RNA–Protein interactions for RNA: ENST00000389048.7

ALK-201, Transcript of ALK receptor tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALK, Length 6,220 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-201ENST00000389048 TMEM256-PLSCR3K7ERE1 68 aa11.87□□□□□ -0.51
ALK-201ENST00000389048 ODF1Q14990 250 aa11.86□□□□□ -0.51
ALK-201ENST00000389048 FAM167A-AS1Q96KT0 104 aa11.86□□□□□ -0.51
ALK-201ENST00000389048 B9D2Q9BPU9 175 aa11.86□□□□□ -0.51
ALK-201ENST00000389048 IGHV1-58A0A0C4DH39 117 aa11.85□□□□□ -0.51
ALK-201ENST00000389048 ENHOQ6UWT2 76 aa11.85□□□□□ -0.51
ALK-201ENST00000389048 C10orf105Q8TEF2 133 aa11.85□□□□□ -0.51
ALK-201ENST00000389048 LENEPQ9Y5L5 61 aa11.85□□□□□ -0.51
ALK-201ENST00000389048 JMJD7-PLA2G4BH0Y9G9 81 aa11.85□□□□□ -0.51
ALK-201ENST00000389048 NDUFA11Q86Y39 141 aa11.85□□□□□ -0.51
ALK-201ENST00000389048 ZSWIM8A7E2V4 1837 aa11.84□□□□□ -0.51
ALK-201ENST00000389048 GPHB5Q86YW7 130 aa11.84□□□□□ -0.51
ALK-201ENST00000389048 BPY2O14599 106 aa11.84□□□□□ -0.51
ALK-201ENST00000389048 SIP14410 1827 aa11.84□□□□□ -0.51
ALK-201ENST00000389048 IGLC6P0CF74 106 aa11.84□□□□□ -0.51
ALK-201ENST00000389048 IGHV4-30-4P0DP06 118 aa11.84□□□□□ -0.51
ALK-201ENST00000389048 IGHV4-31P0DP07 118 aa11.84□□□□□ -0.51
ALK-201ENST00000389048 FAM19A1Q7Z5A9 133 aa11.83□□□□□ -0.52
ALK-201ENST00000389048 C3orf22Q8N5N4 141 aa11.83□□□□□ -0.52
ALK-201ENST00000389048 COA6Q5JTJ3 125 aaKnown RBP11.83□□□□□ -0.52
ALK-201ENST00000389048 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.82□□□□□ -0.52
ALK-201ENST00000389048 IGKV1D-37A0A075B6S9 117 aa11.82□□□□□ -0.52
ALK-201ENST00000389048 FAM19A5Q7Z5A7 132 aaPredicted RBP11.82□□□□□ -0.52
ALK-201ENST00000389048 PRR4Q16378 134 aa11.82□□□□□ -0.52
ALK-201ENST00000389048 PLXNA4Q9HCM2 1894 aa11.82□□□□□ -0.52
ALK-201ENST00000389048 Q8N7P7 452 aa11.82□□□□□ -0.52
ALK-201ENST00000389048 ZNF80P51504 273 aaPredicted RBP11.81□□□□□ -0.52
ALK-201ENST00000389048 PKDREJQ9NTG1 2253 aa11.81□□□□□ -0.52
ALK-201ENST00000389048 C4orf3Q8WVX3 66 aa11.81□□□□□ -0.52
ALK-201ENST00000389048 WNK2Q9Y3S1 2297 aa11.81□□□□□ -0.52
ALK-201ENST00000389048 A0A087WZ39 114 aa11.81□□□□□ -0.52
ALK-201ENST00000389048 TRBV6-1A0A0K0K1D8 114 aa11.81□□□□□ -0.52
ALK-201ENST00000389048 Q6ZTI0 123 aa11.81□□□□□ -0.52
ALK-201ENST00000389048 SNURFQ9Y675 71 aa11.81□□□□□ -0.52
ALK-201ENST00000389048 THSD7BQ9C0I4 1608 aa11.81□□□□□ -0.52
ALK-201ENST00000389048 LINC01548A6NM66 108 aa11.8□□□□□ -0.52
ALK-201ENST00000389048 IGLV2-14P01704 120 aa11.8□□□□□ -0.52
ALK-201ENST00000389048 PLA2G2CQ5R387 149 aa11.8□□□□□ -0.52
ALK-201ENST00000389048 PIK3CD-AS1Q5SR53 167 aa11.8□□□□□ -0.52
ALK-201ENST00000389048 FAM236DA0A1B0GTK5 79 aa11.8□□□□□ -0.52
ALK-201ENST00000389048 FAM236CP0DP71 79 aa11.8□□□□□ -0.52
ALK-201ENST00000389048 EP300Q09472 2414 aaPredicted RBP11.8□□□□□ -0.52
ALK-201ENST00000389048 C3orf84H3BNL1 204 aa11.8□□□□□ -0.52
ALK-201ENST00000389048 ADORA2A-AS1P86434 159 aa11.8□□□□□ -0.52
ALK-201ENST00000389048 ODF3L1Q8IXM7 274 aa11.8□□□□□ -0.52
ALK-201ENST00000389048 V9GYY9 64 aa11.8□□□□□ -0.52
ALK-201ENST00000389048 USP17L23D6RBM5 183 aa11.8□□□□□ -0.52
ALK-201ENST00000389048 MIAQ16674 131 aa11.8□□□□□ -0.52
ALK-201ENST00000389048 A0A0J9YXY3 114 aa11.79□□□□□ -0.52
ALK-201ENST00000389048 PPDPFQ9H3Y8 114 aa11.79□□□□□ -0.52
ALK-201ENST00000389048 WISP2O76076 250 aa11.79□□□□□ -0.52
ALK-201ENST00000389048 LINC00467Q9BRT7 94 aa11.79□□□□□ -0.52
ALK-201ENST00000389048 HIGD1BQ9P298 99 aa11.79□□□□□ -0.52
ALK-201ENST00000389048 SPTBN2O15020 2390 aa11.79□□□□□ -0.52
ALK-201ENST00000389048 MAP6D1Q9H9H5 199 aa11.79□□□□□ -0.52
ALK-201ENST00000389048 IGF1P05019 195 aa11.79□□□□□ -0.52
ALK-201ENST00000389048 LINC00322Q6ZN03 302 aaPredicted RBP11.79□□□□□ -0.52
ALK-201ENST00000389048 REG3AQ06141 175 aa11.78□□□□□ -0.52
ALK-201ENST00000389048 ROS1P08922 2347 aa11.78□□□□□ -0.52
ALK-201ENST00000389048 SMAD5-AS1Q9Y6J3 95 aa11.78□□□□□ -0.52
ALK-201ENST00000389048 PLXNA2O75051 1894 aa11.78□□□□□ -0.52
ALK-201ENST00000389048 SPINK6Q6UWN8 80 aa11.77□□□□□ -0.52
ALK-201ENST00000389048 LINC00526Q96FQ7 95 aa11.77□□□□□ -0.52
ALK-201ENST00000389048 XAGE1AQ9HD64 81 aa11.77□□□□□ -0.52
ALK-201ENST00000389048 DSCAML1Q8TD84 2053 aa11.77□□□□□ -0.52
ALK-201ENST00000389048 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.77□□□□□ -0.53
ALK-201ENST00000389048 ZFAND2AQ8N6M9 145 aa11.77□□□□□ -0.53
ALK-201ENST00000389048 CTRLP40313 264 aa11.77□□□□□ -0.53
ALK-201ENST00000389048 PROK1P58294 105 aa11.77□□□□□ -0.53
ALK-201ENST00000389048 A8MZ25 164 aa11.76□□□□□ -0.53
ALK-201ENST00000389048 KLK5Q9Y337 293 aaPredicted RBP11.76□□□□□ -0.53
ALK-201ENST00000389048 C11orf45Q8TAV5 145 aa11.76□□□□□ -0.53
ALK-201ENST00000389048 C1orf158Q8N1D5 194 aa11.76□□□□□ -0.53
ALK-201ENST00000389048 C20orf203Q8NBC4 194 aa11.76□□□□□ -0.53
ALK-201ENST00000389048 GDF5OSQ5U4N7 250 aa11.75□□□□□ -0.53
ALK-201ENST00000389048 CXCL5P42830 114 aa11.75□□□□□ -0.53
ALK-201ENST00000389048 LINC00643Q86TS7 51 aa11.75□□□□□ -0.53
ALK-201ENST00000389048 CACNA1BQ00975 2339 aa11.75□□□□□ -0.53
ALK-201ENST00000389048 H3BT86 120 aa11.75□□□□□ -0.53
ALK-201ENST00000389048 IGKV2-28A0A075B6P5 120 aa11.75□□□□□ -0.53
ALK-201ENST00000389048 IGKV2D-28P01615 120 aa11.75□□□□□ -0.53
ALK-201ENST00000389048 CRYGDP07320 174 aa11.75□□□□□ -0.53
ALK-201ENST00000389048 CHCHD10Q8WYQ3 142 aaPredicted RBP11.74□□□□□ -0.53
ALK-201ENST00000389048 FAM240AA0A1B0GVK7 77 aa11.74□□□□□ -0.53
ALK-201ENST00000389048 NDUFC2-KCTD14E9PQ53 114 aa11.74□□□□□ -0.53
ALK-201ENST00000389048 C20orf173Q96LM9 149 aa11.74□□□□□ -0.53
ALK-201ENST00000389048 DNAJC9-AS1A6NH13 148 aa11.74□□□□□ -0.53
ALK-201ENST00000389048 LINC00482Q8N8I6 264 aa11.74□□□□□ -0.53
ALK-201ENST00000389048 M0R2N4 97 aa11.73□□□□□ -0.53
ALK-201ENST00000389048 C22orf34Q6ZV56 151 aa11.73□□□□□ -0.53
ALK-201ENST00000389048 PRO0255Q9UI72 69 aa11.73□□□□□ -0.53
ALK-201ENST00000389048 SPANXB1Q9NS25 103 aaPredicted RBP11.73□□□□□ -0.53
ALK-201ENST00000389048 A0A0J9YX75 114 aa11.73□□□□□ -0.53
ALK-201ENST00000389048 H3BQ85 93 aa11.73□□□□□ -0.53
ALK-201ENST00000389048 POM121L12Q8N7R1 296 aa11.73□□□□□ -0.53
ALK-201ENST00000389048 NLRC5Q86WI3 1866 aa11.73□□□□□ -0.53
ALK-201ENST00000389048 RETNQ9HD89 108 aa11.73□□□□□ -0.53
ALK-201ENST00000389048 OBSL1O75147 1896 aa11.73□□□□□ -0.53
ALK-201ENST00000389048 IGLV2-18A0A075B6J9 118 aa11.72□□□□□ -0.53
ALK-201ENST00000389048 TRBV10-1A0A0K0K1A3 114 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms