RNA–Protein interactions for RNA: ENST00000393648.6

FGFR4-203, Transcript of fibroblast growth factor receptor 4, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene FGFR4, Length 2,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR4-203ENST00000393648 H7C1H1 209 aa13.08□□□□□ -0.32
FGFR4-203ENST00000393648 SCGB1C2P0DMR2 95 aa13.08□□□□□ -0.32
FGFR4-203ENST00000393648 SYNJ2BPP57105 145 aa13.08□□□□□ -0.32
FGFR4-203ENST00000393648 TRAV4A0A0B4J268 109 aa13.07□□□□□ -0.32
FGFR4-203ENST00000393648 CRLF1O75462 422 aa13.07□□□□□ -0.32
FGFR4-203ENST00000393648 NDUFV3P56181 108 aaKnown RBP13.07□□□□□ -0.32
FGFR4-203ENST00000393648 GAGE2BQ13066 116 aa13.07□□□□□ -0.32
FGFR4-203ENST00000393648 LINC01559Q495D7 138 aa13.07□□□□□ -0.32
FGFR4-203ENST00000393648 GAGE2EQ4V326 116 aa13.07□□□□□ -0.32
FGFR4-203ENST00000393648 KLHL30-AS1Q8NEE0 82 aa13.07□□□□□ -0.32
FGFR4-203ENST00000393648 CITED1Q99966 193 aa13.07□□□□□ -0.32
FGFR4-203ENST00000393648 GAGE2DQ9UEU5 116 aa13.07□□□□□ -0.32
FGFR4-203ENST00000393648 IGHV4OR15-8A0A075B7B6 117 aa13.07□□□□□ -0.32
FGFR4-203ENST00000393648 A0A087WW49 117 aa13.07□□□□□ -0.32
FGFR4-203ENST00000393648 UBE2D3P61077 147 aa13.07□□□□□ -0.32
FGFR4-203ENST00000393648 UBE2D2P62837 147 aa13.07□□□□□ -0.32
FGFR4-203ENST00000393648 GAGE12JA6NER3 117 aa13.06□□□□□ -0.32
FGFR4-203ENST00000393648 SOCS3O14543 225 aa13.06□□□□□ -0.32
FGFR4-203ENST00000393648 GAGE7O76087 117 aa13.06□□□□□ -0.32
FGFR4-203ENST00000393648 GAGE12FP0CL80 117 aa13.06□□□□□ -0.32
FGFR4-203ENST00000393648 GAGE12GP0CL81 117 aa13.06□□□□□ -0.32
FGFR4-203ENST00000393648 GAGE12IP0CL82 117 aa13.06□□□□□ -0.32
FGFR4-203ENST00000393648 KRTAP1-1Q07627 177 aa13.06□□□□□ -0.32
FGFR4-203ENST00000393648 GAGE4Q13068 117 aa13.06□□□□□ -0.32
FGFR4-203ENST00000393648 UBE2D1P51668 147 aa13.06□□□□□ -0.32
FGFR4-203ENST00000393648 COX8CQ7Z4L0 72 aa13.06□□□□□ -0.32
FGFR4-203ENST00000393648 DUX3Q96PT4 197 aa13.06□□□□□ -0.32
FGFR4-203ENST00000393648 FAM110AQ9BQ89 295 aa13.06□□□□□ -0.32
FGFR4-203ENST00000393648 SNCGO76070 127 aa13.05□□□□□ -0.32
FGFR4-203ENST00000393648 YAE1D1Q9NRH1 226 aa13.05□□□□□ -0.32
FGFR4-203ENST00000393648 C11orf21Q9P2W6 132 aa13.05□□□□□ -0.32
FGFR4-203ENST00000393648 RBAKDNA6NC62 111 aa13.05□□□□□ -0.32
FGFR4-203ENST00000393648 FABP5P3A8MUU1 101 aa13.05□□□□□ -0.32
FGFR4-203ENST00000393648 ANK3Q12955 4377 aaKnown RBP13.05□□□□□ -0.32
FGFR4-203ENST00000393648 RHODO00212 210 aa13.04□□□□□ -0.32
FGFR4-203ENST00000393648 ELANEP08246 267 aa13.04□□□□□ -0.32
FGFR4-203ENST00000393648 TTC32Q5I0X7 151 aa13.04□□□□□ -0.32
FGFR4-203ENST00000393648 KHDC1LQ5JSQ8 128 aa13.04□□□□□ -0.32
FGFR4-203ENST00000393648 SCGB3A1Q96QR1 104 aa13.04□□□□□ -0.32
FGFR4-203ENST00000393648 ESM1Q9NQ30 184 aa13.04□□□□□ -0.32
FGFR4-203ENST00000393648 PRR9Q5T870 116 aa13.04□□□□□ -0.32
FGFR4-203ENST00000393648 NRACQ8N912 160 aa13.04□□□□□ -0.32
FGFR4-203ENST00000393648 WNK1Q9H4A3 2382 aa13.04□□□□□ -0.32
FGFR4-203ENST00000393648 HOXD3P31249 432 aaPredicted RBP13.04□□□□□ -0.32
FGFR4-203ENST00000393648 C9orf47Q6ZRZ4 202 aa13.04□□□□□ -0.32
FGFR4-203ENST00000393648 NDUFA11Q86Y39 141 aa13.04□□□□□ -0.32
FGFR4-203ENST00000393648 C11orf44Q8N8P7 122 aa13.04□□□□□ -0.32
FGFR4-203ENST00000393648 SMR3AQ99954 134 aa13.04□□□□□ -0.32
FGFR4-203ENST00000393648 VCX2Q9H322 139 aa13.04□□□□□ -0.32
FGFR4-203ENST00000393648 DNAJC9-AS1A6NH13 148 aa13.03□□□□□ -0.32
FGFR4-203ENST00000393648 TMEM262E9PQX1 116 aa13.03□□□□□ -0.32
FGFR4-203ENST00000393648 LINC01619G3V211 115 aa13.03□□□□□ -0.32
FGFR4-203ENST00000393648 TMEM89A2RUT3 159 aa13.03□□□□□ -0.32
FGFR4-203ENST00000393648 LYRM7Q5U5X0 104 aa13.03□□□□□ -0.32
FGFR4-203ENST00000393648 MRPL53Q96EL3 112 aaKnown RBP13.03□□□□□ -0.32
FGFR4-203ENST00000393648 UBE2E2Q96LR5 201 aa13.03□□□□□ -0.32
FGFR4-203ENST00000393648 IGKV3D-20A0A0C4DH25 116 aa13.02□□□□□ -0.32
FGFR4-203ENST00000393648 C9JAW5 83 aa13.02□□□□□ -0.32
FGFR4-203ENST00000393648 CD7P09564 240 aa13.02□□□□□ -0.32
FGFR4-203ENST00000393648 EMP1P54849 157 aa13.02□□□□□ -0.32
FGFR4-203ENST00000393648 CNFNQ9BYD5 112 aa13.02□□□□□ -0.32
FGFR4-203ENST00000393648 K7EMT4 169 aa13.02□□□□□ -0.33
FGFR4-203ENST00000393648 FAM159AQ6UWV7 190 aa13.02□□□□□ -0.33
FGFR4-203ENST00000393648 HIVEP2P31629 2446 aa13.01□□□□□ -0.33
FGFR4-203ENST00000393648 H7C2G1 150 aa13.01□□□□□ -0.33
FGFR4-203ENST00000393648 IFITM1P13164 125 aa13.01□□□□□ -0.33
FGFR4-203ENST00000393648 SLURP1P55000 103 aa13.01□□□□□ -0.33
FGFR4-203ENST00000393648 Q6ZSV7 163 aa13.01□□□□□ -0.33
FGFR4-203ENST00000393648 TRPT1Q86TN4 253 aaKnown RBP13.01□□□□□ -0.33
FGFR4-203ENST00000393648 C3orf56Q8N813 242 aa13.01□□□□□ -0.33
FGFR4-203ENST00000393648 RAX2Q96IS3 184 aa13.01□□□□□ -0.33
FGFR4-203ENST00000393648 Q8N2B8 174 aa13.01□□□□□ -0.33
FGFR4-203ENST00000393648 DEFB104AQ8WTQ1 72 aa13.01□□□□□ -0.33
FGFR4-203ENST00000393648 SLC25A20O43772 301 aa13□□□□□ -0.33
FGFR4-203ENST00000393648 SPRY2O43597 315 aa13□□□□□ -0.33
FGFR4-203ENST00000393648 OR10J6PQ8NGY7 276 aa13□□□□□ -0.33
FGFR4-203ENST00000393648 DCANP1Q8TF63 244 aa13□□□□□ -0.33
FGFR4-203ENST00000393648 TRAV12-1A0A0B4J245 112 aa12.99□□□□□ -0.33
FGFR4-203ENST00000393648 CFC1BP0CG36 223 aa12.99□□□□□ -0.33
FGFR4-203ENST00000393648 CFC1P0CG37 223 aa12.99□□□□□ -0.33
FGFR4-203ENST00000393648 RASL10AQ92737 203 aa12.99□□□□□ -0.33
FGFR4-203ENST00000393648 NIPBLQ6KC79 2804 aaeCLIP12.99□□□□□ -0.33
FGFR4-203ENST00000393648 SBSPONQ8IVN8 264 aa12.98□□□□□ -0.33
FGFR4-203ENST00000393648 NEXN-AS1Q8NBZ9 246 aa12.98□□□□□ -0.33
FGFR4-203ENST00000393648 SPANXN1Q5VSR9 72 aa12.98□□□□□ -0.33
FGFR4-203ENST00000393648 RNF152Q8N8N0 203 aa12.98□□□□□ -0.33
FGFR4-203ENST00000393648 OTOGQ6ZRI0 2925 aa12.98□□□□□ -0.33
FGFR4-203ENST00000393648 ZFAND2AQ8N6M9 145 aa12.97□□□□□ -0.33
FGFR4-203ENST00000393648 NTN5Q8WTR8 489 aaPredicted RBP12.97□□□□□ -0.33
FGFR4-203ENST00000393648 BAALCQ8WXS3 180 aa12.97□□□□□ -0.33
FGFR4-203ENST00000393648 OVOL1O14753 267 aa12.97□□□□□ -0.33
FGFR4-203ENST00000393648 SMIM2Q9BVW6 85 aa12.97□□□□□ -0.33
FGFR4-203ENST00000393648 IGKV3-20P01619 116 aa12.96□□□□□ -0.33
FGFR4-203ENST00000393648 LINC00477Q96M19 166 aa12.96□□□□□ -0.33
FGFR4-203ENST00000393648 RNASE4P34096 147 aaKnown RBP12.96□□□□□ -0.34
FGFR4-203ENST00000393648 A0A1W2PRX2 142 aa12.95□□□□□ -0.34
FGFR4-203ENST00000393648 C10orf126Q8N4M7 172 aa12.95□□□□□ -0.34
FGFR4-203ENST00000393648 A0A0J9YY99 117 aa12.95□□□□□ -0.34
FGFR4-203ENST00000393648 TMEM86BQ8N661 226 aa12.94□□□□□ -0.34
FGFR4-203ENST00000393648 RPL39LQ96EH5 51 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms