RNA–Protein interactions for RNA: ENST00000390964.1

SNORA40.3-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 122 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.3-201ENST00000390964 Q5VV11 94 aa-1.27□□□□□ -2.61
SNORA40.3-201ENST00000390964 CSPG4Q6UVK1 2322 aa-1.27□□□□□ -2.61
SNORA40.3-201ENST00000390964 MUC22E2RYF6 1773 aaPredicted RBP-1.28□□□□□ -2.61
SNORA40.3-201ENST00000390964 S100GP29377 79 aa-1.28□□□□□ -2.61
SNORA40.3-201ENST00000390964 PPP1R2P3Q6NXS1 205 aa-1.28□□□□□ -2.61
SNORA40.3-201ENST00000390964 SKA2Q8WVK7 121 aaPredicted RBP-1.28□□□□□ -2.61
SNORA40.3-201ENST00000390964 ZMYM4Q5VZL5 1548 aa-1.29□□□□□ -2.62
SNORA40.3-201ENST00000390964 ACANP16112 2415 aa-1.29□□□□□ -2.62
SNORA40.3-201ENST00000390964 IBTKQ9P2D0 1353 aaPredicted RBP-1.29□□□□□ -2.62
SNORA40.3-201ENST00000390964 TRAV36DV7A0A075B6V5 113 aa-1.29□□□□□ -2.62
SNORA40.3-201ENST00000390964 SCTP09683 121 aa-1.29□□□□□ -2.62
SNORA40.3-201ENST00000390964 LSM2Q9Y333 95 aaKnown RBP-1.29□□□□□ -2.62
SNORA40.3-201ENST00000390964 A0A1B0GX51 115 aa-1.3□□□□□ -2.62
SNORA40.3-201ENST00000390964 NDUFA12Q9UI09 145 aa-1.3□□□□□ -2.62
SNORA40.3-201ENST00000390964 V9GYQ6 96 aa-1.3□□□□□ -2.62
SNORA40.3-201ENST00000390964 IFT172Q9UG01 1749 aa-1.3□□□□□ -2.62
SNORA40.3-201ENST00000390964 LRP1BQ9NZR2 4599 aa-1.3□□□□□ -2.62
SNORA40.3-201ENST00000390964 BCL9LQ86UU0 1499 aa-1.31□□□□□ -2.62
SNORA40.3-201ENST00000390964 LINC01545Q5VT33 79 aa-1.31□□□□□ -2.62
SNORA40.3-201ENST00000390964 TCTE3Q8IZS6 198 aa-1.31□□□□□ -2.62
SNORA40.3-201ENST00000390964 DDA1Q9BW61 102 aa-1.31□□□□□ -2.62
SNORA40.3-201ENST00000390964 SPCS1Q9Y6A9 102 aa-1.31□□□□□ -2.62
SNORA40.3-201ENST00000390964 WNK3Q9BYP7 1800 aa-1.31□□□□□ -2.62
SNORA40.3-201ENST00000390964 ERCC6Q03468 1493 aa-1.31□□□□□ -2.62
SNORA40.3-201ENST00000390964 MAP1AP78559 2803 aaPredicted RBP-1.32□□□□□ -2.62
SNORA40.3-201ENST00000390964 TNFSF15O95150 251 aa-1.32□□□□□ -2.62
SNORA40.3-201ENST00000390964 ZNF609O15014 1411 aa-1.32□□□□□ -2.62
SNORA40.3-201ENST00000390964 PLXNB2O15031 1838 aa-1.33□□□□□ -2.62
SNORA40.3-201ENST00000390964 FABP1P07148 127 aa-1.33□□□□□ -2.62
SNORA40.3-201ENST00000390964 CLPSL1A2RUU4 121 aa-1.34□□□□□ -2.62
SNORA40.3-201ENST00000390964 UBE2D1P51668 147 aa-1.34□□□□□ -2.62
SNORA40.3-201ENST00000390964 HIGD1AQ9Y241 93 aa-1.34□□□□□ -2.62
SNORA40.3-201ENST00000390964 FLNBO75369 2602 aaKnown RBP-1.34□□□□□ -2.62
SNORA40.3-201ENST00000390964 USF3Q68DE3 2245 aa-1.34□□□□□ -2.62
SNORA40.3-201ENST00000390964 KDM3BQ7LBC6 1761 aa-1.34□□□□□ -2.62
SNORA40.3-201ENST00000390964 MYH13Q9UKX3 1938 aa-1.34□□□□□ -2.62
SNORA40.3-201ENST00000390964 ANKRD17O75179 2603 aaKnown RBP-1.35□□□□□ -2.62
SNORA40.3-201ENST00000390964 CMPK1P30085 196 aa-1.35□□□□□ -2.63
SNORA40.3-201ENST00000390964 SPANXN1Q5VSR9 72 aa-1.35□□□□□ -2.63
SNORA40.3-201ENST00000390964 VSTM2AQ8TAG5 236 aa-1.35□□□□□ -2.63
SNORA40.3-201ENST00000390964 TRBV20-1A0A075B6N2 111 aa-1.36□□□□□ -2.63
SNORA40.3-201ENST00000390964 TSTD3H0UI37 97 aa-1.36□□□□□ -2.63
SNORA40.3-201ENST00000390964 C9orf116Q5BN46 136 aaPredicted RBP-1.36□□□□□ -2.63
SNORA40.3-201ENST00000390964 BAGE3Q86Y29 109 aa-1.36□□□□□ -2.63
SNORA40.3-201ENST00000390964 C10orf82Q8WW14 230 aa-1.36□□□□□ -2.63
SNORA40.3-201ENST00000390964 RPRMQ9NS64 109 aa-1.36□□□□□ -2.63
SNORA40.3-201ENST00000390964 HSPB11Q9Y547 144 aa-1.36□□□□□ -2.63
SNORA40.3-201ENST00000390964 LRRC37A3O60309 1634 aa-1.37□□□□□ -2.63
SNORA40.3-201ENST00000390964 EP300Q09472 2414 aaPredicted RBP-1.37□□□□□ -2.63
SNORA40.3-201ENST00000390964 C10orf71Q711Q0 1435 aa-1.37□□□□□ -2.63
SNORA40.3-201ENST00000390964 SMIM6P0DI80 62 aa-1.37□□□□□ -2.63
SNORA40.3-201ENST00000390964 SCN3BQ9NY72 215 aa-1.37□□□□□ -2.63
SNORA40.3-201ENST00000390964 GINS2Q9Y248 185 aa-1.37□□□□□ -2.63
SNORA40.3-201ENST00000390964 SETXQ7Z333 2677 aaKnown RBP-1.38□□□□□ -2.63
SNORA40.3-201ENST00000390964 GVINP1Q7Z2Y8 2422 aa-1.38□□□□□ -2.63
SNORA40.3-201ENST00000390964 APOC4-APOC2K7ER74 178 aa-1.38□□□□□ -2.63
SNORA40.3-201ENST00000390964 CFAP126Q5VTH2 177 aa-1.38□□□□□ -2.63
SNORA40.3-201ENST00000390964 SPANXCQ9NY87 97 aa-1.38□□□□□ -2.63
SNORA40.3-201ENST00000390964 LAMC1P11047 1609 aa-1.38□□□□□ -2.63
SNORA40.3-201ENST00000390964 SPTA1P02549 2419 aa-1.39□□□□□ -2.63
SNORA40.3-201ENST00000390964 NPFFO15130 113 aa-1.39□□□□□ -2.63
SNORA40.3-201ENST00000390964 IFNA17P01571 189 aa-1.39□□□□□ -2.63
SNORA40.3-201ENST00000390964 PIRTP0C851 137 aa-1.39□□□□□ -2.63
SNORA40.3-201ENST00000390964 SAR1AQ9NR31 198 aa-1.39□□□□□ -2.63
SNORA40.3-201ENST00000390964 STAB2Q8WWQ8 2551 aa-1.39□□□□□ -2.63
SNORA40.3-201ENST00000390964 NBEAL1Q6ZS30 2694 aa-1.39□□□□□ -2.63
SNORA40.3-201ENST00000390964 FAM92AA1XBS5 289 aa-1.4□□□□□ -2.63
SNORA40.3-201ENST00000390964 K7EQZ3 153 aa-1.4□□□□□ -2.63
SNORA40.3-201ENST00000390964 BCE1O60756 84 aa-1.4□□□□□ -2.63
SNORA40.3-201ENST00000390964 NCS1P62166 190 aa-1.4□□□□□ -2.63
SNORA40.3-201ENST00000390964 SYNJ1O43426 1573 aa-1.4□□□□□ -2.63
SNORA40.3-201ENST00000390964 RPL7L1Q6DKI1 246 aaKnown RBP-1.41□□□□□ -2.64
SNORA40.3-201ENST00000390964 SMIM15Q7Z3B0 74 aa-1.41□□□□□ -2.64
SNORA40.3-201ENST00000390964 NPVFQ9HCQ7 196 aa-1.41□□□□□ -2.64
SNORA40.3-201ENST00000390964 LRP6O75581 1613 aa-1.41□□□□□ -2.64
SNORA40.3-201ENST00000390964 MYO7BQ6PIF6 2116 aa-1.42□□□□□ -2.64
SNORA40.3-201ENST00000390964 ATRQ13535 2644 aa-1.42□□□□□ -2.64
SNORA40.3-201ENST00000390964 A6NIN4 97 aa-1.42□□□□□ -2.64
SNORA40.3-201ENST00000390964 CCDC153Q494R4 210 aa-1.42□□□□□ -2.64
SNORA40.3-201ENST00000390964 MIC13Q5XKP0 118 aa-1.42□□□□□ -2.64
SNORA40.3-201ENST00000390964 ZNF818PQ6ZRF7 136 aa-1.42□□□□□ -2.64
SNORA40.3-201ENST00000390964 DAPK1P53355 1430 aa-1.42□□□□□ -2.64
SNORA40.3-201ENST00000390964 DBIP07108 87 aaKnown RBP-1.43□□□□□ -2.64
SNORA40.3-201ENST00000390964 S100A3P33764 101 aa-1.43□□□□□ -2.64
SNORA40.3-201ENST00000390964 DCDP81605 110 aaKnown RBP-1.43□□□□□ -2.64
SNORA40.3-201ENST00000390964 MORN2Q502X0 79 aa-1.43□□□□□ -2.64
SNORA40.3-201ENST00000390964 MMGT1Q8N4V1 131 aa-1.43□□□□□ -2.64
SNORA40.3-201ENST00000390964 TP53AIP1Q9HCN2 124 aa-1.43□□□□□ -2.64
SNORA40.3-201ENST00000390964 SPANXA1Q9NS26 97 aa-1.43□□□□□ -2.64
SNORA40.3-201ENST00000390964 UBE2G1P62253 170 aa-1.44□□□□□ -2.64
SNORA40.3-201ENST00000390964 CDK5RAP2Q96SN8 1893 aa-1.44□□□□□ -2.64
SNORA40.3-201ENST00000390964 ADGRB1O14514 1584 aa-1.45□□□□□ -2.64
SNORA40.3-201ENST00000390964 ERCC6L2Q5T890 1561 aa-1.45□□□□□ -2.64
SNORA40.3-201ENST00000390964 H0YJX3 145 aa-1.45□□□□□ -2.64
SNORA40.3-201ENST00000390964 CHD8Q9HCK8 2581 aa-1.45□□□□□ -2.64
SNORA40.3-201ENST00000390964 ARHGEF10O15013 1369 aa-1.46□□□□□ -2.64
SNORA40.3-201ENST00000390964 I3L2K1 104 aa-1.46□□□□□ -2.64
SNORA40.3-201ENST00000390964 NBEAP1P0C6P0 100 aa-1.46□□□□□ -2.64
SNORA40.3-201ENST00000390964 TMEM2Q9UHN6 1383 aa-1.47□□□□□ -2.64
SNORA40.3-201ENST00000390964 PXDNQ92626 1479 aa-1.47□□□□□ -2.64
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms