RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 SYS1-DBNDD2H3BUS1 97 aa6.21□□□□□ -1.42
TDP1-203ENST00000393454 VCYO14598 125 aa6.21□□□□□ -1.42
TDP1-203ENST00000393454 GAGE7O76087 117 aa6.21□□□□□ -1.42
TDP1-203ENST00000393454 GAGE12FP0CL80 117 aa6.21□□□□□ -1.42
TDP1-203ENST00000393454 GAGE12GP0CL81 117 aa6.21□□□□□ -1.42
TDP1-203ENST00000393454 GAGE12IP0CL82 117 aa6.21□□□□□ -1.42
TDP1-203ENST00000393454 P0DMU3 169 aa6.21□□□□□ -1.42
TDP1-203ENST00000393454 FAM231AP0DMU4 169 aa6.21□□□□□ -1.42
TDP1-203ENST00000393454 FAM231CP0DMU5 169 aa6.21□□□□□ -1.42
TDP1-203ENST00000393454 ORMDL2Q53FV1 153 aa6.21□□□□□ -1.42
TDP1-203ENST00000393454 UFSP1Q6NVU6 142 aa6.21□□□□□ -1.42
TDP1-203ENST00000393454 Q6ZSN1 163 aa6.21□□□□□ -1.42
TDP1-203ENST00000393454 C18orf15Q96N68 181 aa6.21□□□□□ -1.42
TDP1-203ENST00000393454 NDUFAF3Q9BU61 184 aa6.21□□□□□ -1.42
TDP1-203ENST00000393454 G3V4G9 280 aa6.2□□□□□ -1.42
TDP1-203ENST00000393454 POLR2KP53803 58 aaKnown RBP6.2□□□□□ -1.42
TDP1-203ENST00000393454 ZFP2Q6ZN57 461 aa6.2□□□□□ -1.42
TDP1-203ENST00000393454 ZNF479Q96JC4 524 aa6.2□□□□□ -1.42
TDP1-203ENST00000393454 TNFRSF18Q9Y5U5 241 aa6.2□□□□□ -1.42
TDP1-203ENST00000393454 NBEAL2Q6ZNJ1 2754 aa6.2□□□□□ -1.42
TDP1-203ENST00000393454 TRAV4A0A0B4J268 109 aa6.19□□□□□ -1.42
TDP1-203ENST00000393454 TRBV6-5A0A0K0K1A5 114 aa6.19□□□□□ -1.42
TDP1-203ENST00000393454 SMIM9A6NGZ8 99 aa6.19□□□□□ -1.42
TDP1-203ENST00000393454 RPL32P62910 135 aaKnown RBP6.19□□□□□ -1.42
TDP1-203ENST00000393454 EGFEM1PQ0D2K5 195 aa6.19□□□□□ -1.42
TDP1-203ENST00000393454 Q8N976 141 aa6.19□□□□□ -1.42
TDP1-203ENST00000393454 OR11H2Q8NH07 326 aa6.19□□□□□ -1.42
TDP1-203ENST00000393454 KIR2DL4Q99706 377 aa6.19□□□□□ -1.42
TDP1-203ENST00000393454 OVOL2Q9BRP0 275 aa6.19□□□□□ -1.42
TDP1-203ENST00000393454 X6R8D5 127 aa6.19□□□□□ -1.42
TDP1-203ENST00000393454 C20orf202A1L168 122 aa6.19□□□□□ -1.42
TDP1-203ENST00000393454 K7EMI3 77 aa6.19□□□□□ -1.42
TDP1-203ENST00000393454 ATOH7Q8N100 152 aa6.19□□□□□ -1.42
TDP1-203ENST00000393454 IFI27L1Q96BM0 104 aa6.19□□□□□ -1.42
TDP1-203ENST00000393454 DEFB130BP0DP73 79 aa6.18□□□□□ -1.42
TDP1-203ENST00000393454 DEFB130AP0DP74 79 aa6.18□□□□□ -1.42
TDP1-203ENST00000393454 PET117Q6UWS5 81 aa6.18□□□□□ -1.42
TDP1-203ENST00000393454 SPATA12Q7Z6I5 190 aa6.18□□□□□ -1.42
TDP1-203ENST00000393454 EDA2RQ9HAV5 297 aa6.18□□□□□ -1.42
TDP1-203ENST00000393454 TRBV27A0A0K0K1C4 114 aa6.18□□□□□ -1.42
TDP1-203ENST00000393454 I3L3M4 83 aa6.18□□□□□ -1.42
TDP1-203ENST00000393454 DEFB4AO15263 64 aa6.18□□□□□ -1.42
TDP1-203ENST00000393454 MDFIQ99750 246 aa6.18□□□□□ -1.42
TDP1-203ENST00000393454 VAMP8Q9BV40 100 aa6.18□□□□□ -1.42
TDP1-203ENST00000393454 PRO1933Q9H354 126 aa6.18□□□□□ -1.42
TDP1-203ENST00000393454 Q9UF83 564 aa6.18□□□□□ -1.42
TDP1-203ENST00000393454 ATP5LO75964 103 aa6.17□□□□□ -1.42
TDP1-203ENST00000393454 PRSS1P07477 247 aa6.17□□□□□ -1.42
TDP1-203ENST00000393454 C2orf66Q6UXQ4 117 aa6.17□□□□□ -1.42
TDP1-203ENST00000393454 TEX43Q6ZNM6 134 aa6.17□□□□□ -1.42
TDP1-203ENST00000393454 NEXN-AS1Q8NBZ9 246 aa6.17□□□□□ -1.42
TDP1-203ENST00000393454 SCGB3A1Q96QR1 104 aa6.17□□□□□ -1.42
TDP1-203ENST00000393454 PMCHL2Q9BQD1 86 aa6.17□□□□□ -1.42
TDP1-203ENST00000393454 CMYA5Q8N3K9 4069 aa6.17□□□□□ -1.42
TDP1-203ENST00000393454 TRGV4A0A0C4DH28 118 aa6.16□□□□□ -1.42
TDP1-203ENST00000393454 IGHV4-28A0A0C4DH34 117 aa6.16□□□□□ -1.42
TDP1-203ENST00000393454 G0S2P27469 103 aa6.16□□□□□ -1.42
TDP1-203ENST00000393454 RIPPLY3P57055 190 aa6.16□□□□□ -1.42
TDP1-203ENST00000393454 ZNF664Q8N3J9 261 aa6.16□□□□□ -1.42
TDP1-203ENST00000393454 TOMM6Q96B49 74 aa6.16□□□□□ -1.42
TDP1-203ENST00000393454 RNF183Q96D59 192 aa6.16□□□□□ -1.42
TDP1-203ENST00000393454 DNAJC30Q96LL9 226 aa6.16□□□□□ -1.42
TDP1-203ENST00000393454 PAM16Q9Y3D7 125 aa6.16□□□□□ -1.42
TDP1-203ENST00000393454 K7EQD1 137 aa6.16□□□□□ -1.42
TDP1-203ENST00000393454 TSHBP01222 138 aa6.16□□□□□ -1.42
TDP1-203ENST00000393454 ZNRF2Q8NHG8 242 aa6.16□□□□□ -1.42
TDP1-203ENST00000393454 PHLDA1Q8WV24 401 aaPredicted RBP6.16□□□□□ -1.42
TDP1-203ENST00000393454 CYSLTR1Q9Y271 337 aa6.16□□□□□ -1.42
TDP1-203ENST00000393454 TP53TG1Q9Y2A0 90 aa6.16□□□□□ -1.42
TDP1-203ENST00000393454 IGHV3-38A0A0C4DH36 116 aa6.15□□□□□ -1.42
TDP1-203ENST00000393454 TSTD3H0UI37 97 aa6.15□□□□□ -1.42
TDP1-203ENST00000393454 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.15□□□□□ -1.42
TDP1-203ENST00000393454 CIDEAO60543 219 aa6.15□□□□□ -1.42
TDP1-203ENST00000393454 PKIAP61925 76 aa6.15□□□□□ -1.42
TDP1-203ENST00000393454 SAMD5Q5TGI4 173 aa6.15□□□□□ -1.42
TDP1-203ENST00000393454 FAM222AQ5U5X8 452 aa6.15□□□□□ -1.42
TDP1-203ENST00000393454 LINC01545Q5VT33 79 aa6.15□□□□□ -1.42
TDP1-203ENST00000393454 Q6ZN92 141 aa6.15□□□□□ -1.42
TDP1-203ENST00000393454 SLC25A29Q8N8R3 303 aa6.15□□□□□ -1.42
TDP1-203ENST00000393454 MIFP14174 115 aa6.14□□□□□ -1.43
TDP1-203ENST00000393454 RPL39P62891 51 aaKnown RBP6.14□□□□□ -1.43
TDP1-203ENST00000393454 RPL36AP83881 106 aaKnown RBP6.14□□□□□ -1.43
TDP1-203ENST00000393454 RHOHQ15669 191 aa6.14□□□□□ -1.43
TDP1-203ENST00000393454 MAJINQ3KP22 176 aa6.14□□□□□ -1.43
TDP1-203ENST00000393454 SPATA45Q537H7 98 aa6.14□□□□□ -1.43
TDP1-203ENST00000393454 RPL36ALQ969Q0 106 aaKnown RBP6.14□□□□□ -1.43
TDP1-203ENST00000393454 TRBV7-3A0A075B6L6 115 aa6.14□□□□□ -1.43
TDP1-203ENST00000393454 GAGE12JA6NER3 117 aa6.14□□□□□ -1.43
TDP1-203ENST00000393454 LYRM9A8MSI8 78 aa6.14□□□□□ -1.43
TDP1-203ENST00000393454 A8MZ25 164 aa6.14□□□□□ -1.43
TDP1-203ENST00000393454 PRB2P02812 416 aaPredicted RBP6.14□□□□□ -1.43
TDP1-203ENST00000393454 GAGE1Q13065 139 aa6.14□□□□□ -1.43
TDP1-203ENST00000393454 GAGE4Q13068 117 aa6.14□□□□□ -1.43
TDP1-203ENST00000393454 GAGE5Q13069 117 aa6.14□□□□□ -1.43
TDP1-203ENST00000393454 GAGE13Q4V321 117 aa6.14□□□□□ -1.43
TDP1-203ENST00000393454 LGALS9CQ6DKI2 356 aa6.14□□□□□ -1.43
TDP1-203ENST00000393454 NOTCH1P46531 2555 aa6.14□□□□□ -1.43
TDP1-203ENST00000393454 TRAV9-2A0A087WT02 112 aa6.13□□□□□ -1.43
TDP1-203ENST00000393454 TRBV10-1A0A0K0K1A3 114 aa6.13□□□□□ -1.43
TDP1-203ENST00000393454 HSBP1L1C9JCN9 74 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms