RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 LYRM9A8MSI8 78 aa7.76□□□□□ -1.17
PKP4-201ENST00000389757 FAM222AQ5U5X8 452 aa7.76□□□□□ -1.17
PKP4-201ENST00000389757 ZFAND3Q9H8U3 227 aa7.76□□□□□ -1.17
PKP4-201ENST00000389757 CEP295Q9C0D2 2601 aa7.76□□□□□ -1.17
PKP4-201ENST00000389757 TIRAPP58753 221 aa7.75□□□□□ -1.17
PKP4-201ENST00000389757 IGLC3P0DOY3 106 aa7.75□□□□□ -1.17
PKP4-201ENST00000389757 GAGE2EQ4V326 116 aa7.75□□□□□ -1.17
PKP4-201ENST00000389757 LINC00482Q8N8I6 264 aa7.75□□□□□ -1.17
PKP4-201ENST00000389757 GAGE2DQ9UEU5 116 aa7.75□□□□□ -1.17
PKP4-201ENST00000389757 Q6ZTI0 123 aa7.75□□□□□ -1.17
PKP4-201ENST00000389757 PRO1854Q9UHT4 67 aa7.75□□□□□ -1.17
PKP4-201ENST00000389757 NDUFA1O15239 70 aa7.75□□□□□ -1.17
PKP4-201ENST00000389757 HIST1H4AP62805 103 aaKnown RBP7.75□□□□□ -1.17
PKP4-201ENST00000389757 GAGE2AQ6NT46 116 aa7.75□□□□□ -1.17
PKP4-201ENST00000389757 TRAV26-1A0A087WT03 109 aa7.74□□□□□ -1.17
PKP4-201ENST00000389757 SMR3AQ99954 134 aa7.74□□□□□ -1.17
PKP4-201ENST00000389757 AVPP01185 164 aa7.74□□□□□ -1.17
PKP4-201ENST00000389757 TRBV20-1A0A075B6N2 111 aa7.74□□□□□ -1.17
PKP4-201ENST00000389757 SOCS3O14543 225 aa7.74□□□□□ -1.17
PKP4-201ENST00000389757 RPL39P62891 51 aaKnown RBP7.74□□□□□ -1.17
PKP4-201ENST00000389757 C19orf71A6NCJ1 209 aa7.74□□□□□ -1.17
PKP4-201ENST00000389757 C21orf62-AS1Q17RA5 79 aa7.74□□□□□ -1.17
PKP4-201ENST00000389757 COX7B2Q8TF08 81 aa7.74□□□□□ -1.17
PKP4-201ENST00000389757 PRSS47A8MTI9 375 aa7.73□□□□□ -1.17
PKP4-201ENST00000389757 DEFB131BA0A096LNP1 70 aa7.73□□□□□ -1.17
PKP4-201ENST00000389757 INAFM2P0DMQ5 153 aa7.73□□□□□ -1.17
PKP4-201ENST00000389757 MIFP14174 115 aa7.73□□□□□ -1.17
PKP4-201ENST00000389757 ETDCA0A1B0GVM5 59 aa7.73□□□□□ -1.17
PKP4-201ENST00000389757 ZNF80P51504 273 aaPredicted RBP7.73□□□□□ -1.17
PKP4-201ENST00000389757 HIST2H2BDQ6DRA6 164 aa7.73□□□□□ -1.17
PKP4-201ENST00000389757 C20orf173Q96LM9 149 aa7.73□□□□□ -1.17
PKP4-201ENST00000389757 FAM110AQ9BQ89 295 aa7.73□□□□□ -1.17
PKP4-201ENST00000389757 TP53TG3Q9ULZ0 132 aa7.73□□□□□ -1.17
PKP4-201ENST00000389757 NACAE9PAV3 2078 aa7.73□□□□□ -1.17
PKP4-201ENST00000389757 RPL32P62910 135 aaKnown RBP7.73□□□□□ -1.17
PKP4-201ENST00000389757 ZNF295-AS1Q8N0V1 137 aa7.72□□□□□ -1.17
PKP4-201ENST00000389757 TIMM17AQ99595 171 aa7.72□□□□□ -1.17
PKP4-201ENST00000389757 NDUFA7O95182 113 aa7.72□□□□□ -1.17
PKP4-201ENST00000389757 CEND1Q8N111 149 aa7.72□□□□□ -1.17
PKP4-201ENST00000389757 RNF183Q96D59 192 aa7.72□□□□□ -1.17
PKP4-201ENST00000389757 A0A1W2PPR1 153 aa7.72□□□□□ -1.17
PKP4-201ENST00000389757 IGLV1-40P01703 118 aa7.72□□□□□ -1.17
PKP4-201ENST00000389757 SPAG11BQ08648 103 aa7.72□□□□□ -1.17
PKP4-201ENST00000389757 GAGE2BQ13066 116 aa7.72□□□□□ -1.17
PKP4-201ENST00000389757 Q6ZS46 218 aa7.72□□□□□ -1.17
PKP4-201ENST00000389757 SIVA1O15304 175 aa7.71□□□□□ -1.17
PKP4-201ENST00000389757 ZNF124Q15973 351 aa7.71□□□□□ -1.17
PKP4-201ENST00000389757 ANKRD11Q6UB99 2663 aaPredicted RBP7.71□□□□□ -1.17
PKP4-201ENST00000389757 CXCL5P42830 114 aa7.71□□□□□ -1.17
PKP4-201ENST00000389757 BBC3Q96PG8 261 aaPredicted RBP7.71□□□□□ -1.18
PKP4-201ENST00000389757 TOMM6Q96B49 74 aa7.71□□□□□ -1.18
PKP4-201ENST00000389757 CCL25O15444 150 aa7.71□□□□□ -1.18
PKP4-201ENST00000389757 SRCAPQ6ZRS2 3230 aa7.7□□□□□ -1.18
PKP4-201ENST00000389757 IFITM1P13164 125 aa7.7□□□□□ -1.18
PKP4-201ENST00000389757 C20orf203Q8NBC4 194 aa7.7□□□□□ -1.18
PKP4-201ENST00000389757 SORL1Q92673 2214 aa7.7□□□□□ -1.18
PKP4-201ENST00000389757 OCIAD2Q56VL3 154 aa7.7□□□□□ -1.18
PKP4-201ENST00000389757 C18orf65Q6ZTR6 163 aa7.7□□□□□ -1.18
PKP4-201ENST00000389757 MYO9AB2RTY4 2548 aa7.7□□□□□ -1.18
PKP4-201ENST00000389757 C14orf177Q52M58 125 aa7.69□□□□□ -1.18
PKP4-201ENST00000389757 BVES-AS1Q5T3Y7 98 aa7.69□□□□□ -1.18
PKP4-201ENST00000389757 CHD8Q9HCK8 2581 aa7.69□□□□□ -1.18
PKP4-201ENST00000389757 TRAV12-1A0A0B4J245 112 aa7.69□□□□□ -1.18
PKP4-201ENST00000389757 DSCR8Q96T75 97 aa7.69□□□□□ -1.18
PKP4-201ENST00000389757 SND1-IT1Q9HBX3 110 aa7.69□□□□□ -1.18
PKP4-201ENST00000389757 BAALCQ8WXS3 180 aa7.69□□□□□ -1.18
PKP4-201ENST00000389757 SIGMAR1Q99720 223 aa7.69□□□□□ -1.18
PKP4-201ENST00000389757 COX11Q9Y6N1 276 aa7.69□□□□□ -1.18
PKP4-201ENST00000389757 C9orf118A6NHY6 69 aa7.69□□□□□ -1.18
PKP4-201ENST00000389757 UBE2V1Q13404 147 aa7.69□□□□□ -1.18
PKP4-201ENST00000389757 GTSF1LQ9H1H1 148 aa7.69□□□□□ -1.18
PKP4-201ENST00000389757 COA6Q5JTJ3 125 aaKnown RBP7.68□□□□□ -1.18
PKP4-201ENST00000389757 PCP2Q8IVA1 136 aa7.68□□□□□ -1.18
PKP4-201ENST00000389757 DLEU1O43261 78 aa7.68□□□□□ -1.18
PKP4-201ENST00000389757 RBMY1FQ15415 496 aaKnown RBP7.68□□□□□ -1.18
PKP4-201ENST00000389757 DEFB105AQ8NG35 78 aa7.68□□□□□ -1.18
PKP4-201ENST00000389757 GAGE12HA6NDE8 117 aa7.68□□□□□ -1.18
PKP4-201ENST00000389757 P0DMU3 169 aa7.67□□□□□ -1.18
PKP4-201ENST00000389757 FAM231AP0DMU4 169 aa7.67□□□□□ -1.18
PKP4-201ENST00000389757 FAM231CP0DMU5 169 aa7.67□□□□□ -1.18
PKP4-201ENST00000389757 MAJINQ3KP22 176 aa7.67□□□□□ -1.18
PKP4-201ENST00000389757 GDF5OSQ5U4N7 250 aa7.67□□□□□ -1.18
PKP4-201ENST00000389757 LINC00173Q6ZV60 143 aa7.67□□□□□ -1.18
PKP4-201ENST00000389757 LINC01545Q5VT33 79 aa7.67□□□□□ -1.18
PKP4-201ENST00000389757 JMJD1CQ15652 2540 aa7.67□□□□□ -1.18
PKP4-201ENST00000389757 TRAV10A0A0B4J240 114 aa7.67□□□□□ -1.18
PKP4-201ENST00000389757 IGLC6P0CF74 106 aa7.67□□□□□ -1.18
PKP4-201ENST00000389757 CFC1BP0CG36 223 aa7.67□□□□□ -1.18
PKP4-201ENST00000389757 CFC1P0CG37 223 aa7.67□□□□□ -1.18
PKP4-201ENST00000389757 LINC00322Q6ZN03 302 aaPredicted RBP7.67□□□□□ -1.18
PKP4-201ENST00000389757 ZFAND2AQ8N6M9 145 aa7.67□□□□□ -1.18
PKP4-201ENST00000389757 C15orf53Q8NAA6 179 aa7.67□□□□□ -1.18
PKP4-201ENST00000389757 UBL5Q9BZL1 73 aa7.67□□□□□ -1.18
PKP4-201ENST00000389757 WDR87Q6ZQQ6 2873 aa7.67□□□□□ -1.18
PKP4-201ENST00000389757 SPTBN4Q9H254 2564 aa7.66□□□□□ -1.18
PKP4-201ENST00000389757 IGHV4-4A0A075B6R2 117 aa7.66□□□□□ -1.18
PKP4-201ENST00000389757 KIR2DL5BA0A0G2JN68 375 aa7.66□□□□□ -1.18
PKP4-201ENST00000389757 KIR2DL5BA0A0G2JPC4 375 aa7.66□□□□□ -1.18
PKP4-201ENST00000389757 IGLV2-8P01709 118 aa7.66□□□□□ -1.18
PKP4-201ENST00000389757 Q6ZVH6 145 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms