RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 PKHD1L1Q86WI1 4243 aa-0.86□□□□□ -2.55
SNORD28-201ENST00000384706 DNAH3Q8TD57 4116 aa-0.86□□□□□ -2.55
SNORD28-201ENST00000384706 IBTKQ9P2D0 1353 aaPredicted RBP-0.86□□□□□ -2.55
SNORD28-201ENST00000384706 DOCK1Q14185 1865 aa-0.86□□□□□ -2.55
SNORD28-201ENST00000384706 MUC17Q685J3 4493 aa-0.87□□□□□ -2.55
SNORD28-201ENST00000384706 NIPBLQ6KC79 2804 aaeCLIP-0.87□□□□□ -2.554e-42■■■■■ 55.6
SNORD28-201ENST00000384706 LAMA3Q16787 3333 aa-0.87□□□□□ -2.55
SNORD28-201ENST00000384706 CUBNO60494 3623 aa-0.87□□□□□ -2.55
SNORD28-201ENST00000384706 TRAV2A0A0B4J234 112 aa-0.87□□□□□ -2.55
SNORD28-201ENST00000384706 H3BMG7 143 aa-0.87□□□□□ -2.55
SNORD28-201ENST00000384706 PGRMC1O00264 195 aaKnown RBP-0.87□□□□□ -2.55
SNORD28-201ENST00000384706 S100A11P31949 105 aa-0.87□□□□□ -2.55
SNORD28-201ENST00000384706 MRPS15P82914 257 aaKnown RBP-0.87□□□□□ -2.55
SNORD28-201ENST00000384706 SNX29P2Q8IUI4 249 aa-0.87□□□□□ -2.55
SNORD28-201ENST00000384706 CNPY4Q8N129 248 aa-0.87□□□□□ -2.55
SNORD28-201ENST00000384706 STX19Q8N4C7 294 aa-0.87□□□□□ -2.55
SNORD28-201ENST00000384706 PHB2Q99623 299 aa-0.87□□□□□ -2.55
SNORD28-201ENST00000384706 AGPAT4-IT1Q9H0P7 198 aa-0.87□□□□□ -2.55
SNORD28-201ENST00000384706 SLC35B3Q9H1N7 401 aa-0.87□□□□□ -2.55
SNORD28-201ENST00000384706 UFC1Q9Y3C8 167 aa-0.87□□□□□ -2.55
SNORD28-201ENST00000384706 FER1L6Q2WGJ9 1857 aa-0.87□□□□□ -2.55
SNORD28-201ENST00000384706 BIRC6Q9NR09 4857 aa-0.87□□□□□ -2.55
SNORD28-201ENST00000384706 KDM5CP41229 1560 aa-0.87□□□□□ -2.55
SNORD28-201ENST00000384706 LAMA1P25391 3075 aa-0.87□□□□□ -2.55
SNORD28-201ENST00000384706 H0YJX3 145 aa-0.88□□□□□ -2.55
SNORD28-201ENST00000384706 COTL1Q14019 142 aa-0.88□□□□□ -2.55
SNORD28-201ENST00000384706 HSD17B12Q53GQ0 312 aa-0.88□□□□□ -2.55
SNORD28-201ENST00000384706 TMEM91Q6ZNR0 172 aa-0.88□□□□□ -2.55
SNORD28-201ENST00000384706 DYDC1Q8WWB3 177 aa-0.88□□□□□ -2.55
SNORD28-201ENST00000384706 PPP1R14BQ96C90 147 aa-0.88□□□□□ -2.55
SNORD28-201ENST00000384706 METTL1Q9UBP6 276 aaKnown RBP-0.88□□□□□ -2.55
SNORD28-201ENST00000384706 ARL2BPQ9Y2Y0 163 aa-0.88□□□□□ -2.55
SNORD28-201ENST00000384706 NOP16Q9Y3C1 178 aaKnown RBP-0.88□□□□□ -2.55
SNORD28-201ENST00000384706 MYH3P11055 1940 aa-0.88□□□□□ -2.55
SNORD28-201ENST00000384706 USP9XQ93008 2570 aaPredicted RBP-0.89□□□□□ -2.55
SNORD28-201ENST00000384706 CAMSAP1Q5T5Y3 1602 aa-0.89□□□□□ -2.55
SNORD28-201ENST00000384706 LRRC37A2A6NM11 1700 aa-0.89□□□□□ -2.55
SNORD28-201ENST00000384706 PRRC2CQ9Y520 2896 aaKnown RBP-0.89□□□□□ -2.55
SNORD28-201ENST00000384706 AKAP13Q12802 2813 aa-0.89□□□□□ -2.55
SNORD28-201ENST00000384706 TRBV7-6A0A0J9YX20 115 aa-0.89□□□□□ -2.55
SNORD28-201ENST00000384706 CLPSL1A2RUU4 121 aa-0.89□□□□□ -2.55
SNORD28-201ENST00000384706 CCDC179H3BU77 68 aa-0.89□□□□□ -2.55
SNORD28-201ENST00000384706 UQCRQO14949 82 aa-0.89□□□□□ -2.55
SNORD28-201ENST00000384706 NCR2O95944 276 aa-0.89□□□□□ -2.55
SNORD28-201ENST00000384706 MT1AP04731 61 aa-0.89□□□□□ -2.55
SNORD28-201ENST00000384706 SLC25A5P05141 298 aaKnown RBP-0.89□□□□□ -2.55
SNORD28-201ENST00000384706 HIST1H1BP16401 226 aaKnown RBP-0.89□□□□□ -2.55
SNORD28-201ENST00000384706 CCL7P80098 99 aa-0.89□□□□□ -2.55
SNORD28-201ENST00000384706 DEFB123Q8N688 67 aa-0.89□□□□□ -2.55
SNORD28-201ENST00000384706 OR13C6PQ8NH95 151 aa-0.89□□□□□ -2.55
SNORD28-201ENST00000384706 C10orf82Q8WW14 230 aa-0.89□□□□□ -2.55
SNORD28-201ENST00000384706 MAFIPQ8WZ33 124 aa-0.89□□□□□ -2.55
SNORD28-201ENST00000384706 PRAP1Q96NZ9 151 aa-0.89□□□□□ -2.55
SNORD28-201ENST00000384706 GINS3Q9BRX5 216 aa-0.89□□□□□ -2.55
SNORD28-201ENST00000384706 CBLN4Q9NTU7 201 aa-0.89□□□□□ -2.55
SNORD28-201ENST00000384706 LAMTOR2Q9Y2Q5 125 aa-0.89□□□□□ -2.55
SNORD28-201ENST00000384706 GAPVD1Q14C86 1478 aa-0.89□□□□□ -2.55
SNORD28-201ENST00000384706 NSD3Q9BZ95 1437 aa-0.89□□□□□ -2.55
SNORD28-201ENST00000384706 AKAP9Q99996 3911 aa-0.9□□□□□ -2.55
SNORD28-201ENST00000384706 VPS13DQ5THJ4 4388 aa-0.9□□□□□ -2.55
SNORD28-201ENST00000384706 MUC22E2RYF6 1773 aaPredicted RBP-0.9□□□□□ -2.55
SNORD28-201ENST00000384706 A2MP01023 1474 aa-0.9□□□□□ -2.55
SNORD28-201ENST00000384706 MED23Q9ULK4 1368 aa-0.9□□□□□ -2.55
SNORD28-201ENST00000384706 BORCS7-ASMTA0A0B4J1R7 106 aa-0.9□□□□□ -2.55
SNORD28-201ENST00000384706 SYS1-DBNDD2H3BUS1 97 aa-0.9□□□□□ -2.55
SNORD28-201ENST00000384706 J3QLW9 94 aa-0.9□□□□□ -2.55
SNORD28-201ENST00000384706 TCRAP04437 139 aa-0.9□□□□□ -2.55
SNORD28-201ENST00000384706 UBE2D1P51668 147 aa-0.9□□□□□ -2.55
SNORD28-201ENST00000384706 C9orf116Q5BN46 136 aaPredicted RBP-0.9□□□□□ -2.55
SNORD28-201ENST00000384706 Q6JHZ5 121 aa-0.9□□□□□ -2.55
SNORD28-201ENST00000384706 HRCT1Q6UXD1 115 aa-0.9□□□□□ -2.55
SNORD28-201ENST00000384706 FAM24BQ8N5W8 94 aa-0.9□□□□□ -2.55
SNORD28-201ENST00000384706 SMIM4Q8WVI0 70 aa-0.9□□□□□ -2.55
SNORD28-201ENST00000384706 MYH8P13535 1937 aa-0.9□□□□□ -2.55
SNORD28-201ENST00000384706 PKD1L2Q7Z442 2459 aa-0.9□□□□□ -2.55
SNORD28-201ENST00000384706 LRRC37A3O60309 1634 aa-0.9□□□□□ -2.55
SNORD28-201ENST00000384706 RIF1Q5UIP0 2472 aaKnown RBP-0.91□□□□□ -2.55
SNORD28-201ENST00000384706 ZNF236Q9UL36 1845 aa-0.91□□□□□ -2.55
SNORD28-201ENST00000384706 ADCY9O60503 1353 aa-0.91□□□□□ -2.55
SNORD28-201ENST00000384706 MGAM2Q2M2H8 2515 aa-0.91□□□□□ -2.55
SNORD28-201ENST00000384706 RYR2Q92736 4967 aa-0.91□□□□□ -2.56
SNORD28-201ENST00000384706 CTXND1A0A1B0GTU2 59 aa-0.91□□□□□ -2.56
SNORD28-201ENST00000384706 M0QX08 132 aa-0.91□□□□□ -2.56
SNORD28-201ENST00000384706 PITX3O75364 302 aa-0.91□□□□□ -2.56
SNORD28-201ENST00000384706 IFNA1P01562 189 aa-0.91□□□□□ -2.56
SNORD28-201ENST00000384706 IFNGP01579 166 aa-0.91□□□□□ -2.56
SNORD28-201ENST00000384706 RPL22P35268 128 aaKnown RBP-0.91□□□□□ -2.56
SNORD28-201ENST00000384706 CDKN2CP42773 168 aa-0.91□□□□□ -2.56
SNORD28-201ENST00000384706 CCL18P55774 89 aa-0.91□□□□□ -2.56
SNORD28-201ENST00000384706 PSPHP78330 225 aa-0.91□□□□□ -2.56
SNORD28-201ENST00000384706 SMIM20Q8N5G0 67 aa-0.91□□□□□ -2.56
SNORD28-201ENST00000384706 ATP6V0E2Q8NHE4 81 aa-0.91□□□□□ -2.56
SNORD28-201ENST00000384706 CEP19Q96LK0 163 aa-0.91□□□□□ -2.56
SNORD28-201ENST00000384706 TRAPPC2LQ9UL33 140 aa-0.91□□□□□ -2.56
SNORD28-201ENST00000384706 APLNQ9ULZ1 77 aa-0.91□□□□□ -2.56
SNORD28-201ENST00000384706 MED31Q9Y3C7 131 aa-0.91□□□□□ -2.56
SNORD28-201ENST00000384706 ADGRB1O14514 1584 aa-0.91□□□□□ -2.56
SNORD28-201ENST00000384706 UHRF1BP1LA0JNW5 1464 aa-0.92□□□□□ -2.56
SNORD28-201ENST00000384706 PLB1Q6P1J6 1458 aa-0.92□□□□□ -2.56
SNORD28-201ENST00000384706 PRDM2Q13029 1718 aa-0.92□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms