RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 Q8NA96 180 aa12.25□□□□□ -0.45
COL2A1-202ENST00000380518 OTOGLQ3ZCN5 2332 aa12.25□□□□□ -0.45
COL2A1-202ENST00000380518 A0A0B4J2C4 111 aa12.25□□□□□ -0.45
COL2A1-202ENST00000380518 H3BQ85 93 aa12.25□□□□□ -0.45
COL2A1-202ENST00000380518 A0A1B0GXF2 115 aa12.25□□□□□ -0.45
COL2A1-202ENST00000380518 TRBV12-3P01733 135 aa12.25□□□□□ -0.45
COL2A1-202ENST00000380518 SORL1Q92673 2214 aa12.25□□□□□ -0.45
COL2A1-202ENST00000380518 COL4A3Q01955 1670 aa12.24□□□□□ -0.45
COL2A1-202ENST00000380518 B5MCH6 92 aa12.24□□□□□ -0.45
COL2A1-202ENST00000380518 TMEM258P61165 79 aa12.24□□□□□ -0.45
COL2A1-202ENST00000380518 IGHV1-58A0A0C4DH39 117 aa12.24□□□□□ -0.45
COL2A1-202ENST00000380518 TRBV10-1A0A0K0K1A3 114 aa12.24□□□□□ -0.45
COL2A1-202ENST00000380518 SPATA12Q7Z6I5 190 aa12.24□□□□□ -0.45
COL2A1-202ENST00000380518 TIRAPP58753 221 aa12.24□□□□□ -0.45
COL2A1-202ENST00000380518 NDUFS5O43920 106 aa12.23□□□□□ -0.45
COL2A1-202ENST00000380518 BRWD1-AS2P59051 145 aa12.23□□□□□ -0.45
COL2A1-202ENST00000380518 TMEM263Q8WUH6 116 aaKnown RBP12.23□□□□□ -0.45
COL2A1-202ENST00000380518 CCDC140Q96MF4 163 aa12.22□□□□□ -0.45
COL2A1-202ENST00000380518 ODF3BA8MYP8 253 aa12.22□□□□□ -0.45
COL2A1-202ENST00000380518 JMJD7-PLA2G4BH0Y9G9 81 aa12.22□□□□□ -0.45
COL2A1-202ENST00000380518 H3BT86 120 aa12.22□□□□□ -0.45
COL2A1-202ENST00000380518 SPAG11BQ08648 103 aa12.22□□□□□ -0.45
COL2A1-202ENST00000380518 DEFB135Q30KP9 77 aa12.22□□□□□ -0.45
COL2A1-202ENST00000380518 TNRC6AQ8NDV7 1962 aaKnown RBP12.22□□□□□ -0.45
COL2A1-202ENST00000380518 CLPSL1A2RUU4 121 aa12.22□□□□□ -0.45
COL2A1-202ENST00000380518 TNFRSF13BO14836 293 aaPredicted RBP12.22□□□□□ -0.45
COL2A1-202ENST00000380518 LECT2O14960 151 aa12.21□□□□□ -0.45
COL2A1-202ENST00000380518 IGLV2-8P01709 118 aa12.21□□□□□ -0.45
COL2A1-202ENST00000380518 LMO4P61968 165 aa12.21□□□□□ -0.45
COL2A1-202ENST00000380518 Q6ZPA2 131 aa12.21□□□□□ -0.45
COL2A1-202ENST00000380518 LGALS9O00182 355 aa12.21□□□□□ -0.45
COL2A1-202ENST00000380518 TRBV10-2A0A0K0K1G8 114 aa12.21□□□□□ -0.45
COL2A1-202ENST00000380518 ZNF80P51504 273 aaPredicted RBP12.21□□□□□ -0.45
COL2A1-202ENST00000380518 CITED2Q99967 270 aaPredicted RBP12.21□□□□□ -0.46
COL2A1-202ENST00000380518 PRO0255Q9UI72 69 aa12.2□□□□□ -0.46
COL2A1-202ENST00000380518 MIR7-3HGQ8N6C7 128 aa12.2□□□□□ -0.46
COL2A1-202ENST00000380518 ATOX1O00244 68 aa12.2□□□□□ -0.46
COL2A1-202ENST00000380518 NREPQ16612 68 aa12.2□□□□□ -0.46
COL2A1-202ENST00000380518 FOXI1Q12951 378 aa12.2□□□□□ -0.46
COL2A1-202ENST00000380518 LINC00322Q6ZN03 302 aaPredicted RBP12.2□□□□□ -0.46
COL2A1-202ENST00000380518 PRR14LQ5THK1 2151 aa12.2□□□□□ -0.46
COL2A1-202ENST00000380518 IGKV3D-7A0A0C4DH55 119 aa12.19□□□□□ -0.46
COL2A1-202ENST00000380518 INSL3P51460 131 aa12.19□□□□□ -0.46
COL2A1-202ENST00000380518 MLST8Q9BVC4 326 aa12.19□□□□□ -0.46
COL2A1-202ENST00000380518 KLK12Q9UKR0 248 aa12.19□□□□□ -0.46
COL2A1-202ENST00000380518 LOXL1Q08397 574 aaPredicted RBP12.19□□□□□ -0.46
COL2A1-202ENST00000380518 RNASE8Q8TDE3 154 aaKnown RBP12.19□□□□□ -0.46
COL2A1-202ENST00000380518 MAP6D1Q9H9H5 199 aa12.18□□□□□ -0.46
COL2A1-202ENST00000380518 IGHV4-28A0A0C4DH34 117 aa12.18□□□□□ -0.46
COL2A1-202ENST00000380518 ZNF295-AS1Q8N0V1 137 aa12.18□□□□□ -0.46
COL2A1-202ENST00000380518 IGLC6P0CF74 106 aa12.18□□□□□ -0.46
COL2A1-202ENST00000380518 A0A1B0GX51 115 aa12.17□□□□□ -0.46
COL2A1-202ENST00000380518 F8W735 103 aaPredicted RBP12.17□□□□□ -0.46
COL2A1-202ENST00000380518 NCR3O14931 201 aa12.17□□□□□ -0.46
COL2A1-202ENST00000380518 NDUFB1O75438 58 aa12.17□□□□□ -0.46
COL2A1-202ENST00000380518 ODF3Q96PU9 254 aa12.17□□□□□ -0.46
COL2A1-202ENST00000380518 DEFB4AO15263 64 aa12.17□□□□□ -0.46
COL2A1-202ENST00000380518 CRIP3Q6Q6R5 217 aa12.17□□□□□ -0.46
COL2A1-202ENST00000380518 CLEC2BQ92478 149 aa12.17□□□□□ -0.46
COL2A1-202ENST00000380518 DIRC1Q969H9 104 aa12.17□□□□□ -0.46
COL2A1-202ENST00000380518 KIF26AQ9ULI4 1882 aaPredicted RBP12.17□□□□□ -0.46
COL2A1-202ENST00000380518 TM2D2Q9BX73 214 aa12.16□□□□□ -0.46
COL2A1-202ENST00000380518 C2CD3Q4AC94 2353 aa12.16□□□□□ -0.46
COL2A1-202ENST00000380518 FAM236AA0A1B0GUQ0 79 aa12.16□□□□□ -0.46
COL2A1-202ENST00000380518 FAM236BA0A1B0GV22 79 aa12.16□□□□□ -0.46
COL2A1-202ENST00000380518 IGF1P05019 195 aa12.16□□□□□ -0.46
COL2A1-202ENST00000380518 PSMB8P28062 276 aa12.16□□□□□ -0.46
COL2A1-202ENST00000380518 LINC01548A6NM66 108 aa12.16□□□□□ -0.46
COL2A1-202ENST00000380518 ARHGAP21Q5T5U3 1957 aa12.16□□□□□ -0.46
COL2A1-202ENST00000380518 Q6ZUT4 128 aa12.16□□□□□ -0.46
COL2A1-202ENST00000380518 FSTL3O95633 263 aa12.15□□□□□ -0.46
COL2A1-202ENST00000380518 NDUFA11Q86Y39 141 aa12.15□□□□□ -0.46
COL2A1-202ENST00000380518 SMAD5-AS1Q9Y6J3 95 aa12.15□□□□□ -0.46
COL2A1-202ENST00000380518 NAV2Q8IVL1 2488 aa12.15□□□□□ -0.47
COL2A1-202ENST00000380518 GDF5OSQ5U4N7 250 aa12.14□□□□□ -0.47
COL2A1-202ENST00000380518 CEMP1Q6PRD7 247 aaPredicted RBP12.14□□□□□ -0.47
COL2A1-202ENST00000380518 MP68P56378 58 aa12.14□□□□□ -0.47
COL2A1-202ENST00000380518 EIF4EBP1Q13541 118 aaPredicted RBP12.14□□□□□ -0.47
COL2A1-202ENST00000380518 MIAQ16674 131 aa12.14□□□□□ -0.47
COL2A1-202ENST00000380518 MBD6Q96DN6 1003 aa12.14□□□□□ -0.47
COL2A1-202ENST00000380518 DNAJC9-AS1A6NH13 148 aa12.13□□□□□ -0.47
COL2A1-202ENST00000380518 C1orf229Q6ZS94 237 aaPredicted RBP12.13□□□□□ -0.47
COL2A1-202ENST00000380518 SS18L2Q9UHA2 77 aa12.13□□□□□ -0.47
COL2A1-202ENST00000380518 K7EQG2 157 aa12.13□□□□□ -0.47
COL2A1-202ENST00000380518 TMEM256-PLSCR3K7ERE1 68 aa12.13□□□□□ -0.47
COL2A1-202ENST00000380518 CCDC168Q8NDH2 2452 aa12.13□□□□□ -0.47
COL2A1-202ENST00000380518 NAV3Q8IVL0 2385 aa12.12□□□□□ -0.47
COL2A1-202ENST00000380518 PLA2G5P39877 138 aa12.12□□□□□ -0.47
COL2A1-202ENST00000380518 NFE4Q86UQ8 179 aa12.12□□□□□ -0.47
COL2A1-202ENST00000380518 UBE2AP49459 152 aa12.12□□□□□ -0.47
COL2A1-202ENST00000380518 PDE6GP18545 87 aa12.11□□□□□ -0.47
COL2A1-202ENST00000380518 HIGD2BQ4VC39 106 aa12.11□□□□□ -0.47
COL2A1-202ENST00000380518 OBSL1O75147 1896 aa12.11□□□□□ -0.47
COL2A1-202ENST00000380518 CRYGBP07316 175 aa12.11□□□□□ -0.47
COL2A1-202ENST00000380518 Q6ZTI0 123 aa12.11□□□□□ -0.47
COL2A1-202ENST00000380518 TP53TG3Q9ULZ0 132 aa12.11□□□□□ -0.47
COL2A1-202ENST00000380518 A0A0J9YXY3 114 aa12.1□□□□□ -0.47
COL2A1-202ENST00000380518 C22orf34Q6ZV56 151 aa12.1□□□□□ -0.47
COL2A1-202ENST00000380518 EBI3Q14213 229 aa12.1□□□□□ -0.47
COL2A1-202ENST00000380518 DSCAML1Q8TD84 2053 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms