RNA–Protein interactions for RNA: ENST00000379013.6

UPK1A-202, Transcript of uroplakin 1A, humanhuman

TSL 1 (best) BASIC

Gene UPK1A, Length 1,016 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-202ENST00000379013 RPL36ALQ969Q0 106 aaKnown RBP9.75□□□□□ -0.85
UPK1A-202ENST00000379013 DNAJC30Q96LL9 226 aa9.75□□□□□ -0.85
UPK1A-202ENST00000379013 LAMTOR2Q9Y2Q5 125 aa9.75□□□□□ -0.85
UPK1A-202ENST00000379013 TRAV26-1A0A087WT03 109 aa9.74□□□□□ -0.85
UPK1A-202ENST00000379013 TGIF2-C20orf24A0A0A6YYL0 155 aa9.74□□□□□ -0.85
UPK1A-202ENST00000379013 APCSP02743 223 aa9.74□□□□□ -0.85
UPK1A-202ENST00000379013 RAB4AP20338 218 aa9.74□□□□□ -0.85
UPK1A-202ENST00000379013 CKS2P33552 79 aa9.74□□□□□ -0.85
UPK1A-202ENST00000379013 ORMDL3Q8N138 153 aa9.74□□□□□ -0.85
UPK1A-202ENST00000379013 SLC25A29Q8N8R3 303 aa9.74□□□□□ -0.85
UPK1A-202ENST00000379013 ICOSQ9Y6W8 199 aa9.74□□□□□ -0.85
UPK1A-202ENST00000379013 FAT2Q9NYQ8 4349 aa9.73□□□□□ -0.85
UPK1A-202ENST00000379013 PHOX2AO14813 284 aa9.73□□□□□ -0.85
UPK1A-202ENST00000379013 HOXA5P20719 270 aa9.73□□□□□ -0.85
UPK1A-202ENST00000379013 MRPL23Q16540 153 aaKnown RBP9.73□□□□□ -0.85
UPK1A-202ENST00000379013 SUMO4Q6EEV6 95 aa9.73□□□□□ -0.85
UPK1A-202ENST00000379013 TMEM136Q6ZRR5 245 aa9.73□□□□□ -0.85
UPK1A-202ENST00000379013 LINC00476Q8WZB0 136 aa9.73□□□□□ -0.85
UPK1A-202ENST00000379013 NIT2Q9NQR4 276 aa9.73□□□□□ -0.85
UPK1A-202ENST00000379013 TRAPPC1Q9Y5R8 145 aa9.73□□□□□ -0.85
UPK1A-202ENST00000379013 TNFRSF18Q9Y5U5 241 aa9.73□□□□□ -0.85
UPK1A-202ENST00000379013 SRIP30626 198 aa9.72□□□□□ -0.85
UPK1A-202ENST00000379013 LINC00315P59091 139 aa9.72□□□□□ -0.85
UPK1A-202ENST00000379013 YPEL4Q96NS1 127 aa9.72□□□□□ -0.85
UPK1A-202ENST00000379013 TRBV7-3A0A075B6L6 115 aa9.71□□□□□ -0.86
UPK1A-202ENST00000379013 M0QY20 66 aa9.71□□□□□ -0.86
UPK1A-202ENST00000379013 GYPEP15421 78 aa9.71□□□□□ -0.86
UPK1A-202ENST00000379013 FABP9Q0Z7S8 132 aa9.71□□□□□ -0.86
UPK1A-202ENST00000379013 MRPL51Q4U2R6 128 aaKnown RBP9.71□□□□□ -0.86
UPK1A-202ENST00000379013 OR10J3Q5JRS4 329 aa9.71□□□□□ -0.86
UPK1A-202ENST00000379013 RNF185Q96GF1 192 aa9.71□□□□□ -0.86
UPK1A-202ENST00000379013 MRPL18Q9H0U6 180 aaKnown RBP9.71□□□□□ -0.86
UPK1A-202ENST00000379013 IGLL5B9A064 214 aa9.7□□□□□ -0.86
UPK1A-202ENST00000379013 TCAPO15273 167 aa9.7□□□□□ -0.86
UPK1A-202ENST00000379013 SCO1O75880 301 aa9.7□□□□□ -0.86
UPK1A-202ENST00000379013 RAB5AP20339 215 aa9.7□□□□□ -0.86
UPK1A-202ENST00000379013 RPS10P46783 165 aaKnown RBP9.7□□□□□ -0.86
UPK1A-202ENST00000379013 TMEM97Q5BJF2 176 aa9.7□□□□□ -0.86
UPK1A-202ENST00000379013 HECTD4Q9Y4D8 3996 aa9.69□□□□□ -0.86
UPK1A-202ENST00000379013 A0A0J9YY99 117 aa9.69□□□□□ -0.86
UPK1A-202ENST00000379013 D6R8Y8 96 aa9.69□□□□□ -0.86
UPK1A-202ENST00000379013 LY6G6CO95867 125 aa9.69□□□□□ -0.86
UPK1A-202ENST00000379013 DAZ4Q86SG3 579 aaKnown RBP9.69□□□□□ -0.86
UPK1A-202ENST00000379013 PRELID3AQ96N28 172 aa9.69□□□□□ -0.86
UPK1A-202ENST00000379013 C20orf78Q9BR46 151 aa9.69□□□□□ -0.86
UPK1A-202ENST00000379013 ST20Q9HBF5 79 aa9.69□□□□□ -0.86
UPK1A-202ENST00000379013 DAZ3Q9NR90 486 aaKnown RBP9.69□□□□□ -0.86
UPK1A-202ENST00000379013 TRAV26-2A0A0B4J265 109 aa9.68□□□□□ -0.86
UPK1A-202ENST00000379013 TRBV6-5A0A0K0K1A5 114 aa9.68□□□□□ -0.86
UPK1A-202ENST00000379013 COLCA2A8K830 154 aa9.68□□□□□ -0.86
UPK1A-202ENST00000379013 NUDT3O95989 172 aa9.68□□□□□ -0.86
UPK1A-202ENST00000379013 NEGR1Q7Z3B1 354 aa9.68□□□□□ -0.86
UPK1A-202ENST00000379013 NEXN-AS1Q8NBZ9 246 aa9.68□□□□□ -0.86
UPK1A-202ENST00000379013 MAP1LC3AQ9H492 121 aa9.68□□□□□ -0.86
UPK1A-202ENST00000379013 SUMO2P61956 95 aaKnown RBP9.67□□□□□ -0.86
UPK1A-202ENST00000379013 ZNRF2Q8NHG8 242 aa9.67□□□□□ -0.86
UPK1A-202ENST00000379013 VSIG2Q96IQ7 327 aa9.67□□□□□ -0.86
UPK1A-202ENST00000379013 GAGE12JA6NER3 117 aa9.66□□□□□ -0.86
UPK1A-202ENST00000379013 TNFRSF6BO95407 300 aa9.66□□□□□ -0.86
UPK1A-202ENST00000379013 NCR2O95944 276 aa9.66□□□□□ -0.86
UPK1A-202ENST00000379013 PMCHP20382 165 aa9.66□□□□□ -0.86
UPK1A-202ENST00000379013 RPL32P62910 135 aaKnown RBP9.66□□□□□ -0.86
UPK1A-202ENST00000379013 GAGE1Q13065 139 aa9.66□□□□□ -0.86
UPK1A-202ENST00000379013 GAGE4Q13068 117 aa9.66□□□□□ -0.86
UPK1A-202ENST00000379013 GAGE5Q13069 117 aa9.66□□□□□ -0.86
UPK1A-202ENST00000379013 GAGE13Q4V321 117 aa9.66□□□□□ -0.86
UPK1A-202ENST00000379013 Q6ZSN1 163 aa9.66□□□□□ -0.86
UPK1A-202ENST00000379013 ATP6V0E2Q8NHE4 81 aa9.66□□□□□ -0.86
UPK1A-202ENST00000379013 KIR2DL4Q99706 377 aa9.66□□□□□ -0.86
UPK1A-202ENST00000379013 A0A096LPF7 62 aa9.65□□□□□ -0.86
UPK1A-202ENST00000379013 SDHAF1A6NFY7 115 aa9.65□□□□□ -0.86
UPK1A-202ENST00000379013 K7EMI3 77 aa9.65□□□□□ -0.86
UPK1A-202ENST00000379013 VCYO14598 125 aa9.65□□□□□ -0.86
UPK1A-202ENST00000379013 CCL18P55774 89 aa9.65□□□□□ -0.86
UPK1A-202ENST00000379013 TIRAPP58753 221 aa9.65□□□□□ -0.86
UPK1A-202ENST00000379013 UBE2D3P61077 147 aa9.65□□□□□ -0.86
UPK1A-202ENST00000379013 UBE2D2P62837 147 aa9.65□□□□□ -0.86
UPK1A-202ENST00000379013 I3L3M4 83 aa9.64□□□□□ -0.87
UPK1A-202ENST00000379013 P0DMU3 169 aa9.64□□□□□ -0.87
UPK1A-202ENST00000379013 FAM231AP0DMU4 169 aa9.64□□□□□ -0.87
UPK1A-202ENST00000379013 FAM231CP0DMU5 169 aa9.64□□□□□ -0.87
UPK1A-202ENST00000379013 LINC00694P0DN24 101 aa9.64□□□□□ -0.87
UPK1A-202ENST00000379013 PKIAP61925 76 aa9.64□□□□□ -0.87
UPK1A-202ENST00000379013 COTL1Q14019 142 aa9.64□□□□□ -0.87
UPK1A-202ENST00000379013 NRACQ8N912 160 aa9.64□□□□□ -0.87
UPK1A-202ENST00000379013 RPL39LQ96EH5 51 aaKnown RBP9.64□□□□□ -0.87
UPK1A-202ENST00000379013 GTSF1LQ9H1H1 148 aa9.64□□□□□ -0.87
UPK1A-202ENST00000379013 NXT2Q9NPJ8 142 aaKnown RBP9.64□□□□□ -0.87
UPK1A-202ENST00000379013 APLNQ9ULZ1 77 aa9.64□□□□□ -0.87
UPK1A-202ENST00000379013 TRBV27A0A0K0K1C4 114 aa9.63□□□□□ -0.87
UPK1A-202ENST00000379013 SMKR1H3BMG3 65 aa9.63□□□□□ -0.87
UPK1A-202ENST00000379013 TRGC2P03986 189 aa9.63□□□□□ -0.87
UPK1A-202ENST00000379013 G0S2P27469 103 aa9.63□□□□□ -0.87
UPK1A-202ENST00000379013 RAB5BP61020 215 aa9.63□□□□□ -0.87
UPK1A-202ENST00000379013 ALKBH7Q9BT30 221 aaPredicted RBP9.63□□□□□ -0.87
UPK1A-202ENST00000379013 TMEM70Q9BUB7 260 aa9.63□□□□□ -0.87
UPK1A-202ENST00000379013 SMIM2Q9BVW6 85 aa9.63□□□□□ -0.87
UPK1A-202ENST00000379013 PKHD1P08F94 4074 aa9.62□□□□□ -0.87
UPK1A-202ENST00000379013 DYNC1H1Q14204 4646 aaKnown RBP9.62□□□□□ -0.87
UPK1A-202ENST00000379013 LOC100131303A0A0U1RQF7 123 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms