RNA–Protein interactions for RNA: ENST00000392334.6

CSNK1D-203, Transcript of casein kinase 1 delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1D, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-203ENST00000392334 PROK1P58294 105 aa14.77□□□□□ -0.04
CSNK1D-203ENST00000392334 RPL32P62910 135 aaKnown RBP14.77□□□□□ -0.04
CSNK1D-203ENST00000392334 RAX2Q96IS3 184 aa14.77□□□□□ -0.04
CSNK1D-203ENST00000392334 C2orf66Q6UXQ4 117 aa14.76□□□□□ -0.05
CSNK1D-203ENST00000392334 C14orf178Q8N769 122 aaPredicted RBP14.76□□□□□ -0.05
CSNK1D-203ENST00000392334 BAALCQ8WXS3 180 aa14.76□□□□□ -0.05
CSNK1D-203ENST00000392334 RPL39LQ96EH5 51 aaKnown RBP14.76□□□□□ -0.05
CSNK1D-203ENST00000392334 RNASE3P12724 160 aaKnown RBP14.75□□□□□ -0.05
CSNK1D-203ENST00000392334 LINC01549A6NIU2 74 aa14.75□□□□□ -0.05
CSNK1D-203ENST00000392334 F6UB75 175 aa14.75□□□□□ -0.05
CSNK1D-203ENST00000392334 J3KRW8 73 aa14.75□□□□□ -0.05
CSNK1D-203ENST00000392334 RRN3P1Q2M238 152 aa14.75□□□□□ -0.05
CSNK1D-203ENST00000392334 TEX48A0A1B0GUV7 120 aa14.74□□□□□ -0.05
CSNK1D-203ENST00000392334 TSSC4Q9Y5U2 329 aaPredicted RBP14.74□□□□□ -0.05
CSNK1D-203ENST00000392334 KRTAP10-3P60369 221 aa14.73□□□□□ -0.05
CSNK1D-203ENST00000392334 PRIMA1Q86XR5 153 aa14.73□□□□□ -0.05
CSNK1D-203ENST00000392334 DCANP1Q8TF63 244 aa14.73□□□□□ -0.05
CSNK1D-203ENST00000392334 CCL24O00175 119 aa14.73□□□□□ -0.05
CSNK1D-203ENST00000392334 MGPP08493 103 aa14.73□□□□□ -0.05
CSNK1D-203ENST00000392334 RNASE4P34096 147 aaKnown RBP14.73□□□□□ -0.05
CSNK1D-203ENST00000392334 RPL24P83731 157 aaKnown RBP14.73□□□□□ -0.05
CSNK1D-203ENST00000392334 NSUN5P1Q3KNT7 163 aa14.73□□□□□ -0.05
CSNK1D-203ENST00000392334 KIF25-AS1Q9Y6Z4 181 aa14.73□□□□□ -0.05
CSNK1D-203ENST00000392334 PRSS29PA6NIE9 313 aa14.72□□□□□ -0.05
CSNK1D-203ENST00000392334 WNK1Q9H4A3 2382 aa14.72□□□□□ -0.05
CSNK1D-203ENST00000392334 GNRH2O43555 120 aa14.71□□□□□ -0.05
CSNK1D-203ENST00000392334 SPRY2O43597 315 aa14.71□□□□□ -0.05
CSNK1D-203ENST00000392334 LINC00315P59091 139 aa14.71□□□□□ -0.05
CSNK1D-203ENST00000392334 PRADC1Q9BSG0 188 aa14.71□□□□□ -0.05
CSNK1D-203ENST00000392334 SPANXB1Q9NS25 103 aaPredicted RBP14.71□□□□□ -0.05
CSNK1D-203ENST00000392334 KLLNB2CW77 178 aa14.7□□□□□ -0.06
CSNK1D-203ENST00000392334 ZNF688P0C7X2 276 aa14.7□□□□□ -0.06
CSNK1D-203ENST00000392334 PEMTQ9UBM1 199 aa14.7□□□□□ -0.06
CSNK1D-203ENST00000392334 PAPPA-AS1Q5QFB9 102 aa14.69□□□□□ -0.06
CSNK1D-203ENST00000392334 CYSLTR1Q9Y271 337 aa14.69□□□□□ -0.06
CSNK1D-203ENST00000392334 TMEM238C9JI98 176 aa14.68□□□□□ -0.06
CSNK1D-203ENST00000392334 KRTAP24-1Q3LI83 254 aa14.68□□□□□ -0.06
CSNK1D-203ENST00000392334 SAMD13Q5VXD3 122 aa14.68□□□□□ -0.06
CSNK1D-203ENST00000392334 AGRNO00468 2067 aa14.68□□□□□ -0.06
CSNK1D-203ENST00000392334 CRYGDP07320 174 aa14.68□□□□□ -0.06
CSNK1D-203ENST00000392334 POLR2KP53803 58 aaKnown RBP14.68□□□□□ -0.06
CSNK1D-203ENST00000392334 WFDC2Q14508 124 aa14.68□□□□□ -0.06
CSNK1D-203ENST00000392334 WFDC12Q8WWY7 111 aa14.68□□□□□ -0.06
CSNK1D-203ENST00000392334 PRO0461Q9UI25 63 aa14.68□□□□□ -0.06
CSNK1D-203ENST00000392334 J3QR89 54 aa14.67□□□□□ -0.06
CSNK1D-203ENST00000392334 ID1P41134 155 aa14.67□□□□□ -0.06
CSNK1D-203ENST00000392334 FHL3Q13643 280 aa14.67□□□□□ -0.06
CSNK1D-203ENST00000392334 MORN3Q6PF18 240 aaPredicted RBP14.67□□□□□ -0.06
CSNK1D-203ENST00000392334 TMEM238LA0A1B0GVL6 79 aa14.66□□□□□ -0.06
CSNK1D-203ENST00000392334 A6NJY4 79 aa14.66□□□□□ -0.06
CSNK1D-203ENST00000392334 ADARB2-AS1A8MUL3 147 aa14.66□□□□□ -0.06
CSNK1D-203ENST00000392334 H3BMG7 143 aa14.66□□□□□ -0.06
CSNK1D-203ENST00000392334 IGIPA6NJ69 53 aa14.66□□□□□ -0.06
CSNK1D-203ENST00000392334 ZNF815PA8K554 130 aa14.66□□□□□ -0.06
CSNK1D-203ENST00000392334 DUSP14O95147 198 aaKnown RBP14.66□□□□□ -0.06
CSNK1D-203ENST00000392334 TMEM61Q8N0U2 210 aa14.66□□□□□ -0.06
CSNK1D-203ENST00000392334 DYNLRB2Q8TF09 96 aa14.66□□□□□ -0.06
CSNK1D-203ENST00000392334 TMEM141Q96I45 108 aa14.66□□□□□ -0.06
CSNK1D-203ENST00000392334 SORL1Q92673 2214 aa14.65□□□□□ -0.06
CSNK1D-203ENST00000392334 IGLV4-69A0A075B6H9 119 aa14.65□□□□□ -0.06
CSNK1D-203ENST00000392334 K7EQG2 157 aa14.65□□□□□ -0.06
CSNK1D-203ENST00000392334 TSHBP01222 138 aa14.65□□□□□ -0.06
CSNK1D-203ENST00000392334 GAGE13Q4V321 117 aa14.65□□□□□ -0.06
CSNK1D-203ENST00000392334 UBE2D1P51668 147 aa14.65□□□□□ -0.06
CSNK1D-203ENST00000392334 TIMM17AQ99595 171 aa14.65□□□□□ -0.06
CSNK1D-203ENST00000392334 VCYO14598 125 aa14.64□□□□□ -0.07
CSNK1D-203ENST00000392334 SNRPD3P62318 126 aaKnown RBP14.64□□□□□ -0.07
CSNK1D-203ENST00000392334 CD300EQ496F6 205 aaPredicted RBP14.64□□□□□ -0.07
CSNK1D-203ENST00000392334 FAM159AQ6UWV7 190 aa14.64□□□□□ -0.07
CSNK1D-203ENST00000392334 ZFP2Q6ZN57 461 aa14.64□□□□□ -0.07
CSNK1D-203ENST00000392334 VWFP04275 2813 aa14.63□□□□□ -0.07
CSNK1D-203ENST00000392334 IGKV3-20P01619 116 aa14.63□□□□□ -0.07
CSNK1D-203ENST00000392334 SCGB1A1P11684 91 aa14.63□□□□□ -0.07
CSNK1D-203ENST00000392334 HERVK_113P61574 105 aa14.63□□□□□ -0.07
CSNK1D-203ENST00000392334 PMVKQ15126 192 aa14.63□□□□□ -0.07
CSNK1D-203ENST00000392334 SUMO4Q6EEV6 95 aa14.63□□□□□ -0.07
CSNK1D-203ENST00000392334 TP53TG1Q9Y2A0 90 aa14.63□□□□□ -0.07
CSNK1D-203ENST00000392334 TRBV6-5A0A0K0K1A5 114 aa14.63□□□□□ -0.07
CSNK1D-203ENST00000392334 C11orf86A6NJI1 115 aa14.63□□□□□ -0.07
CSNK1D-203ENST00000392334 DEFB114Q30KQ6 69 aa14.63□□□□□ -0.07
CSNK1D-203ENST00000392334 ODF3Q96PU9 254 aa14.63□□□□□ -0.07
CSNK1D-203ENST00000392334 AMTNQ6UX39 209 aa14.62□□□□□ -0.07
CSNK1D-203ENST00000392334 PLEKHB2Q96CS7 222 aa14.62□□□□□ -0.07
CSNK1D-203ENST00000392334 MUC4Q99102 2169 aa14.62□□□□□ -0.07
CSNK1D-203ENST00000392334 SCGB1D4Q6XE38 83 aa14.61□□□□□ -0.07
CSNK1D-203ENST00000392334 KIR2DL4Q99706 377 aa14.61□□□□□ -0.07
CSNK1D-203ENST00000392334 SPATA25Q9BR10 227 aa14.61□□□□□ -0.07
CSNK1D-203ENST00000392334 PGPEP1Q9NXJ5 209 aa14.61□□□□□ -0.07
CSNK1D-203ENST00000392334 COL6A5A8TX70 2615 aa14.61□□□□□ -0.07
CSNK1D-203ENST00000392334 STAB1Q9NY15 2570 aa14.61□□□□□ -0.07
CSNK1D-203ENST00000392334 TRBV27A0A0K0K1C4 114 aa14.6□□□□□ -0.07
CSNK1D-203ENST00000392334 ETDBQ3ZM63 59 aa14.59□□□□□ -0.07
CSNK1D-203ENST00000392334 C9orf85Q96MD7 179 aa14.59□□□□□ -0.07
CSNK1D-203ENST00000392334 SIGMAR1Q99720 223 aa14.59□□□□□ -0.07
CSNK1D-203ENST00000392334 SPAG8Q99932 426 aaPredicted RBP14.59□□□□□ -0.07
CSNK1D-203ENST00000392334 GAGE12HA6NDE8 117 aa14.59□□□□□ -0.07
CSNK1D-203ENST00000392334 CD7P09564 240 aa14.59□□□□□ -0.07
CSNK1D-203ENST00000392334 SRSF9Q13242 221 aaKnown RBP eCLIP14.59□□□□□ -0.071e-6■■□□□ 12.6
CSNK1D-203ENST00000392334 SH2D6Q7Z4S9 175 aa14.59□□□□□ -0.07
CSNK1D-203ENST00000392334 TRRAPQ9Y4A5 3859 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms