RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 DEFB135Q30KP9 77 aa9.22□□□□□ -0.93
GABPB1-203ENST00000380877 COX11Q9Y6N1 276 aa9.22□□□□□ -0.93
GABPB1-203ENST00000380877 LY6G6DO95868 133 aa9.22□□□□□ -0.93
GABPB1-203ENST00000380877 SPART-AS1P0CW21 52 aa9.22□□□□□ -0.93
GABPB1-203ENST00000380877 PCP2Q8IVA1 136 aa9.22□□□□□ -0.93
GABPB1-203ENST00000380877 GATD1Q8NB37 220 aa9.22□□□□□ -0.93
GABPB1-203ENST00000380877 MRAPQ8TCY5 172 aa9.22□□□□□ -0.93
GABPB1-203ENST00000380877 GYPEP15421 78 aa9.22□□□□□ -0.93
GABPB1-203ENST00000380877 RPL39P62891 51 aaKnown RBP9.22□□□□□ -0.93
GABPB1-203ENST00000380877 HIST2H2BDQ6DRA6 164 aa9.22□□□□□ -0.93
GABPB1-203ENST00000380877 LINC01006Q8NI28 216 aa9.22□□□□□ -0.93
GABPB1-203ENST00000380877 SPINK8P0C7L1 97 aa9.21□□□□□ -0.93
GABPB1-203ENST00000380877 PFN2P35080 140 aa9.21□□□□□ -0.93
GABPB1-203ENST00000380877 CLPSL2Q6UWE3 100 aa9.21□□□□□ -0.93
GABPB1-203ENST00000380877 DEFB125Q8N687 156 aa9.21□□□□□ -0.93
GABPB1-203ENST00000380877 ATP5G1P05496 136 aa9.21□□□□□ -0.93
GABPB1-203ENST00000380877 YPEL4Q96NS1 127 aa9.21□□□□□ -0.93
GABPB1-203ENST00000380877 TP53TG3Q9ULZ0 132 aa9.21□□□□□ -0.93
GABPB1-203ENST00000380877 PSCAO43653 123 aa9.21□□□□□ -0.94
GABPB1-203ENST00000380877 ANKRD39Q53RE8 183 aa9.21□□□□□ -0.94
GABPB1-203ENST00000380877 TMEM263Q8WUH6 116 aaKnown RBP9.21□□□□□ -0.94
GABPB1-203ENST00000380877 UBE2V1Q13404 147 aa9.2□□□□□ -0.94
GABPB1-203ENST00000380877 A0A0J9YXV3 536 aa9.2□□□□□ -0.94
GABPB1-203ENST00000380877 ATP6V0E2Q8NHE4 81 aa9.2□□□□□ -0.94
GABPB1-203ENST00000380877 TRBV7-3A0A075B6L6 115 aa9.2□□□□□ -0.94
GABPB1-203ENST00000380877 DAZ2Q13117 558 aaKnown RBP9.2□□□□□ -0.94
GABPB1-203ENST00000380877 ATXN8Q156A1 80 aa9.2□□□□□ -0.94
GABPB1-203ENST00000380877 BVES-AS1Q5T3Y7 98 aa9.2□□□□□ -0.94
GABPB1-203ENST00000380877 DAZ4Q86SG3 579 aaKnown RBP9.2□□□□□ -0.94
GABPB1-203ENST00000380877 DAZ3Q9NR90 486 aaKnown RBP9.2□□□□□ -0.94
GABPB1-203ENST00000380877 DSCAML1Q8TD84 2053 aa9.2□□□□□ -0.94
GABPB1-203ENST00000380877 UNC80Q8N2C7 3258 aa9.2□□□□□ -0.94
GABPB1-203ENST00000380877 ZNF561-AS1K7EIQ3 104 aa9.19□□□□□ -0.94
GABPB1-203ENST00000380877 ESM1Q9NQ30 184 aa9.19□□□□□ -0.94
GABPB1-203ENST00000380877 CST9LQ9H4G1 147 aa9.19□□□□□ -0.94
GABPB1-203ENST00000380877 ZMAT4Q9H898 229 aa9.19□□□□□ -0.94
GABPB1-203ENST00000380877 GHRHP01286 108 aa9.19□□□□□ -0.94
GABPB1-203ENST00000380877 SIVA1O15304 175 aa9.19□□□□□ -0.94
GABPB1-203ENST00000380877 ZNF124Q15973 351 aa9.19□□□□□ -0.94
GABPB1-203ENST00000380877 C18orf65Q6ZTR6 163 aa9.19□□□□□ -0.94
GABPB1-203ENST00000380877 DEFB4AO15263 64 aa9.18□□□□□ -0.94
GABPB1-203ENST00000380877 HILS1P60008 231 aa9.18□□□□□ -0.94
GABPB1-203ENST00000380877 Q6ZQT7 251 aa9.18□□□□□ -0.94
GABPB1-203ENST00000380877 XCL1P47992 114 aa9.18□□□□□ -0.94
GABPB1-203ENST00000380877 C21orf62-AS1Q17RA5 79 aa9.18□□□□□ -0.94
GABPB1-203ENST00000380877 MRPL23Q16540 153 aaKnown RBP9.17□□□□□ -0.94
GABPB1-203ENST00000380877 TAL2Q16559 108 aa9.17□□□□□ -0.94
GABPB1-203ENST00000380877 TOMM6Q96B49 74 aa9.17□□□□□ -0.94
GABPB1-203ENST00000380877 TIMM17AQ99595 171 aa9.17□□□□□ -0.94
GABPB1-203ENST00000380877 HHLA3Q9XRX5 114 aa9.17□□□□□ -0.94
GABPB1-203ENST00000380877 TEX48A0A1B0GUV7 120 aa9.17□□□□□ -0.94
GABPB1-203ENST00000380877 SCGB1A1P11684 91 aa9.17□□□□□ -0.94
GABPB1-203ENST00000380877 NXPH4O95158 308 aa9.16□□□□□ -0.94
GABPB1-203ENST00000380877 CRIP2P52943 208 aaPredicted RBP9.16□□□□□ -0.94
GABPB1-203ENST00000380877 BPTFQ12830 3046 aa9.16□□□□□ -0.94
GABPB1-203ENST00000380877 F8W735 103 aaPredicted RBP9.16□□□□□ -0.94
GABPB1-203ENST00000380877 FGF6P10767 208 aa9.16□□□□□ -0.94
GABPB1-203ENST00000380877 CEND1Q8N111 149 aa9.16□□□□□ -0.94
GABPB1-203ENST00000380877 Q6ZTI0 123 aa9.16□□□□□ -0.94
GABPB1-203ENST00000380877 C5orf38Q86SI9 138 aa9.16□□□□□ -0.94
GABPB1-203ENST00000380877 C20orf203Q8NBC4 194 aa9.16□□□□□ -0.94
GABPB1-203ENST00000380877 BAALCQ8WXS3 180 aa9.16□□□□□ -0.94
GABPB1-203ENST00000380877 TRAV12-1A0A0B4J245 112 aa9.15□□□□□ -0.94
GABPB1-203ENST00000380877 C9orf118A6NHY6 69 aa9.15□□□□□ -0.94
GABPB1-203ENST00000380877 MRPS12O15235 138 aaKnown RBP9.15□□□□□ -0.94
GABPB1-203ENST00000380877 ODF1Q14990 250 aa9.15□□□□□ -0.94
GABPB1-203ENST00000380877 TRBV10-1A0A0K0K1A3 114 aa9.15□□□□□ -0.95
GABPB1-203ENST00000380877 MRGPRG-AS1Q2M3A8 158 aa9.15□□□□□ -0.95
GABPB1-203ENST00000380877 UBE2WQ96B02 151 aa9.15□□□□□ -0.95
GABPB1-203ENST00000380877 TTTY13Q9BZ97 58 aa9.15□□□□□ -0.95
GABPB1-203ENST00000380877 ICOSQ9Y6W8 199 aa9.15□□□□□ -0.95
GABPB1-203ENST00000380877 DCANP1Q8TF63 244 aa9.14□□□□□ -0.95
GABPB1-203ENST00000380877 Q9H8V8 135 aa9.14□□□□□ -0.95
GABPB1-203ENST00000380877 C11orf21Q9P2W6 132 aa9.14□□□□□ -0.95
GABPB1-203ENST00000380877 PRR9Q5T870 116 aa9.14□□□□□ -0.95
GABPB1-203ENST00000380877 C2orf82Q6UX34 121 aa9.14□□□□□ -0.95
GABPB1-203ENST00000380877 SMR3AQ99954 134 aa9.14□□□□□ -0.95
GABPB1-203ENST00000380877 PRO1854Q9UHT4 67 aa9.14□□□□□ -0.95
GABPB1-203ENST00000380877 ZNF292O60281 2723 aa9.14□□□□□ -0.95
GABPB1-203ENST00000380877 TRAV4A0A0B4J268 109 aa9.14□□□□□ -0.95
GABPB1-203ENST00000380877 K7ERJ3 54 aa9.14□□□□□ -0.95
GABPB1-203ENST00000380877 P0DMU3 169 aa9.14□□□□□ -0.95
GABPB1-203ENST00000380877 FAM231AP0DMU4 169 aa9.14□□□□□ -0.95
GABPB1-203ENST00000380877 FAM231CP0DMU5 169 aa9.14□□□□□ -0.95
GABPB1-203ENST00000380877 TTC32Q5I0X7 151 aa9.14□□□□□ -0.95
GABPB1-203ENST00000380877 TRIOO75962 3097 aa9.13□□□□□ -0.95
GABPB1-203ENST00000380877 TRAV8-3A0A0A6YYJ7 113 aa9.13□□□□□ -0.95
GABPB1-203ENST00000380877 AMTNQ6UX39 209 aa9.13□□□□□ -0.95
GABPB1-203ENST00000380877 C9JAW5 83 aa9.13□□□□□ -0.95
GABPB1-203ENST00000380877 SCRT2Q9NQ03 307 aa9.13□□□□□ -0.95
GABPB1-203ENST00000380877 SH2D6Q7Z4S9 175 aa9.13□□□□□ -0.95
GABPB1-203ENST00000380877 SLC25A29Q8N8R3 303 aa9.13□□□□□ -0.95
GABPB1-203ENST00000380877 C11orf86A6NJI1 115 aa9.12□□□□□ -0.95
GABPB1-203ENST00000380877 PRO0255Q9UI72 69 aa9.12□□□□□ -0.95
GABPB1-203ENST00000380877 HECTD1Q9ULT8 2610 aa9.12□□□□□ -0.95
GABPB1-203ENST00000380877 TSPAN13O95857 204 aa9.12□□□□□ -0.95
GABPB1-203ENST00000380877 SPATA12Q7Z6I5 190 aa9.12□□□□□ -0.95
GABPB1-203ENST00000380877 KLLNB2CW77 178 aa9.12□□□□□ -0.95
GABPB1-203ENST00000380877 IGLV10-54A0A075B6I4 117 aa9.11□□□□□ -0.95
GABPB1-203ENST00000380877 OPRPNQ99935 248 aaPredicted RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms