394849.1

UPK3B-203, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 1,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-203ENST00000394849 FAM210AQ96ND0 272 aa12.91□□□□□ -0.34
UPK3B-203ENST00000394849 JPT2Q9H910 190 aa12.91□□□□□ -0.34
UPK3B-203ENST00000394849 P01737 135 aa12.9□□□□□ -0.34
UPK3B-203ENST00000394849 RPS20P60866 119 aaKnown RBP12.9□□□□□ -0.34
UPK3B-203ENST00000394849 ZFP2Q6ZN57 461 aa12.9□□□□□ -0.34
UPK3B-203ENST00000394849 C19orf71A6NCJ1 209 aa12.89□□□□□ -0.35
UPK3B-203ENST00000394849 RHODO00212 210 aa12.89□□□□□ -0.35
UPK3B-203ENST00000394849 FAM74A4Q5TZK3 123 aa12.89□□□□□ -0.35
UPK3B-203ENST00000394849 DAZ4Q86SG3 579 aaKnown RBP12.89□□□□□ -0.35
UPK3B-203ENST00000394849 DAZ3Q9NR90 486 aaKnown RBP12.89□□□□□ -0.35
UPK3B-203ENST00000394849 XKRY2A2RUG3 117 aa12.88□□□□□ -0.35
UPK3B-203ENST00000394849 SPANXN1Q5VSR9 72 aa12.88□□□□□ -0.35
UPK3B-203ENST00000394849 OR10AG1Q8NH19 301 aa12.88□□□□□ -0.35
UPK3B-203ENST00000394849 SFRP2Q96HF1 295 aa12.88□□□□□ -0.35
UPK3B-203ENST00000394849 SAMD10Q9BYL1 202 aa12.88□□□□□ -0.35
UPK3B-203ENST00000394849 URGCP-MRPS24S4R325 110 aa12.88□□□□□ -0.35
UPK3B-203ENST00000394849 A0A087WWL8 130 aa12.87□□□□□ -0.35
UPK3B-203ENST00000394849 SNAI2O43623 268 aa12.87□□□□□ -0.35
UPK3B-203ENST00000394849 OR5AL1P0C617 328 aa12.87□□□□□ -0.35
UPK3B-203ENST00000394849 RPL37AP61513 92 aaKnown RBP12.87□□□□□ -0.35
UPK3B-203ENST00000394849 Q8N3U1 123 aa12.87□□□□□ -0.35
UPK3B-203ENST00000394849 OCC1Q8TAD7 63 aa12.87□□□□□ -0.35
UPK3B-203ENST00000394849 TPPP3Q9BW30 176 aa12.87□□□□□ -0.35
UPK3B-203ENST00000394849 MUC21A0A0G2JKD1 596 aa12.86□□□□□ -0.35
UPK3B-203ENST00000394849 MUC21A0A140T8X8 626 aa12.86□□□□□ -0.35
UPK3B-203ENST00000394849 GZMBP10144 247 aa12.86□□□□□ -0.35
UPK3B-203ENST00000394849 SSTP61278 116 aa12.86□□□□□ -0.35
UPK3B-203ENST00000394849 C14orf177Q52M58 125 aa12.86□□□□□ -0.35
UPK3B-203ENST00000394849 SSBP4Q9BWG4 385 aaPredicted RBP12.86□□□□□ -0.35
UPK3B-203ENST00000394849 NDUFS6O75380 124 aaKnown RBP12.85□□□□□ -0.35
UPK3B-203ENST00000394849 FER1L6-AS1Q8NA97 138 aa12.85□□□□□ -0.35
UPK3B-203ENST00000394849 NUDT10Q8NFP7 164 aa12.85□□□□□ -0.35
UPK3B-203ENST00000394849 NUDT11Q96G61 164 aa12.85□□□□□ -0.35
UPK3B-203ENST00000394849 SMIM7Q9BQ49 75 aa12.85□□□□□ -0.35
UPK3B-203ENST00000394849 IGKV2D-24A0A075B6R9 120 aa12.84□□□□□ -0.35
UPK3B-203ENST00000394849 K7EN84 100 aa12.84□□□□□ -0.35
UPK3B-203ENST00000394849 SRP19P09132 144 aaKnown RBP12.84□□□□□ -0.35
UPK3B-203ENST00000394849 UFSP1Q6NVU6 142 aa12.84□□□□□ -0.35
UPK3B-203ENST00000394849 ZNF727A8MUV8 499 aa12.83□□□□□ -0.36
UPK3B-203ENST00000394849 LINC00694P0DN24 101 aa12.83□□□□□ -0.36
UPK3B-203ENST00000394849 ELOBQ15370 118 aa12.83□□□□□ -0.36
UPK3B-203ENST00000394849 RNASE7Q9H1E1 156 aaKnown RBP12.83□□□□□ -0.36
UPK3B-203ENST00000394849 GAGE12JA6NER3 117 aa12.82□□□□□ -0.36
UPK3B-203ENST00000394849 IGLC6P0CF74 106 aa12.82□□□□□ -0.36
UPK3B-203ENST00000394849 GAGE1Q13065 139 aa12.82□□□□□ -0.36
UPK3B-203ENST00000394849 GAGE4Q13068 117 aa12.82□□□□□ -0.36
UPK3B-203ENST00000394849 GAGE5Q13069 117 aa12.82□□□□□ -0.36
UPK3B-203ENST00000394849 GAGE13Q4V321 117 aa12.82□□□□□ -0.36
UPK3B-203ENST00000394849 C14orf178Q8N769 122 aaPredicted RBP12.82□□□□□ -0.36
UPK3B-203ENST00000394849 CHCHD7Q9BUK0 85 aa12.82□□□□□ -0.36
UPK3B-203ENST00000394849 RPP21Q9H633 154 aaKnown RBP12.82□□□□□ -0.36
UPK3B-203ENST00000394849 SMIM17P0DL12 118 aa12.81□□□□□ -0.36
UPK3B-203ENST00000394849 CACNG7P62955 275 aa12.81□□□□□ -0.36
UPK3B-203ENST00000394849 PEA15Q15121 130 aa12.81□□□□□ -0.36
UPK3B-203ENST00000394849 ZNF56Q15929 161 aa12.81□□□□□ -0.36
UPK3B-203ENST00000394849 AP1S3Q96PC3 154 aa12.81□□□□□ -0.36
UPK3B-203ENST00000394849 PKHD1L1Q86WI1 4243 aa12.8□□□□□ -0.36
UPK3B-203ENST00000394849 F2Z2F3 143 aa12.8□□□□□ -0.36
UPK3B-203ENST00000394849 GATCO43716 136 aaKnown RBP12.8□□□□□ -0.36
UPK3B-203ENST00000394849 Q0VG73 95 aa12.8□□□□□ -0.36
UPK3B-203ENST00000394849 ATRAIDQ6UW56 229 aa12.8□□□□□ -0.36
UPK3B-203ENST00000394849 NIT1Q86X76 327 aa12.8□□□□□ -0.36
UPK3B-203ENST00000394849 KCNIP4Q6PIL6 250 aa12.79□□□□□ -0.36
UPK3B-203ENST00000394849 KLK12Q9UKR0 248 aa12.79□□□□□ -0.36
UPK3B-203ENST00000394849 A0A087WX48 190 aa12.78□□□□□ -0.36
UPK3B-203ENST00000394849 F5H697 171 aa12.78□□□□□ -0.36
UPK3B-203ENST00000394849 RAB4BP61018 213 aa12.78□□□□□ -0.36
UPK3B-203ENST00000394849 RAB14P61106 215 aa12.78□□□□□ -0.36
UPK3B-203ENST00000394849 LYZL1Q6UWQ5 148 aa12.78□□□□□ -0.36
UPK3B-203ENST00000394849 Q6ZRU5 148 aa12.78□□□□□ -0.36
UPK3B-203ENST00000394849 FAM74A3Q4VXF1 159 aa12.77□□□□□ -0.37
UPK3B-203ENST00000394849 FAM231DQ6ZW35 169 aa12.77□□□□□ -0.37
UPK3B-203ENST00000394849 LINC01551Q86U37 167 aa12.77□□□□□ -0.37
UPK3B-203ENST00000394849 UBE2WQ96B02 151 aa12.77□□□□□ -0.37
UPK3B-203ENST00000394849 TRBV10-1A0A0K0K1A3 114 aa12.76□□□□□ -0.37
UPK3B-203ENST00000394849 TRGC1P0CF51 173 aa12.76□□□□□ -0.37
UPK3B-203ENST00000394849 MT1HL1P0DM35 61 aa12.76□□□□□ -0.37
UPK3B-203ENST00000394849 RPL36AP83881 106 aaKnown RBP12.76□□□□□ -0.37
UPK3B-203ENST00000394849 RPL36ALQ969Q0 106 aaKnown RBP12.76□□□□□ -0.37
UPK3B-203ENST00000394849 SMDT1Q9H4I9 107 aa12.76□□□□□ -0.37
UPK3B-203ENST00000394849 Q9UF83 564 aa12.76□□□□□ -0.37
UPK3B-203ENST00000394849 A8MWL6 223 aa12.75□□□□□ -0.37
UPK3B-203ENST00000394849 MGPP08493 103 aa12.75□□□□□ -0.37
UPK3B-203ENST00000394849 CTRLP40313 264 aa12.75□□□□□ -0.37
UPK3B-203ENST00000394849 HNRNPA3P51991 378 aaKnown RBP12.75□□□□□ -0.37
UPK3B-203ENST00000394849 SRSF3P84103 164 aaKnown RBP12.75□□□□□ -0.37
UPK3B-203ENST00000394849 TMEM241Q24JQ0 296 aa12.75□□□□□ -0.37
UPK3B-203ENST00000394849 C1orf43Q9BWL3 253 aa12.75□□□□□ -0.37
UPK3B-203ENST00000394849 C9JQL5 133 aa12.74□□□□□ -0.37
UPK3B-203ENST00000394849 NTF3P20783 257 aa12.74□□□□□ -0.37
UPK3B-203ENST00000394849 DGAT2L7PQ6IED9 249 aa12.74□□□□□ -0.37
UPK3B-203ENST00000394849 TWIST1Q15672 202 aa12.73□□□□□ -0.37
UPK3B-203ENST00000394849 CT83Q5H943 113 aa12.73□□□□□ -0.37
UPK3B-203ENST00000394849 WDR73Q6P4I2 378 aa12.73□□□□□ -0.37
UPK3B-203ENST00000394849 C15orf54Q8N8G6 183 aa12.73□□□□□ -0.37
UPK3B-203ENST00000394849 DNAJC30Q96LL9 226 aa12.73□□□□□ -0.37
UPK3B-203ENST00000394849 KIF25-AS1Q9Y6Z4 181 aa12.73□□□□□ -0.37
UPK3B-203ENST00000394849 TRBV7-3A0A075B6L6 115 aa12.72□□□□□ -0.37
UPK3B-203ENST00000394849 ADIRFQ15847 76 aa12.72□□□□□ -0.37
UPK3B-203ENST00000394849 OSTCQ9NRP0 149 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms