RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 BAHCC1Q9P281 2608 aa9.4□□□□□ -0.9
TRIM40-206ENST00000376724 IGHV3-73A0A0B4J1V6 119 aa9.4□□□□□ -0.9
TRIM40-206ENST00000376724 FCER1GP30273 86 aa9.4□□□□□ -0.9
TRIM40-206ENST00000376724 MPV17L2Q567V2 206 aa9.4□□□□□ -0.9
TRIM40-206ENST00000376724 C9orf66Q5T8R8 295 aa9.4□□□□□ -0.9
TRIM40-206ENST00000376724 AMMECR1LQ6DCA0 310 aa9.4□□□□□ -0.9
TRIM40-206ENST00000376724 TMEM158Q8WZ71 300 aa9.4□□□□□ -0.9
TRIM40-206ENST00000376724 PMCHL2Q9BQD1 86 aa9.4□□□□□ -0.9
TRIM40-206ENST00000376724 GAGE12BA1L429 117 aa9.39□□□□□ -0.91
TRIM40-206ENST00000376724 M0R2P5 195 aa9.39□□□□□ -0.91
TRIM40-206ENST00000376724 LAGE3Q14657 143 aa9.39□□□□□ -0.91
TRIM40-206ENST00000376724 BVES-AS1Q5T3Y7 98 aa9.39□□□□□ -0.91
TRIM40-206ENST00000376724 ERASQ7Z444 233 aa9.39□□□□□ -0.91
TRIM40-206ENST00000376724 C11orf72Q8NBR9 251 aa9.39□□□□□ -0.91
TRIM40-206ENST00000376724 DEFB104AQ8WTQ1 72 aa9.39□□□□□ -0.91
TRIM40-206ENST00000376724 C20orf78Q9BR46 151 aa9.39□□□□□ -0.91
TRIM40-206ENST00000376724 LINC00467Q9BRT7 94 aa9.39□□□□□ -0.91
TRIM40-206ENST00000376724 GIG44P09565 113 aaPredicted RBP9.39□□□□□ -0.91
TRIM40-206ENST00000376724 NEGR1Q7Z3B1 354 aa9.39□□□□□ -0.91
TRIM40-206ENST00000376724 GTSCR1Q86UQ5 136 aa9.39□□□□□ -0.91
TRIM40-206ENST00000376724 MRPL16Q9NX20 251 aaKnown RBP9.39□□□□□ -0.91
TRIM40-206ENST00000376724 ATRQ13535 2644 aa9.39□□□□□ -0.91
TRIM40-206ENST00000376724 PPP1R17O96001 155 aa9.38□□□□□ -0.91
TRIM40-206ENST00000376724 INSL3P51460 131 aa9.38□□□□□ -0.91
TRIM40-206ENST00000376724 PET117Q6UWS5 81 aa9.38□□□□□ -0.91
TRIM40-206ENST00000376724 ST20Q9HBF5 79 aa9.38□□□□□ -0.91
TRIM40-206ENST00000376724 NUDT3O95989 172 aa9.38□□□□□ -0.91
TRIM40-206ENST00000376724 C12orf54Q6X4T0 127 aa9.38□□□□□ -0.91
TRIM40-206ENST00000376724 IFI27L1Q96BM0 104 aa9.38□□□□□ -0.91
TRIM40-206ENST00000376724 TEP1Q99973 2627 aaKnown RBP9.37□□□□□ -0.91
TRIM40-206ENST00000376724 VWFP04275 2813 aa9.37□□□□□ -0.91
TRIM40-206ENST00000376724 TMEM238LA0A1B0GVL6 79 aa9.37□□□□□ -0.91
TRIM40-206ENST00000376724 KRTAP24-1Q3LI83 254 aa9.37□□□□□ -0.91
TRIM40-206ENST00000376724 M0QY20 66 aa9.36□□□□□ -0.91
TRIM40-206ENST00000376724 SPXQ9BT56 116 aa9.36□□□□□ -0.91
TRIM40-206ENST00000376724 NOTCH3Q9UM47 2321 aa9.36□□□□□ -0.91
TRIM40-206ENST00000376724 SDHAF1A6NFY7 115 aa9.35□□□□□ -0.91
TRIM40-206ENST00000376724 A8MWV9 139 aa9.35□□□□□ -0.91
TRIM40-206ENST00000376724 LINC01545Q5VT33 79 aa9.35□□□□□ -0.91
TRIM40-206ENST00000376724 MORN3Q6PF18 240 aaPredicted RBP9.35□□□□□ -0.91
TRIM40-206ENST00000376724 SLC25A34Q6PIV7 304 aa9.35□□□□□ -0.91
TRIM40-206ENST00000376724 C1QTNF4Q9BXJ3 329 aa9.35□□□□□ -0.91
TRIM40-206ENST00000376724 TRGV1A0A0A0MS02 117 aa9.34□□□□□ -0.91
TRIM40-206ENST00000376724 RIPPLY3P57055 190 aa9.34□□□□□ -0.91
TRIM40-206ENST00000376724 ORMDL2Q53FV1 153 aa9.34□□□□□ -0.91
TRIM40-206ENST00000376724 CFAP126Q5VTH2 177 aa9.34□□□□□ -0.91
TRIM40-206ENST00000376724 TRAV8-6A0A0B4J262 113 aa9.34□□□□□ -0.91
TRIM40-206ENST00000376724 hDV102S1A0JD36 115 aa9.34□□□□□ -0.91
TRIM40-206ENST00000376724 G3V4G9 280 aa9.34□□□□□ -0.91
TRIM40-206ENST00000376724 P0DMU3 169 aa9.34□□□□□ -0.91
TRIM40-206ENST00000376724 FAM231AP0DMU4 169 aa9.34□□□□□ -0.91
TRIM40-206ENST00000376724 FAM231CP0DMU5 169 aa9.34□□□□□ -0.91
TRIM40-206ENST00000376724 POLR2KP53803 58 aaKnown RBP9.34□□□□□ -0.91
TRIM40-206ENST00000376724 TMEM263Q8WUH6 116 aaKnown RBP9.34□□□□□ -0.91
TRIM40-206ENST00000376724 VCYO14598 125 aa9.33□□□□□ -0.92
TRIM40-206ENST00000376724 PRSS1P07477 247 aa9.33□□□□□ -0.92
TRIM40-206ENST00000376724 CSNK1G2-AS1Q8NCQ2 148 aa9.33□□□□□ -0.92
TRIM40-206ENST00000376724 UFSP1Q6NVU6 142 aa9.32□□□□□ -0.92
TRIM40-206ENST00000376724 Q6ZSN1 163 aa9.32□□□□□ -0.92
TRIM40-206ENST00000376724 PTH2Q96A98 100 aa9.32□□□□□ -0.92
TRIM40-206ENST00000376724 KIR2DL4Q99706 377 aa9.32□□□□□ -0.92
TRIM40-206ENST00000376724 NOP10Q9NPE3 64 aaKnown RBP9.32□□□□□ -0.92
TRIM40-206ENST00000376724 TRBV6-5A0A0K0K1A5 114 aa9.32□□□□□ -0.92
TRIM40-206ENST00000376724 PIK3CD-AS1Q5SR53 167 aa9.32□□□□□ -0.92
TRIM40-206ENST00000376724 GAGE10A6NGK3 116 aa9.31□□□□□ -0.92
TRIM40-206ENST00000376724 H7C1H1 209 aa9.31□□□□□ -0.92
TRIM40-206ENST00000376724 K7EMI3 77 aa9.31□□□□□ -0.92
TRIM40-206ENST00000376724 C2orf66Q6UXQ4 117 aa9.31□□□□□ -0.92
TRIM40-206ENST00000376724 Q6ZTI0 123 aa9.31□□□□□ -0.92
TRIM40-206ENST00000376724 C3orf56Q8N813 242 aa9.31□□□□□ -0.92
TRIM40-206ENST00000376724 IL17DQ8TAD2 202 aa9.31□□□□□ -0.92
TRIM40-206ENST00000376724 DKK2Q9UBU2 259 aa9.31□□□□□ -0.92
TRIM40-206ENST00000376724 TP73-AS1Q9UF72 201 aa9.31□□□□□ -0.92
TRIM40-206ENST00000376724 TRRAPQ9Y4A5 3859 aa9.31□□□□□ -0.92
TRIM40-206ENST00000376724 RS1O15537 224 aa9.31□□□□□ -0.92
TRIM40-206ENST00000376724 ATP5LO75964 103 aa9.31□□□□□ -0.92
TRIM40-206ENST00000376724 RPL32P62910 135 aaKnown RBP9.31□□□□□ -0.92
TRIM40-206ENST00000376724 RRN3P1Q2M238 152 aa9.31□□□□□ -0.92
TRIM40-206ENST00000376724 LGALS9BQ3B8N2 356 aa9.31□□□□□ -0.92
TRIM40-206ENST00000376724 LGALS9CQ6DKI2 356 aa9.31□□□□□ -0.92
TRIM40-206ENST00000376724 ZFP2Q6ZN57 461 aa9.31□□□□□ -0.92
TRIM40-206ENST00000376724 PRIMA1Q86XR5 153 aa9.31□□□□□ -0.92
TRIM40-206ENST00000376724 WFDC9Q8NEX5 89 aa9.31□□□□□ -0.92
TRIM40-206ENST00000376724 TOMM6Q96B49 74 aa9.31□□□□□ -0.92
TRIM40-206ENST00000376724 C16orf74Q96GX8 76 aa9.31□□□□□ -0.92
TRIM40-206ENST00000376724 SCGB3A1Q96QR1 104 aa9.31□□□□□ -0.92
TRIM40-206ENST00000376724 Q9UF83 564 aa9.31□□□□□ -0.92
TRIM40-206ENST00000376724 TRBV27A0A0K0K1C4 114 aa9.3□□□□□ -0.92
TRIM40-206ENST00000376724 IGHV3-53P01767 116 aa9.3□□□□□ -0.92
TRIM40-206ENST00000376724 GTF2H5Q6ZYL4 71 aa9.3□□□□□ -0.92
TRIM40-206ENST00000376724 NACAE9PAV3 2078 aa9.3□□□□□ -0.92
TRIM40-206ENST00000376724 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.29□□□□□ -0.92
TRIM40-206ENST00000376724 RHODO00212 210 aa9.29□□□□□ -0.92
TRIM40-206ENST00000376724 EMP1P54849 157 aa9.29□□□□□ -0.92
TRIM40-206ENST00000376724 TNFRSF18Q9Y5U5 241 aa9.29□□□□□ -0.92
TRIM40-206ENST00000376724 PLAC8L1A1L4L8 177 aa9.29□□□□□ -0.92
TRIM40-206ENST00000376724 TCTAP57738 103 aa9.29□□□□□ -0.92
TRIM40-206ENST00000376724 ZNF479Q96JC4 524 aa9.29□□□□□ -0.92
TRIM40-206ENST00000376724 RPL39P62891 51 aaKnown RBP9.28□□□□□ -0.92
TRIM40-206ENST00000376724 SEC11AP67812 179 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms