RNA–Protein interactions for RNA: ENST00000377507.7

TNFRSF9-201, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF9, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-201ENST00000377507 CSMD2Q7Z408 3487 aa8.61□□□□□ -1.03
TNFRSF9-201ENST00000377507 TMEM223A0PJW6 202 aa8.6□□□□□ -1.03
TNFRSF9-201ENST00000377507 RBMY1BA6NDE4 496 aaKnown RBP8.6□□□□□ -1.03
TNFRSF9-201ENST00000377507 RBMY1EA6NEQ0 496 aaKnown RBP8.6□□□□□ -1.03
TNFRSF9-201ENST00000377507 H3BMG7 143 aa8.6□□□□□ -1.03
TNFRSF9-201ENST00000377507 RBMY1DP0C7P1 496 aaKnown RBP8.6□□□□□ -1.03
TNFRSF9-201ENST00000377507 DEFB131AP59861 70 aa8.6□□□□□ -1.03
TNFRSF9-201ENST00000377507 DLX4Q92988 240 aaPredicted RBP8.6□□□□□ -1.03
TNFRSF9-201ENST00000377507 OPRPNQ99935 248 aaPredicted RBP8.6□□□□□ -1.03
TNFRSF9-201ENST00000377507 PYGO1Q9Y3Y4 419 aa8.6□□□□□ -1.03
TNFRSF9-201ENST00000377507 FBN2P35556 2912 aa8.6□□□□□ -1.03
TNFRSF9-201ENST00000377507 TEX48A0A1B0GUV7 120 aa8.6□□□□□ -1.03
TNFRSF9-201ENST00000377507 J3QQQ9 107 aa8.6□□□□□ -1.03
TNFRSF9-201ENST00000377507 IGHV3-30P01768 117 aa8.6□□□□□ -1.03
TNFRSF9-201ENST00000377507 IGHV3-30-5P0DP03 117 aa8.6□□□□□ -1.03
TNFRSF9-201ENST00000377507 KRTAP10-9P60411 292 aa8.6□□□□□ -1.03
TNFRSF9-201ENST00000377507 WFDC2Q14508 124 aa8.6□□□□□ -1.03
TNFRSF9-201ENST00000377507 DEFB136Q30KP8 78 aa8.6□□□□□ -1.03
TNFRSF9-201ENST00000377507 DEFB113Q30KQ7 82 aa8.6□□□□□ -1.03
TNFRSF9-201ENST00000377507 C4orf3Q8WVX3 66 aa8.6□□□□□ -1.03
TNFRSF9-201ENST00000377507 LINC00467Q9BRT7 94 aa8.6□□□□□ -1.03
TNFRSF9-201ENST00000377507 PEMTQ9UBM1 199 aa8.6□□□□□ -1.03
TNFRSF9-201ENST00000377507 CR1P17927 2039 aa8.59□□□□□ -1.03
TNFRSF9-201ENST00000377507 IGLV4-3A0A075B6K6 122 aa8.59□□□□□ -1.03
TNFRSF9-201ENST00000377507 LEPROTO15243 131 aa8.59□□□□□ -1.03
TNFRSF9-201ENST00000377507 PRB1P04280 392 aa8.59□□□□□ -1.03
TNFRSF9-201ENST00000377507 CRYBA4P53673 196 aa8.59□□□□□ -1.03
TNFRSF9-201ENST00000377507 FAM104AQ969W3 186 aa8.59□□□□□ -1.03
TNFRSF9-201ENST00000377507 PGPEP1Q9NXJ5 209 aa8.59□□□□□ -1.03
TNFRSF9-201ENST00000377507 DOPEY2Q9Y3R5 2298 aa8.59□□□□□ -1.03
TNFRSF9-201ENST00000377507 PRRC2AP48634 2157 aaKnown RBP8.59□□□□□ -1.03
TNFRSF9-201ENST00000377507 A8MWV9 139 aa8.58□□□□□ -1.04
TNFRSF9-201ENST00000377507 M0R2P5 195 aa8.58□□□□□ -1.04
TNFRSF9-201ENST00000377507 RPL24P83731 157 aaKnown RBP8.58□□□□□ -1.04
TNFRSF9-201ENST00000377507 GAGE13Q4V321 117 aa8.58□□□□□ -1.04
TNFRSF9-201ENST00000377507 NDUFA11Q86Y39 141 aa8.58□□□□□ -1.04
TNFRSF9-201ENST00000377507 TMEM61Q8N0U2 210 aa8.58□□□□□ -1.04
TNFRSF9-201ENST00000377507 BBC3Q96PG8 261 aaPredicted RBP8.58□□□□□ -1.04
TNFRSF9-201ENST00000377507 RHODO00212 210 aa8.58□□□□□ -1.04
TNFRSF9-201ENST00000377507 ZNF22P17026 224 aaPredicted RBP8.58□□□□□ -1.04
TNFRSF9-201ENST00000377507 UBE2D3P61077 147 aa8.58□□□□□ -1.04
TNFRSF9-201ENST00000377507 UBE2D2P62837 147 aa8.58□□□□□ -1.04
TNFRSF9-201ENST00000377507 VCX2Q9H322 139 aa8.58□□□□□ -1.04
TNFRSF9-201ENST00000377507 MRPL16Q9NX20 251 aaKnown RBP8.58□□□□□ -1.04
TNFRSF9-201ENST00000377507 MAP1AP78559 2803 aaPredicted RBP8.57□□□□□ -1.04
TNFRSF9-201ENST00000377507 TSPAN13O95857 204 aa8.57□□□□□ -1.04
TNFRSF9-201ENST00000377507 COTL1Q14019 142 aa8.57□□□□□ -1.04
TNFRSF9-201ENST00000377507 CLUHP3Q96NS8 147 aa8.57□□□□□ -1.04
TNFRSF9-201ENST00000377507 CRYBG3Q68DQ2 2970 aa8.57□□□□□ -1.04
TNFRSF9-201ENST00000377507 USP9YO00507 2555 aaPredicted RBP8.57□□□□□ -1.04
TNFRSF9-201ENST00000377507 LGALS3P17931 250 aaKnown RBP8.56□□□□□ -1.04
TNFRSF9-201ENST00000377507 PROK1P58294 105 aa8.56□□□□□ -1.04
TNFRSF9-201ENST00000377507 DEFB114Q30KQ6 69 aa8.56□□□□□ -1.04
TNFRSF9-201ENST00000377507 ZNF843Q8N446 348 aa8.56□□□□□ -1.04
TNFRSF9-201ENST00000377507 TMEM86BQ8N661 226 aa8.56□□□□□ -1.04
TNFRSF9-201ENST00000377507 C11orf72Q8NBR9 251 aa8.56□□□□□ -1.04
TNFRSF9-201ENST00000377507 MAP6D1Q9H9H5 199 aa8.56□□□□□ -1.04
TNFRSF9-201ENST00000377507 A0A0J9YXV3 536 aa8.56□□□□□ -1.04
TNFRSF9-201ENST00000377507 CFC1BP0CG36 223 aa8.56□□□□□ -1.04
TNFRSF9-201ENST00000377507 CFC1P0CG37 223 aa8.56□□□□□ -1.04
TNFRSF9-201ENST00000377507 MRPS36P82909 103 aaKnown RBP8.56□□□□□ -1.04
TNFRSF9-201ENST00000377507 ZNF415Q09FC8 603 aa8.56□□□□□ -1.04
TNFRSF9-201ENST00000377507 KRTAP1-3Q8IUG1 177 aa8.56□□□□□ -1.04
TNFRSF9-201ENST00000377507 DUX3Q96PT4 197 aa8.56□□□□□ -1.04
TNFRSF9-201ENST00000377507 ANKRD17O75179 2603 aaKnown RBP8.55□□□□□ -1.04
TNFRSF9-201ENST00000377507 HTN1P15515 57 aa8.55□□□□□ -1.04
TNFRSF9-201ENST00000377507 BEAN1Q3B7T3 259 aa8.55□□□□□ -1.04
TNFRSF9-201ENST00000377507 CFAP126Q5VTH2 177 aa8.55□□□□□ -1.04
TNFRSF9-201ENST00000377507 Q6ZSN1 163 aa8.55□□□□□ -1.04
TNFRSF9-201ENST00000377507 SORL1Q92673 2214 aa8.55□□□□□ -1.04
TNFRSF9-201ENST00000377507 UTP20O75691 2785 aaKnown RBP8.55□□□□□ -1.04
TNFRSF9-201ENST00000377507 IGHV3-73A0A0B4J1V6 119 aa8.54□□□□□ -1.04
TNFRSF9-201ENST00000377507 PRM2P04554 102 aa8.54□□□□□ -1.04
TNFRSF9-201ENST00000377507 ETDBQ3ZM63 59 aa8.54□□□□□ -1.04
TNFRSF9-201ENST00000377507 TNFRSF18Q9Y5U5 241 aa8.54□□□□□ -1.04
TNFRSF9-201ENST00000377507 APOMO95445 188 aa8.54□□□□□ -1.04
TNFRSF9-201ENST00000377507 CD28P10747 220 aa8.54□□□□□ -1.04
TNFRSF9-201ENST00000377507 SH2D6Q7Z4S9 175 aa8.54□□□□□ -1.04
TNFRSF9-201ENST00000377507 C10orf126Q8N4M7 172 aa8.54□□□□□ -1.04
TNFRSF9-201ENST00000377507 DNAJC30Q96LL9 226 aa8.54□□□□□ -1.04
TNFRSF9-201ENST00000377507 Q96MF0 132 aa8.54□□□□□ -1.04
TNFRSF9-201ENST00000377507 SPXQ9BT56 116 aa8.54□□□□□ -1.04
TNFRSF9-201ENST00000377507 CHCHD7Q9BUK0 85 aa8.54□□□□□ -1.04
TNFRSF9-201ENST00000377507 ACACBO00763 2458 aa8.53□□□□□ -1.04
TNFRSF9-201ENST00000377507 ZANQ9Y493 2812 aa8.53□□□□□ -1.04
TNFRSF9-201ENST00000377507 J3QR89 54 aa8.53□□□□□ -1.04
TNFRSF9-201ENST00000377507 IGHV3-53P01767 116 aa8.53□□□□□ -1.04
TNFRSF9-201ENST00000377507 SPANXA1Q9NS26 97 aa8.53□□□□□ -1.04
TNFRSF9-201ENST00000377507 Q9UF83 564 aa8.53□□□□□ -1.04
TNFRSF9-201ENST00000377507 MYO18BQ8IUG5 2567 aa8.53□□□□□ -1.04
TNFRSF9-201ENST00000377507 SMCPP49901 116 aaPredicted RBP8.52□□□□□ -1.04
TNFRSF9-201ENST00000377507 LYRM7Q5U5X0 104 aa8.52□□□□□ -1.04
TNFRSF9-201ENST00000377507 DYNLRB2Q8TF09 96 aa8.52□□□□□ -1.04
TNFRSF9-201ENST00000377507 RAX2Q96IS3 184 aa8.52□□□□□ -1.04
TNFRSF9-201ENST00000377507 LINC01587Q99440 93 aa8.52□□□□□ -1.04
TNFRSF9-201ENST00000377507 PRO1854Q9UHT4 67 aa8.52□□□□□ -1.04
TNFRSF9-201ENST00000377507 UBE2D4Q9Y2X8 147 aa8.52□□□□□ -1.04
TNFRSF9-201ENST00000377507 MXRA5Q9NR99 2828 aa8.52□□□□□ -1.05
TNFRSF9-201ENST00000377507 TRBV20-1A0A075B6N2 111 aa8.52□□□□□ -1.05
TNFRSF9-201ENST00000377507 TRAV25A0A0B4J276 109 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms