RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 PRADC1Q9BSG0 188 aa13.42□□□□□ -0.26
GTF3A-201ENST00000381140 FABP9Q0Z7S8 132 aa13.41□□□□□ -0.26
GTF3A-201ENST00000381140 Q6ZSN1 163 aa13.41□□□□□ -0.26
GTF3A-201ENST00000381140 FRZBQ92765 325 aa13.41□□□□□ -0.26
GTF3A-201ENST00000381140 TMEM191AQ9H0A3 160 aa13.41□□□□□ -0.26
GTF3A-201ENST00000381140 MSRB1Q9NZV6 116 aa13.41□□□□□ -0.26
GTF3A-201ENST00000381140 RHOHQ15669 191 aa13.4□□□□□ -0.26
GTF3A-201ENST00000381140 ZFP2Q6ZN57 461 aa13.4□□□□□ -0.26
GTF3A-201ENST00000381140 NEGR1Q7Z3B1 354 aa13.4□□□□□ -0.26
GTF3A-201ENST00000381140 TRBV6-4A0A1B0GX49 114 aa13.39□□□□□ -0.27
GTF3A-201ENST00000381140 RHODO00212 210 aa13.39□□□□□ -0.27
GTF3A-201ENST00000381140 APCSP02743 223 aa13.39□□□□□ -0.27
GTF3A-201ENST00000381140 TRGC1P0CF51 173 aa13.39□□□□□ -0.27
GTF3A-201ENST00000381140 DNAH6Q9C0G6 4158 aa13.39□□□□□ -0.27
GTF3A-201ENST00000381140 RAB5BP61020 215 aa13.38□□□□□ -0.27
GTF3A-201ENST00000381140 UFSP1Q6NVU6 142 aa13.38□□□□□ -0.27
GTF3A-201ENST00000381140 ZNRF2Q8NHG8 242 aa13.38□□□□□ -0.27
GTF3A-201ENST00000381140 CRYGDP07320 174 aa13.37□□□□□ -0.27
GTF3A-201ENST00000381140 LCE2DQ5TA82 110 aaPredicted RBP13.37□□□□□ -0.27
GTF3A-201ENST00000381140 FAM104BQ5XKR9 115 aa13.37□□□□□ -0.27
GTF3A-201ENST00000381140 SMIM15Q7Z3B0 74 aa13.37□□□□□ -0.27
GTF3A-201ENST00000381140 C14orf178Q8N769 122 aaPredicted RBP13.37□□□□□ -0.27
GTF3A-201ENST00000381140 AP1S3Q96PC3 154 aa13.37□□□□□ -0.27
GTF3A-201ENST00000381140 MRPS16Q9Y3D3 137 aaKnown RBP13.37□□□□□ -0.27
GTF3A-201ENST00000381140 KMT2AQ03164 3969 aa13.37□□□□□ -0.27
GTF3A-201ENST00000381140 LYPD5Q6UWN5 251 aa13.36□□□□□ -0.27
GTF3A-201ENST00000381140 GAGE12JA6NER3 117 aa13.35□□□□□ -0.27
GTF3A-201ENST00000381140 GAGE1Q13065 139 aa13.35□□□□□ -0.27
GTF3A-201ENST00000381140 GAGE4Q13068 117 aa13.35□□□□□ -0.27
GTF3A-201ENST00000381140 GAGE5Q13069 117 aa13.35□□□□□ -0.27
GTF3A-201ENST00000381140 ZNF56Q15929 161 aa13.35□□□□□ -0.27
GTF3A-201ENST00000381140 GAGE13Q4V321 117 aa13.35□□□□□ -0.27
GTF3A-201ENST00000381140 TMA7Q9Y2S6 64 aaKnown RBP13.35□□□□□ -0.27
GTF3A-201ENST00000381140 SMIM17P0DL12 118 aa13.34□□□□□ -0.27
GTF3A-201ENST00000381140 EVI2AP22794 236 aa13.34□□□□□ -0.27
GTF3A-201ENST00000381140 AMN1Q8IY45 258 aa13.34□□□□□ -0.27
GTF3A-201ENST00000381140 RNF185Q96GF1 192 aa13.34□□□□□ -0.27
GTF3A-201ENST00000381140 DPH3P1Q9H4G8 78 aa13.34□□□□□ -0.27
GTF3A-201ENST00000381140 Q9H8V8 135 aa13.34□□□□□ -0.27
GTF3A-201ENST00000381140 F5H697 171 aa13.33□□□□□ -0.27
GTF3A-201ENST00000381140 HIST1H2BKO60814 126 aa13.33□□□□□ -0.27
GTF3A-201ENST00000381140 HIST1H2BJP06899 126 aa13.33□□□□□ -0.27
GTF3A-201ENST00000381140 HIST1H2BOP23527 126 aa13.33□□□□□ -0.27
GTF3A-201ENST00000381140 HIST1H2BBP33778 126 aa13.33□□□□□ -0.27
GTF3A-201ENST00000381140 HIST1H2BDP58876 126 aa13.33□□□□□ -0.27
GTF3A-201ENST00000381140 HIST1H2BCP62807 126 aa13.33□□□□□ -0.27
GTF3A-201ENST00000381140 HIST2H2BEQ16778 126 aa13.33□□□□□ -0.27
GTF3A-201ENST00000381140 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.33□□□□□ -0.27
GTF3A-201ENST00000381140 SH2D6Q7Z4S9 175 aa13.33□□□□□ -0.27
GTF3A-201ENST00000381140 HIST1H2BHQ93079 126 aa13.33□□□□□ -0.27
GTF3A-201ENST00000381140 HIST1H2BNQ99877 126 aa13.33□□□□□ -0.27
GTF3A-201ENST00000381140 HIST1H2BMQ99879 126 aa13.33□□□□□ -0.27
GTF3A-201ENST00000381140 Q9UF83 564 aa13.33□□□□□ -0.27
GTF3A-201ENST00000381140 MGPP08493 103 aa13.32□□□□□ -0.28
GTF3A-201ENST00000381140 RAB4AP20338 218 aa13.32□□□□□ -0.28
GTF3A-201ENST00000381140 KIAA1644Q3SXP7 199 aa13.32□□□□□ -0.28
GTF3A-201ENST00000381140 UPK3BQ9BT76 320 aa13.32□□□□□ -0.28
GTF3A-201ENST00000381140 KIF25-AS1Q9Y6Z4 181 aa13.32□□□□□ -0.28
GTF3A-201ENST00000381140 NBDYA0A0U1RRE5 68 aa13.32□□□□□ -0.28
GTF3A-201ENST00000381140 MRPL51Q4U2R6 128 aaKnown RBP13.32□□□□□ -0.28
GTF3A-201ENST00000381140 ATP6V0E2Q8NHE4 81 aa13.31□□□□□ -0.28
GTF3A-201ENST00000381140 ALKBH7Q9BT30 221 aaPredicted RBP13.31□□□□□ -0.28
GTF3A-201ENST00000381140 PPBPP02775 128 aa13.3□□□□□ -0.28
GTF3A-201ENST00000381140 LINC00315P59091 139 aa13.3□□□□□ -0.28
GTF3A-201ENST00000381140 Q6ZR54 194 aa13.3□□□□□ -0.28
GTF3A-201ENST00000381140 SIVA1O15304 175 aa13.29□□□□□ -0.28
GTF3A-201ENST00000381140 ORMDL3Q8N138 153 aa13.29□□□□□ -0.28
GTF3A-201ENST00000381140 MRAP2Q96G30 205 aa13.29□□□□□ -0.28
GTF3A-201ENST00000381140 WFDC10BQ8IUB3 73 aa13.28□□□□□ -0.28
GTF3A-201ENST00000381140 D6R8Y8 96 aa13.27□□□□□ -0.29
GTF3A-201ENST00000381140 RPL36AP83881 106 aaKnown RBP13.27□□□□□ -0.29
GTF3A-201ENST00000381140 Q0VG73 95 aa13.27□□□□□ -0.29
GTF3A-201ENST00000381140 RPL36ALQ969Q0 106 aaKnown RBP13.27□□□□□ -0.29
GTF3A-201ENST00000381140 LAMTOR2Q9Y2Q5 125 aa13.27□□□□□ -0.29
GTF3A-201ENST00000381140 LINC00694P0DN24 101 aa13.26□□□□□ -0.29
GTF3A-201ENST00000381140 CKS2P33552 79 aa13.26□□□□□ -0.29
GTF3A-201ENST00000381140 TTC32Q5I0X7 151 aa13.26□□□□□ -0.29
GTF3A-201ENST00000381140 OR10J3Q5JRS4 329 aa13.26□□□□□ -0.29
GTF3A-201ENST00000381140 COA6Q5JTJ3 125 aaKnown RBP13.26□□□□□ -0.29
GTF3A-201ENST00000381140 GTSF1LQ9H1H1 148 aa13.26□□□□□ -0.29
GTF3A-201ENST00000381140 TRBV10-1A0A0K0K1A3 114 aa13.25□□□□□ -0.29
GTF3A-201ENST00000381140 C1orf134Q5TEV5 83 aa13.25□□□□□ -0.29
GTF3A-201ENST00000381140 C18orf32Q8TCD1 76 aa13.25□□□□□ -0.29
GTF3A-201ENST00000381140 PRELID3AQ96N28 172 aa13.25□□□□□ -0.29
GTF3A-201ENST00000381140 KRTAP1-5Q9BYS1 174 aa13.25□□□□□ -0.29
GTF3A-201ENST00000381140 S100A6P06703 90 aa13.24□□□□□ -0.29
GTF3A-201ENST00000381140 TIRAPP58753 221 aa13.24□□□□□ -0.29
GTF3A-201ENST00000381140 SUMO4Q6EEV6 95 aa13.24□□□□□ -0.29
GTF3A-201ENST00000381140 NEXN-AS1Q8NBZ9 246 aa13.24□□□□□ -0.29
GTF3A-201ENST00000381140 TRBV7-3A0A075B6L6 115 aa13.23□□□□□ -0.29
GTF3A-201ENST00000381140 TRAV8-6A0A0B4J262 113 aa13.23□□□□□ -0.29
GTF3A-201ENST00000381140 SMKR1H3BMG3 65 aa13.23□□□□□ -0.29
GTF3A-201ENST00000381140 NCR2O95944 276 aa13.23□□□□□ -0.29
GTF3A-201ENST00000381140 NDUFA6P56556 154 aa13.23□□□□□ -0.29
GTF3A-201ENST00000381140 LELP1Q5T871 98 aa13.23□□□□□ -0.29
GTF3A-201ENST00000381140 TRAV26-2A0A0B4J265 109 aa13.22□□□□□ -0.29
GTF3A-201ENST00000381140 IGHV3-38A0A0C4DH36 116 aa13.21□□□□□ -0.29
GTF3A-201ENST00000381140 RTL8CO15255 209 aa13.21□□□□□ -0.29
GTF3A-201ENST00000381140 GAS8-AS1O95177 125 aa13.21□□□□□ -0.29
GTF3A-201ENST00000381140 PPP1R17O96001 155 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms