RNA–Protein interactions for RNA: ENST00000389645.7

CAPRIN1-202, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-202ENST00000389645 J3QLI3 93 aa9.08□□□□□ -0.96
CAPRIN1-202ENST00000389645 GAGE13Q4V321 117 aa9.08□□□□□ -0.96
CAPRIN1-202ENST00000389645 RASL10AQ92737 203 aa9.08□□□□□ -0.96
CAPRIN1-202ENST00000389645 SRSF2Q01130 221 aaKnown RBP9.08□□□□□ -0.96
CAPRIN1-202ENST00000389645 TMEM170BQ5T4T1 132 aa9.08□□□□□ -0.96
CAPRIN1-202ENST00000389645 ERG28Q9UKR5 140 aa9.08□□□□□ -0.96
CAPRIN1-202ENST00000389645 HOXA3O43365 443 aaPredicted RBP9.07□□□□□ -0.96
CAPRIN1-202ENST00000389645 HHLA3Q9XRX5 114 aa9.07□□□□□ -0.96
CAPRIN1-202ENST00000389645 MAPKAPK5-AS1Q8N8E1 139 aa9.07□□□□□ -0.96
CAPRIN1-202ENST00000389645 H7C1H1 209 aa9.07□□□□□ -0.96
CAPRIN1-202ENST00000389645 IGHV3-64A0A075B6Q5 118 aa9.06□□□□□ -0.96
CAPRIN1-202ENST00000389645 A0A087WX48 190 aa9.06□□□□□ -0.96
CAPRIN1-202ENST00000389645 DUSP14O95147 198 aaKnown RBP9.06□□□□□ -0.96
CAPRIN1-202ENST00000389645 RPL39P62891 51 aaKnown RBP9.06□□□□□ -0.96
CAPRIN1-202ENST00000389645 TP53TG1Q9Y2A0 90 aa9.06□□□□□ -0.96
CAPRIN1-202ENST00000389645 Q6ZUT4 128 aa9.06□□□□□ -0.96
CAPRIN1-202ENST00000389645 CDIP1Q9H305 208 aa9.06□□□□□ -0.96
CAPRIN1-202ENST00000389645 PPDPFQ9H3Y8 114 aa9.06□□□□□ -0.96
CAPRIN1-202ENST00000389645 F8VRH5 84 aa9.06□□□□□ -0.96
CAPRIN1-202ENST00000389645 MDFICQ9P1T7 246 aa9.06□□□□□ -0.96
CAPRIN1-202ENST00000389645 KNCNA6PVL3 124 aa9.05□□□□□ -0.96
CAPRIN1-202ENST00000389645 M0QXV9 152 aa9.05□□□□□ -0.96
CAPRIN1-202ENST00000389645 LENEPQ9Y5L5 61 aa9.05□□□□□ -0.96
CAPRIN1-202ENST00000389645 MUC4Q99102 2169 aa9.05□□□□□ -0.96
CAPRIN1-202ENST00000389645 ZNF815PA8K554 130 aa9.05□□□□□ -0.96
CAPRIN1-202ENST00000389645 RNASE3P12724 160 aaKnown RBP9.05□□□□□ -0.96
CAPRIN1-202ENST00000389645 KLHL30-AS1Q8NEE0 82 aa9.05□□□□□ -0.96
CAPRIN1-202ENST00000389645 IGLV2-18A0A075B6J9 118 aa9.04□□□□□ -0.96
CAPRIN1-202ENST00000389645 IGHV3OR16-12A0A075B7B8 117 aa9.04□□□□□ -0.96
CAPRIN1-202ENST00000389645 FSHBP01225 129 aa9.04□□□□□ -0.96
CAPRIN1-202ENST00000389645 PLNP26678 52 aa9.04□□□□□ -0.96
CAPRIN1-202ENST00000389645 TM2D2Q9BX73 214 aa9.04□□□□□ -0.96
CAPRIN1-202ENST00000389645 SDHAF1A6NFY7 115 aa9.04□□□□□ -0.96
CAPRIN1-202ENST00000389645 PRM2P04554 102 aa9.04□□□□□ -0.96
CAPRIN1-202ENST00000389645 NFE4Q86UQ8 179 aa9.04□□□□□ -0.96
CAPRIN1-202ENST00000389645 CRIP2P52943 208 aaPredicted RBP9.04□□□□□ -0.96
CAPRIN1-202ENST00000389645 Q6YL49 198 aa9.04□□□□□ -0.96
CAPRIN1-202ENST00000389645 FLNBO75369 2602 aaKnown RBP9.03□□□□□ -0.96
CAPRIN1-202ENST00000389645 KLK9Q2XQG4 91 aa9.03□□□□□ -0.96
CAPRIN1-202ENST00000389645 ZNF876PQ49A33 203 aa9.03□□□□□ -0.96
CAPRIN1-202ENST00000389645 FOXI2Q6ZQN5 318 aa9.03□□□□□ -0.96
CAPRIN1-202ENST00000389645 PRADC1Q9BSG0 188 aa9.03□□□□□ -0.96
CAPRIN1-202ENST00000389645 YAE1D1Q9NRH1 226 aa9.03□□□□□ -0.96
CAPRIN1-202ENST00000389645 SUMO4Q6EEV6 95 aa9.03□□□□□ -0.96
CAPRIN1-202ENST00000389645 VPREB3Q9UKI3 123 aa9.03□□□□□ -0.96
CAPRIN1-202ENST00000389645 NIPBLQ6KC79 2804 aaeCLIP9.03□□□□□ -0.96
CAPRIN1-202ENST00000389645 IGHV4OR15-8A0A075B7B6 117 aa9.03□□□□□ -0.96
CAPRIN1-202ENST00000389645 A0A087WW49 117 aa9.03□□□□□ -0.96
CAPRIN1-202ENST00000389645 A0A1W2PRX2 142 aa9.03□□□□□ -0.96
CAPRIN1-202ENST00000389645 F8W1H4 67 aa9.02□□□□□ -0.97
CAPRIN1-202ENST00000389645 SOCS3O14543 225 aa9.02□□□□□ -0.97
CAPRIN1-202ENST00000389645 IGLV1-40P01703 118 aa9.02□□□□□ -0.97
CAPRIN1-202ENST00000389645 Q8N1Y9 231 aa9.02□□□□□ -0.97
CAPRIN1-202ENST00000389645 OPRPNQ99935 248 aaPredicted RBP9.02□□□□□ -0.97
CAPRIN1-202ENST00000389645 FAM110AQ9BQ89 295 aa9.02□□□□□ -0.97
CAPRIN1-202ENST00000389645 IGLL5B9A064 214 aa9.02□□□□□ -0.97
CAPRIN1-202ENST00000389645 SCGB1C2P0DMR2 95 aa9.02□□□□□ -0.97
CAPRIN1-202ENST00000389645 HLA-DRB4P13762 266 aa9.02□□□□□ -0.97
CAPRIN1-202ENST00000389645 DEFB131AP59861 70 aa9.02□□□□□ -0.97
CAPRIN1-202ENST00000389645 MRPL23Q16540 153 aaKnown RBP9.02□□□□□ -0.97
CAPRIN1-202ENST00000389645 CEND1Q8N111 149 aa9.02□□□□□ -0.97
CAPRIN1-202ENST00000389645 TEX29Q8N6K0 151 aa9.02□□□□□ -0.97
CAPRIN1-202ENST00000389645 HLA-DRB4X5D2U9 266 aa9.02□□□□□ -0.97
CAPRIN1-202ENST00000389645 OTOGQ6ZRI0 2925 aa9.02□□□□□ -0.97
CAPRIN1-202ENST00000389645 H3BUA1 57 aa9.01□□□□□ -0.97
CAPRIN1-202ENST00000389645 HOXD3P31249 432 aaPredicted RBP9.01□□□□□ -0.97
CAPRIN1-202ENST00000389645 FOXI1Q12951 378 aa9.01□□□□□ -0.97
CAPRIN1-202ENST00000389645 BAALCQ8WXS3 180 aa9.01□□□□□ -0.97
CAPRIN1-202ENST00000389645 SLURP1P55000 103 aa9.01□□□□□ -0.97
CAPRIN1-202ENST00000389645 PSMB2P49721 201 aa9.01□□□□□ -0.97
CAPRIN1-202ENST00000389645 CFHR3Q02985 330 aa9.01□□□□□ -0.97
CAPRIN1-202ENST00000389645 ZFAND6Q6FIF0 208 aa9.01□□□□□ -0.97
CAPRIN1-202ENST00000389645 C18orf65Q6ZTR6 163 aa9□□□□□ -0.97
CAPRIN1-202ENST00000389645 DYNLRB2Q8TF09 96 aa9□□□□□ -0.97
CAPRIN1-202ENST00000389645 VCYO14598 125 aa9□□□□□ -0.97
CAPRIN1-202ENST00000389645 PPP1R17O96001 155 aa9□□□□□ -0.97
CAPRIN1-202ENST00000389645 HERVK_113P61574 105 aa9□□□□□ -0.97
CAPRIN1-202ENST00000389645 DCANP1Q8TF63 244 aa9□□□□□ -0.97
CAPRIN1-202ENST00000389645 TOMM6Q96B49 74 aa9□□□□□ -0.97
CAPRIN1-202ENST00000389645 SMR3AQ99954 134 aa9□□□□□ -0.97
CAPRIN1-202ENST00000389645 ANK3Q12955 4377 aaKnown RBP9□□□□□ -0.97
CAPRIN1-202ENST00000389645 MYMXA0A1B0GTQ4 84 aa8.99□□□□□ -0.97
CAPRIN1-202ENST00000389645 RNASE13Q5GAN3 156 aaKnown RBP8.99□□□□□ -0.97
CAPRIN1-202ENST00000389645 IGHV4-4A0A075B6R2 117 aa8.99□□□□□ -0.97
CAPRIN1-202ENST00000389645 PSMB8P28062 276 aa8.99□□□□□ -0.97
CAPRIN1-202ENST00000389645 ZFP2Q6ZN57 461 aa8.99□□□□□ -0.97
CAPRIN1-202ENST00000389645 ZNF702PQ9H963 129 aa8.99□□□□□ -0.97
CAPRIN1-202ENST00000389645 TNFRSF18Q9Y5U5 241 aa8.99□□□□□ -0.97
CAPRIN1-202ENST00000389645 IGHV1OR15-1A0A075B7D0 117 aa8.99□□□□□ -0.97
CAPRIN1-202ENST00000389645 NHLRC4P0CG21 123 aaPredicted RBP8.99□□□□□ -0.97
CAPRIN1-202ENST00000389645 C11orf86A6NJI1 115 aa8.98□□□□□ -0.97
CAPRIN1-202ENST00000389645 NPC2P61916 151 aa8.98□□□□□ -0.97
CAPRIN1-202ENST00000389645 C12orf74Q32Q52 190 aa8.98□□□□□ -0.97
CAPRIN1-202ENST00000389645 ZMAT4Q9H898 229 aa8.98□□□□□ -0.97
CAPRIN1-202ENST00000389645 GAGE12JA6NER3 117 aa8.97□□□□□ -0.97
CAPRIN1-202ENST00000389645 GAGE7O76087 117 aa8.97□□□□□ -0.97
CAPRIN1-202ENST00000389645 GAGE12FP0CL80 117 aa8.97□□□□□ -0.97
CAPRIN1-202ENST00000389645 GAGE12GP0CL81 117 aa8.97□□□□□ -0.97
CAPRIN1-202ENST00000389645 GAGE12IP0CL82 117 aa8.97□□□□□ -0.97
CAPRIN1-202ENST00000389645 P0DMU3 169 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms