RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 C10orf91Q5T1B1 145 aa4.52□□□□□ -1.69
RFX3-204ENST00000382004 SMAD5-AS1Q9Y6J3 95 aa4.52□□□□□ -1.69
RFX3-204ENST00000382004 IGHV1-58A0A0C4DH39 117 aa4.52□□□□□ -1.69
RFX3-204ENST00000382004 C2orf70A6NJV1 201 aa4.52□□□□□ -1.69
RFX3-204ENST00000382004 IGLC6P0CF74 106 aa4.52□□□□□ -1.69
RFX3-204ENST00000382004 PIK3CD-AS1Q5SR53 167 aa4.52□□□□□ -1.69
RFX3-204ENST00000382004 RITA1Q96K30 269 aa4.52□□□□□ -1.69
RFX3-204ENST00000382004 SORL1Q92673 2214 aa4.52□□□□□ -1.69
RFX3-204ENST00000382004 PRR4Q16378 134 aa4.52□□□□□ -1.69
RFX3-204ENST00000382004 CEMP1Q6PRD7 247 aaPredicted RBP4.52□□□□□ -1.69
RFX3-204ENST00000382004 NUPR1O60356 82 aa4.51□□□□□ -1.69
RFX3-204ENST00000382004 C17orf82Q86X59 251 aaPredicted RBP4.51□□□□□ -1.69
RFX3-204ENST00000382004 C9orf85Q96MD7 179 aa4.51□□□□□ -1.69
RFX3-204ENST00000382004 LINC00269Q8N2A0 174 aa4.51□□□□□ -1.69
RFX3-204ENST00000382004 PRAC2D3DTV9 90 aa4.51□□□□□ -1.69
RFX3-204ENST00000382004 TCL1BO95988 128 aa4.51□□□□□ -1.69
RFX3-204ENST00000382004 UBE2D1P51668 147 aa4.51□□□□□ -1.69
RFX3-204ENST00000382004 SNURFQ9Y675 71 aa4.51□□□□□ -1.69
RFX3-204ENST00000382004 IGHV7-81A0A0B4J1V7 117 aa4.51□□□□□ -1.69
RFX3-204ENST00000382004 GRNP28799 593 aaKnown RBP4.51□□□□□ -1.69
RFX3-204ENST00000382004 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.51□□□□□ -1.69
RFX3-204ENST00000382004 IGHV4-61A0A0C4DH41 118 aa4.51□□□□□ -1.69
RFX3-204ENST00000382004 COL24A1Q17RW2 1714 aa4.51□□□□□ -1.69
RFX3-204ENST00000382004 FHL1Q13642 323 aa4.51□□□□□ -1.69
RFX3-204ENST00000382004 FAM19A5Q7Z5A7 132 aaPredicted RBP4.51□□□□□ -1.69
RFX3-204ENST00000382004 C1orf158Q8N1D5 194 aa4.51□□□□□ -1.69
RFX3-204ENST00000382004 C11orf45Q8TAV5 145 aa4.51□□□□□ -1.69
RFX3-204ENST00000382004 RETNQ9HD89 108 aa4.51□□□□□ -1.69
RFX3-204ENST00000382004 C3orf84H3BNL1 204 aa4.51□□□□□ -1.69
RFX3-204ENST00000382004 WT1P19544 449 aaPredicted RBP4.51□□□□□ -1.69
RFX3-204ENST00000382004 ZFP36P26651 326 aaKnown RBP4.51□□□□□ -1.69
RFX3-204ENST00000382004 MDFICQ9P1T7 246 aa4.51□□□□□ -1.69
RFX3-204ENST00000382004 CTSZQ9UBR2 303 aa4.51□□□□□ -1.69
RFX3-204ENST00000382004 CRYGDP07320 174 aa4.5□□□□□ -1.69
RFX3-204ENST00000382004 P0DMU3 169 aa4.5□□□□□ -1.69
RFX3-204ENST00000382004 FAM231AP0DMU4 169 aa4.5□□□□□ -1.69
RFX3-204ENST00000382004 FAM231CP0DMU5 169 aa4.5□□□□□ -1.69
RFX3-204ENST00000382004 UFSP1Q6NVU6 142 aa4.5□□□□□ -1.69
RFX3-204ENST00000382004 HIGD1BQ9P298 99 aa4.5□□□□□ -1.69
RFX3-204ENST00000382004 KIAA1549Q9HCM3 1950 aa4.5□□□□□ -1.69
RFX3-204ENST00000382004 MIAQ16674 131 aa4.5□□□□□ -1.69
RFX3-204ENST00000382004 IGLV1-44P01699 117 aa4.5□□□□□ -1.69
RFX3-204ENST00000382004 I3L2K1 104 aa4.5□□□□□ -1.69
RFX3-204ENST00000382004 C10orf105Q8TEF2 133 aa4.5□□□□□ -1.69
RFX3-204ENST00000382004 NRGNQ92686 78 aa4.5□□□□□ -1.69
RFX3-204ENST00000382004 ZFAND3Q9H8U3 227 aa4.5□□□□□ -1.69
RFX3-204ENST00000382004 PRO0255Q9UI72 69 aa4.5□□□□□ -1.69
RFX3-204ENST00000382004 COL4A5P29400 1685 aa4.5□□□□□ -1.69
RFX3-204ENST00000382004 K7EIM0 57 aa4.5□□□□□ -1.69
RFX3-204ENST00000382004 UQCRQO14949 82 aa4.5□□□□□ -1.69
RFX3-204ENST00000382004 PPDPFQ9H3Y8 114 aa4.5□□□□□ -1.69
RFX3-204ENST00000382004 UBE2D3P61077 147 aa4.49□□□□□ -1.69
RFX3-204ENST00000382004 NDUFA11Q86Y39 141 aa4.49□□□□□ -1.69
RFX3-204ENST00000382004 KAAG1Q9UBP8 84 aa4.49□□□□□ -1.69
RFX3-204ENST00000382004 WFDC13Q8IUB5 93 aa4.49□□□□□ -1.69
RFX3-204ENST00000382004 PRRC2AP48634 2157 aaKnown RBP4.49□□□□□ -1.69
RFX3-204ENST00000382004 TRBV6-1A0A0K0K1D8 114 aa4.49□□□□□ -1.69
RFX3-204ENST00000382004 MED14OSP0DP75 135 aa4.49□□□□□ -1.69
RFX3-204ENST00000382004 SPRNQ5BIV9 151 aa4.49□□□□□ -1.69
RFX3-204ENST00000382004 C5orf56Q8N8D9 126 aa4.49□□□□□ -1.69
RFX3-204ENST00000382004 DCANP1Q8TF63 244 aa4.49□□□□□ -1.69
RFX3-204ENST00000382004 MT-ATP8P03928 68 aa4.49□□□□□ -1.69
RFX3-204ENST00000382004 REG3AQ06141 175 aa4.49□□□□□ -1.69
RFX3-204ENST00000382004 ODF1Q14990 250 aa4.49□□□□□ -1.69
RFX3-204ENST00000382004 IGLV11-55A0A075B6I3 123 aa4.49□□□□□ -1.69
RFX3-204ENST00000382004 Q8N9L7 120 aa4.49□□□□□ -1.69
RFX3-204ENST00000382004 IL17DQ8TAD2 202 aa4.49□□□□□ -1.69
RFX3-204ENST00000382004 C7orf33Q8WU49 177 aa4.49□□□□□ -1.69
RFX3-204ENST00000382004 COL5A3P25940 1745 aaPredicted RBP4.49□□□□□ -1.69
RFX3-204ENST00000382004 Q8NFD4 153 aa4.48□□□□□ -1.69
RFX3-204ENST00000382004 ZFAND2AQ8N6M9 145 aa4.48□□□□□ -1.69
RFX3-204ENST00000382004 COA6Q5JTJ3 125 aaKnown RBP4.48□□□□□ -1.69
RFX3-204ENST00000382004 SERP2Q8N6R1 65 aa4.48□□□□□ -1.69
RFX3-204ENST00000382004 C4orf3Q8WVX3 66 aa4.48□□□□□ -1.69
RFX3-204ENST00000382004 RIF1Q5UIP0 2472 aaKnown RBP4.48□□□□□ -1.69
RFX3-204ENST00000382004 IGFL3Q6UXB1 125 aa4.48□□□□□ -1.69
RFX3-204ENST00000382004 C1orf147Q96MC9 270 aaPredicted RBP4.48□□□□□ -1.69
RFX3-204ENST00000382004 PROK2Q9HC23 129 aa4.48□□□□□ -1.69
RFX3-204ENST00000382004 FAM215AQ9Y5M1 114 aa4.48□□□□□ -1.69
RFX3-204ENST00000382004 PRR14LQ5THK1 2151 aa4.48□□□□□ -1.69
RFX3-204ENST00000382004 FAM30AQ9NZY2 134 aa4.48□□□□□ -1.69
RFX3-204ENST00000382004 CCKP06307 115 aa4.48□□□□□ -1.69
RFX3-204ENST00000382004 VWA8A3KMH1 1905 aa4.48□□□□□ -1.69
RFX3-204ENST00000382004 ARHGAP32A7KAX9 2087 aa4.48□□□□□ -1.69
RFX3-204ENST00000382004 MYCNOSP40205 109 aa4.48□□□□□ -1.69
RFX3-204ENST00000382004 CHCHD10Q8WYQ3 142 aaPredicted RBP4.48□□□□□ -1.69
RFX3-204ENST00000382004 FNDC1Q4ZHG4 1894 aaPredicted RBP4.47□□□□□ -1.69
RFX3-204ENST00000382004 CREBBPQ92793 2442 aa4.47□□□□□ -1.69
RFX3-204ENST00000382004 A0A0J9YXY3 114 aa4.47□□□□□ -1.69
RFX3-204ENST00000382004 TIMM17BO60830 172 aa4.47□□□□□ -1.69
RFX3-204ENST00000382004 Q6ZVQ6 151 aa4.47□□□□□ -1.69
RFX3-204ENST00000382004 LY6G6EA0A0G2JKS1 128 aa4.47□□□□□ -1.69
RFX3-204ENST00000382004 XAGE1AQ9HD64 81 aa4.47□□□□□ -1.69
RFX3-204ENST00000382004 C1orf195Q5TG92 126 aa4.47□□□□□ -1.69
RFX3-204ENST00000382004 TRBV10-1A0A0K0K1A3 114 aa4.47□□□□□ -1.69
RFX3-204ENST00000382004 PATE2Q6UY27 113 aa4.47□□□□□ -1.69
RFX3-204ENST00000382004 X6R8D5 127 aa4.47□□□□□ -1.69
RFX3-204ENST00000382004 IGLV9-49A0A0B4J1Y8 123 aa4.47□□□□□ -1.69
RFX3-204ENST00000382004 TRBV27A0A0K0K1C4 114 aa4.47□□□□□ -1.69
RFX3-204ENST00000382004 COL4A1P02462 1669 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms