RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 MSMBP08118 114 aa9.97□□□□□ -0.81
TRAPPC9-201ENST00000389328 INAFM2P0DMQ5 153 aa9.97□□□□□ -0.81
TRAPPC9-201ENST00000389328 XGP55808 180 aa9.97□□□□□ -0.81
TRAPPC9-201ENST00000389328 C6orf226Q5I0X4 101 aa9.97□□□□□ -0.81
TRAPPC9-201ENST00000389328 CFAP126Q5VTH2 177 aa9.97□□□□□ -0.81
TRAPPC9-201ENST00000389328 TMEM86BQ8N661 226 aa9.97□□□□□ -0.81
TRAPPC9-201ENST00000389328 CFHR3Q02985 330 aa9.97□□□□□ -0.81
TRAPPC9-201ENST00000389328 DOPEY1Q5JWR5 2465 aa9.97□□□□□ -0.81
TRAPPC9-201ENST00000389328 TRBV10-2A0A0K0K1G8 114 aa9.96□□□□□ -0.81
TRAPPC9-201ENST00000389328 SLC25A29Q8N8R3 303 aa9.96□□□□□ -0.81
TRAPPC9-201ENST00000389328 NAV2Q8IVL1 2488 aa9.96□□□□□ -0.81
TRAPPC9-201ENST00000389328 ODF3BA8MYP8 253 aa9.96□□□□□ -0.81
TRAPPC9-201ENST00000389328 IGHG4P01861 327 aa9.96□□□□□ -0.81
TRAPPC9-201ENST00000389328 CFAP161Q6P656 301 aa9.96□□□□□ -0.81
TRAPPC9-201ENST00000389328 SPANXA1Q9NS26 97 aa9.96□□□□□ -0.82
TRAPPC9-201ENST00000389328 IGHV3-30-3P0DP02 117 aa9.95□□□□□ -0.82
TRAPPC9-201ENST00000389328 IGHV4-38-2P0DP08 117 aa9.95□□□□□ -0.82
TRAPPC9-201ENST00000389328 PRR9Q5T870 116 aa9.95□□□□□ -0.82
TRAPPC9-201ENST00000389328 Q8NA96 180 aa9.95□□□□□ -0.82
TRAPPC9-201ENST00000389328 XIRP2A4UGR9 3374 aa9.95□□□□□ -0.82
TRAPPC9-201ENST00000389328 CDH23Q9H251 3354 aa9.95□□□□□ -0.82
TRAPPC9-201ENST00000389328 BAALC-AS2P0C853 105 aa9.95□□□□□ -0.82
TRAPPC9-201ENST00000389328 FAM236AA0A1B0GUQ0 79 aa9.95□□□□□ -0.82
TRAPPC9-201ENST00000389328 FAM236BA0A1B0GV22 79 aa9.95□□□□□ -0.82
TRAPPC9-201ENST00000389328 ZFAND2AQ8N6M9 145 aa9.95□□□□□ -0.82
TRAPPC9-201ENST00000389328 C20orf203Q8NBC4 194 aa9.95□□□□□ -0.82
TRAPPC9-201ENST00000389328 HOXD3P31249 432 aaPredicted RBP9.94□□□□□ -0.82
TRAPPC9-201ENST00000389328 Q6ZS46 218 aa9.94□□□□□ -0.82
TRAPPC9-201ENST00000389328 DNAH14Q0VDD8 3507 aa9.94□□□□□ -0.82
TRAPPC9-201ENST00000389328 SIRPDQ9H106 197 aa9.94□□□□□ -0.82
TRAPPC9-201ENST00000389328 MED14OSP0DP75 135 aa9.94□□□□□ -0.82
TRAPPC9-201ENST00000389328 RPL35AP18077 110 aaKnown RBP9.94□□□□□ -0.82
TRAPPC9-201ENST00000389328 CNFNQ9BYD5 112 aa9.94□□□□□ -0.82
TRAPPC9-201ENST00000389328 PRUNE2Q8WUY3 3088 aa9.93□□□□□ -0.82
TRAPPC9-201ENST00000389328 NDUFV3P56181 108 aaKnown RBP9.93□□□□□ -0.82
TRAPPC9-201ENST00000389328 MALP21145 153 aa9.93□□□□□ -0.82
TRAPPC9-201ENST00000389328 USP9YO00507 2555 aaPredicted RBP9.93□□□□□ -0.82
TRAPPC9-201ENST00000389328 TINCRA0A1B0GVN0 87 aa9.92□□□□□ -0.82
TRAPPC9-201ENST00000389328 P0DMU3 169 aa9.92□□□□□ -0.82
TRAPPC9-201ENST00000389328 FAM231AP0DMU4 169 aa9.92□□□□□ -0.82
TRAPPC9-201ENST00000389328 FAM231CP0DMU5 169 aa9.92□□□□□ -0.82
TRAPPC9-201ENST00000389328 A0A0J9YXY3 114 aa9.92□□□□□ -0.82
TRAPPC9-201ENST00000389328 HERVK_113P63121 156 aa9.92□□□□□ -0.82
TRAPPC9-201ENST00000389328 USP9XQ93008 2570 aaPredicted RBP9.92□□□□□ -0.82
TRAPPC9-201ENST00000389328 IGHV4-61A0A0C4DH41 118 aa9.92□□□□□ -0.82
TRAPPC9-201ENST00000389328 IGHV4-59P01825 116 aa9.92□□□□□ -0.82
TRAPPC9-201ENST00000389328 DEFB136Q30KP8 78 aa9.92□□□□□ -0.82
TRAPPC9-201ENST00000389328 ZMAT4Q9H898 229 aa9.92□□□□□ -0.82
TRAPPC9-201ENST00000389328 LGALS9O00182 355 aa9.92□□□□□ -0.82
TRAPPC9-201ENST00000389328 HTN3P15516 51 aa9.91□□□□□ -0.82
TRAPPC9-201ENST00000389328 MRGPRG-AS1Q2M3A8 158 aa9.91□□□□□ -0.82
TRAPPC9-201ENST00000389328 S100A7L2Q5SY68 101 aa9.91□□□□□ -0.82
TRAPPC9-201ENST00000389328 IGHV3-33P01772 117 aa9.91□□□□□ -0.82
TRAPPC9-201ENST00000389328 H3BUA1 57 aa9.91□□□□□ -0.82
TRAPPC9-201ENST00000389328 SOCS3O14543 225 aa9.9□□□□□ -0.82
TRAPPC9-201ENST00000389328 TNFRSF13BO14836 293 aaPredicted RBP9.9□□□□□ -0.82
TRAPPC9-201ENST00000389328 NXPH4O95158 308 aa9.9□□□□□ -0.82
TRAPPC9-201ENST00000389328 IGHV3-30P01768 117 aa9.9□□□□□ -0.82
TRAPPC9-201ENST00000389328 IGHV3-30-5P0DP03 117 aa9.9□□□□□ -0.82
TRAPPC9-201ENST00000389328 U3KQE9 123 aa9.9□□□□□ -0.82
TRAPPC9-201ENST00000389328 ZNF22P17026 224 aaPredicted RBP9.9□□□□□ -0.82
TRAPPC9-201ENST00000389328 OVOL2Q9BRP0 275 aa9.9□□□□□ -0.82
TRAPPC9-201ENST00000389328 LAMTOR3Q9UHA4 124 aa9.9□□□□□ -0.82
TRAPPC9-201ENST00000389328 IGF2-ASQ6U949 168 aa9.9□□□□□ -0.83
TRAPPC9-201ENST00000389328 IGHV1-58A0A0C4DH39 117 aa9.89□□□□□ -0.83
TRAPPC9-201ENST00000389328 H3BT86 120 aa9.89□□□□□ -0.83
TRAPPC9-201ENST00000389328 DEFB130BP0DP73 79 aa9.89□□□□□ -0.83
TRAPPC9-201ENST00000389328 DEFB130AP0DP74 79 aa9.89□□□□□ -0.83
TRAPPC9-201ENST00000389328 ADORA2A-AS1P86434 159 aa9.89□□□□□ -0.83
TRAPPC9-201ENST00000389328 TRIOO75962 3097 aa9.89□□□□□ -0.83
TRAPPC9-201ENST00000389328 A0A0B4J2C4 111 aa9.89□□□□□ -0.83
TRAPPC9-201ENST00000389328 TRIAP1O43715 76 aa9.89□□□□□ -0.83
TRAPPC9-201ENST00000389328 NFE4Q86UQ8 179 aa9.89□□□□□ -0.83
TRAPPC9-201ENST00000389328 APRG1Q8IVJ8 170 aa9.89□□□□□ -0.83
TRAPPC9-201ENST00000389328 CITED1Q99966 193 aa9.89□□□□□ -0.83
TRAPPC9-201ENST00000389328 ANKRD11Q6UB99 2663 aaPredicted RBP9.88□□□□□ -0.83
TRAPPC9-201ENST00000389328 TRAV4A0A0B4J268 109 aa9.88□□□□□ -0.83
TRAPPC9-201ENST00000389328 RNASE3P12724 160 aaKnown RBP9.88□□□□□ -0.83
TRAPPC9-201ENST00000389328 TMEM243Q9BU79 118 aa9.88□□□□□ -0.83
TRAPPC9-201ENST00000389328 F8W735 103 aaPredicted RBP9.88□□□□□ -0.83
TRAPPC9-201ENST00000389328 DEFB112Q30KQ8 113 aa9.88□□□□□ -0.83
TRAPPC9-201ENST00000389328 TRAV13-2A0A0B4J235 113 aa9.87□□□□□ -0.83
TRAPPC9-201ENST00000389328 EBI3Q14213 229 aa9.87□□□□□ -0.83
TRAPPC9-201ENST00000389328 SPTBN4Q9H254 2564 aa9.87□□□□□ -0.83
TRAPPC9-201ENST00000389328 HIVEP2P31629 2446 aa9.87□□□□□ -0.83
TRAPPC9-201ENST00000389328 JMJD1CQ15652 2540 aa9.87□□□□□ -0.83
TRAPPC9-201ENST00000389328 TMEM223A0PJW6 202 aa9.87□□□□□ -0.83
TRAPPC9-201ENST00000389328 CLPSL1A2RUU4 121 aa9.87□□□□□ -0.83
TRAPPC9-201ENST00000389328 A8MZ25 164 aa9.87□□□□□ -0.83
TRAPPC9-201ENST00000389328 COL4A2P08572 1712 aa9.87□□□□□ -0.83
TRAPPC9-201ENST00000389328 IGKV3D-7A0A0C4DH55 119 aa9.86□□□□□ -0.83
TRAPPC9-201ENST00000389328 HERV-K104P63124 156 aa9.86□□□□□ -0.83
TRAPPC9-201ENST00000389328 A0A0J9YX75 114 aa9.86□□□□□ -0.83
TRAPPC9-201ENST00000389328 PF4P02776 101 aa9.86□□□□□ -0.83
TRAPPC9-201ENST00000389328 ACYP1P07311 99 aa9.86□□□□□ -0.83
TRAPPC9-201ENST00000389328 ADAMTS20P59510 1910 aa9.86□□□□□ -0.83
TRAPPC9-201ENST00000389328 IGLV4-3A0A075B6K6 122 aa9.86□□□□□ -0.83
TRAPPC9-201ENST00000389328 IGHG2P01859 326 aa9.86□□□□□ -0.83
TRAPPC9-201ENST00000389328 ZFYVE26Q68DK2 2539 aa9.86□□□□□ -0.83
TRAPPC9-201ENST00000389328 LINC01619G3V211 115 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms