RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 IGHV1-69P01742 117 aa14.12□□□□□ -0.15
HOXC6-202ENST00000394331 CXCL5P42830 114 aa14.12□□□□□ -0.15
HOXC6-202ENST00000394331 LMO4P61968 165 aa14.12□□□□□ -0.15
HOXC6-202ENST00000394331 SDIM1Q6ZPB5 146 aa14.12□□□□□ -0.15
HOXC6-202ENST00000394331 LINC00643Q86TS7 51 aa14.12□□□□□ -0.15
HOXC6-202ENST00000394331 POLR2KP53803 58 aaKnown RBP14.11□□□□□ -0.15
HOXC6-202ENST00000394331 OR13C6PQ8NH95 151 aa14.11□□□□□ -0.15
HOXC6-202ENST00000394331 CITED2Q99967 270 aaPredicted RBP14.11□□□□□ -0.15
HOXC6-202ENST00000394331 NBASA2RRP1 2371 aa14.11□□□□□ -0.15
HOXC6-202ENST00000394331 LOC107984640A0A0U1RRK4 108 aa14.11□□□□□ -0.15
HOXC6-202ENST00000394331 EEF1AKMT3Q96AZ1 226 aa14.11□□□□□ -0.15
HOXC6-202ENST00000394331 BPESC1Q9GZL8 116 aa14.11□□□□□ -0.15
HOXC6-202ENST00000394331 CRYGAP11844 174 aa14.1□□□□□ -0.15
HOXC6-202ENST00000394331 NXPH4O95158 308 aa14.1□□□□□ -0.15
HOXC6-202ENST00000394331 MGPP08493 103 aa14.1□□□□□ -0.15
HOXC6-202ENST00000394331 BEX4Q9NWD9 120 aaPredicted RBP14.1□□□□□ -0.15
HOXC6-202ENST00000394331 TRBV7-1A0A0A6YYK4 115 aa14.09□□□□□ -0.15
HOXC6-202ENST00000394331 VCYO14598 125 aa14.09□□□□□ -0.15
HOXC6-202ENST00000394331 COX7CP15954 63 aa14.09□□□□□ -0.15
HOXC6-202ENST00000394331 CLEC19AQ6UXS0 136 aa14.09□□□□□ -0.15
HOXC6-202ENST00000394331 PHLDA3Q9Y5J5 127 aa14.09□□□□□ -0.15
HOXC6-202ENST00000394331 IGF2RP11717 2491 aa14.09□□□□□ -0.15
HOXC6-202ENST00000394331 CCDC140Q96MF4 163 aa14.08□□□□□ -0.15
HOXC6-202ENST00000394331 A0A0J9YXY3 114 aa14.08□□□□□ -0.16
HOXC6-202ENST00000394331 G3V318 75 aa14.08□□□□□ -0.16
HOXC6-202ENST00000394331 ZNF22P17026 224 aaPredicted RBP14.08□□□□□ -0.16
HOXC6-202ENST00000394331 CEMP1Q6PRD7 247 aaPredicted RBP14.08□□□□□ -0.16
HOXC6-202ENST00000394331 ZNF256Q9Y2P7 627 aaPredicted RBP14.08□□□□□ -0.16
HOXC6-202ENST00000394331 TRAV21A0A0B4J279 112 aa14.07□□□□□ -0.16
HOXC6-202ENST00000394331 CLPSL1A2RUU4 121 aa14.07□□□□□ -0.16
HOXC6-202ENST00000394331 PRR9Q5T870 116 aa14.07□□□□□ -0.16
HOXC6-202ENST00000394331 LITAFQ99732 161 aa14.07□□□□□ -0.16
HOXC6-202ENST00000394331 WNK2Q9Y3S1 2297 aa14.07□□□□□ -0.16
HOXC6-202ENST00000394331 C5orf38Q86SI9 138 aa14.07□□□□□ -0.16
HOXC6-202ENST00000394331 LRBAP50851 2863 aa14.06□□□□□ -0.16
HOXC6-202ENST00000394331 C5orf56Q8N8D9 126 aa14.06□□□□□ -0.16
HOXC6-202ENST00000394331 KIF25-AS1Q9Y6Z4 181 aa14.06□□□□□ -0.16
HOXC6-202ENST00000394331 S100A4P26447 101 aaKnown RBP14.06□□□□□ -0.16
HOXC6-202ENST00000394331 LINC00527Q9UJ94 153 aa14.06□□□□□ -0.16
HOXC6-202ENST00000394331 LINC00315P59091 139 aa14.05□□□□□ -0.16
HOXC6-202ENST00000394331 RPL39P62891 51 aaKnown RBP14.05□□□□□ -0.16
HOXC6-202ENST00000394331 TACC2O95359 2948 aa14.05□□□□□ -0.16
HOXC6-202ENST00000394331 ITLN2Q8WWU7 325 aaPredicted RBP14.05□□□□□ -0.16
HOXC6-202ENST00000394331 TRBV27A0A0K0K1C4 114 aa14.04□□□□□ -0.16
HOXC6-202ENST00000394331 IGHV3-66A0A0C4DH42 116 aa14.04□□□□□ -0.16
HOXC6-202ENST00000394331 DCANP1Q8TF63 244 aa14.04□□□□□ -0.16
HOXC6-202ENST00000394331 ATRXP46100 2492 aa14.04□□□□□ -0.16
HOXC6-202ENST00000394331 TRBV6-5A0A0K0K1A5 114 aa14.04□□□□□ -0.16
HOXC6-202ENST00000394331 LINC00477Q96M19 166 aa14.04□□□□□ -0.16
HOXC6-202ENST00000394331 DCHS2Q6V1P9 2916 aa14.03□□□□□ -0.16
HOXC6-202ENST00000394331 ZFAND2AQ8N6M9 145 aa14.03□□□□□ -0.16
HOXC6-202ENST00000394331 C2orf48Q96LS8 159 aa14.03□□□□□ -0.16
HOXC6-202ENST00000394331 MOB4Q9Y3A3 225 aa14.03□□□□□ -0.16
HOXC6-202ENST00000394331 HIST1H4AP62805 103 aaKnown RBP14.03□□□□□ -0.16
HOXC6-202ENST00000394331 NSUN5P1Q3KNT7 163 aa14.03□□□□□ -0.16
HOXC6-202ENST00000394331 GAGE2AQ6NT46 116 aa14.03□□□□□ -0.16
HOXC6-202ENST00000394331 U3KQE9 123 aa14.03□□□□□ -0.16
HOXC6-202ENST00000394331 COL6A6A6NMZ7 2263 aa14.02□□□□□ -0.16
HOXC6-202ENST00000394331 RHOHQ15669 191 aa14.02□□□□□ -0.17
HOXC6-202ENST00000394331 MED13LQ71F56 2210 aa14.02□□□□□ -0.17
HOXC6-202ENST00000394331 IGHV3OR16-13A0A075B7E8 117 aa14.01□□□□□ -0.17
HOXC6-202ENST00000394331 IGHV3-74A0A0B4J1X5 117 aa14.01□□□□□ -0.17
HOXC6-202ENST00000394331 TRAV41A0A0B4J266 112 aa14.01□□□□□ -0.17
HOXC6-202ENST00000394331 FAM223BA6NKX1 122 aa14.01□□□□□ -0.17
HOXC6-202ENST00000394331 FAM223AQ8IWN6 122 aa14.01□□□□□ -0.17
HOXC6-202ENST00000394331 SMCR5Q8TEV8 140 aa14.01□□□□□ -0.17
HOXC6-202ENST00000394331 HRNRQ86YZ3 2850 aaPredicted RBP14.01□□□□□ -0.17
HOXC6-202ENST00000394331 CLEC2BQ92478 149 aa14.01□□□□□ -0.17
HOXC6-202ENST00000394331 SPTBN1Q01082 2364 aaKnown RBP14.01□□□□□ -0.17
HOXC6-202ENST00000394331 I3L3M4 83 aa14.01□□□□□ -0.17
HOXC6-202ENST00000394331 APRG1Q8IVJ8 170 aa14.01□□□□□ -0.17
HOXC6-202ENST00000394331 PEMTQ9UBM1 199 aa14.01□□□□□ -0.17
HOXC6-202ENST00000394331 MIAQ16674 131 aa14□□□□□ -0.17
HOXC6-202ENST00000394331 C9orf139Q6ZV77 190 aa14□□□□□ -0.17
HOXC6-202ENST00000394331 ATOX1O00244 68 aa14□□□□□ -0.17
HOXC6-202ENST00000394331 IGHV3-49A0A0A0MS15 119 aa13.99□□□□□ -0.17
HOXC6-202ENST00000394331 RNASE3P12724 160 aaKnown RBP13.99□□□□□ -0.17
HOXC6-202ENST00000394331 TMEM61Q8N0U2 210 aa13.99□□□□□ -0.17
HOXC6-202ENST00000394331 C19orf84I3L1E1 186 aa13.99□□□□□ -0.17
HOXC6-202ENST00000394331 RELNP78509 3460 aa13.99□□□□□ -0.17
HOXC6-202ENST00000394331 C19orf54Q5BKX5 351 aa13.98□□□□□ -0.17
HOXC6-202ENST00000394331 SUMO4Q6EEV6 95 aa13.98□□□□□ -0.17
HOXC6-202ENST00000394331 PRORYQ9H606 182 aa13.98□□□□□ -0.17
HOXC6-202ENST00000394331 KLK5Q9Y337 293 aaPredicted RBP13.98□□□□□ -0.17
HOXC6-202ENST00000394331 TMEM258P61165 79 aa13.98□□□□□ -0.17
HOXC6-202ENST00000394331 OVOL1O14753 267 aa13.97□□□□□ -0.17
HOXC6-202ENST00000394331 FAM19A4Q96LR4 140 aa13.97□□□□□ -0.17
HOXC6-202ENST00000394331 HIVEP3Q5T1R4 2406 aa13.97□□□□□ -0.17
HOXC6-202ENST00000394331 IGHV3-30-3P0DP02 117 aa13.97□□□□□ -0.17
HOXC6-202ENST00000394331 C16orf92Q96LL3 132 aa13.97□□□□□ -0.17
HOXC6-202ENST00000394331 DAND5Q8N907 189 aa13.96□□□□□ -0.17
HOXC6-202ENST00000394331 EDA2RQ9HAV5 297 aa13.96□□□□□ -0.17
HOXC6-202ENST00000394331 GNLYP22749 145 aa13.96□□□□□ -0.18
HOXC6-202ENST00000394331 RNASE4P34096 147 aaKnown RBP13.96□□□□□ -0.18
HOXC6-202ENST00000394331 IGHV3OR16-10A0A075B7F0 116 aa13.95□□□□□ -0.18
HOXC6-202ENST00000394331 TIMM17BO60830 172 aa13.95□□□□□ -0.18
HOXC6-202ENST00000394331 PIMREGQ9BSJ6 248 aa13.95□□□□□ -0.18
HOXC6-202ENST00000394331 TIMM21Q9BVV7 248 aa13.95□□□□□ -0.18
HOXC6-202ENST00000394331 SPRY2O43597 315 aa13.95□□□□□ -0.18
HOXC6-202ENST00000394331 PF4V1P10720 104 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms