RNA–Protein interactions for RNA: ENST00000376610.6

HDAC6-202, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-202ENST00000376610 USP17L23D6RBM5 183 aa12.02□□□□□ -0.49
HDAC6-202ENST00000376610 SNAI2O43623 268 aa12.02□□□□□ -0.49
HDAC6-202ENST00000376610 SERTAD4-AS1Q5TG53 156 aa12.02□□□□□ -0.49
HDAC6-202ENST00000376610 MBD3L1Q8WWY6 194 aa12.02□□□□□ -0.49
HDAC6-202ENST00000376610 AP1S3Q96PC3 154 aa12.02□□□□□ -0.49
HDAC6-202ENST00000376610 MUC21A0A0G2JKD1 596 aa12.01□□□□□ -0.49
HDAC6-202ENST00000376610 MUC21A0A140T8X8 626 aa12.01□□□□□ -0.49
HDAC6-202ENST00000376610 OXTP01178 125 aa12.01□□□□□ -0.49
HDAC6-202ENST00000376610 SSTP61278 116 aa12.01□□□□□ -0.49
HDAC6-202ENST00000376610 RGS21Q2M5E4 152 aa12.01□□□□□ -0.49
HDAC6-202ENST00000376610 MLST8Q9BVC4 326 aa12.01□□□□□ -0.49
HDAC6-202ENST00000376610 SSBP4Q9BWG4 385 aaPredicted RBP12.01□□□□□ -0.49
HDAC6-202ENST00000376610 LRP1Q07954 4544 aaKnown RBP12□□□□□ -0.49
HDAC6-202ENST00000376610 TRBV25-1A0A075B6N4 114 aa12□□□□□ -0.49
HDAC6-202ENST00000376610 ZNF345Q14585 488 aa12□□□□□ -0.49
HDAC6-202ENST00000376610 KCNRGQ8N5I3 272 aa12□□□□□ -0.49
HDAC6-202ENST00000376610 DERL1Q9BUN8 251 aa12□□□□□ -0.49
HDAC6-202ENST00000376610 VAX2Q9UIW0 290 aa12□□□□□ -0.49
HDAC6-202ENST00000376610 H2AFB1P0C5Y9 115 aa11.99□□□□□ -0.49
HDAC6-202ENST00000376610 DGAT2L7PQ6IED9 249 aa11.99□□□□□ -0.49
HDAC6-202ENST00000376610 TMUB2Q71RG4 321 aa11.99□□□□□ -0.49
HDAC6-202ENST00000376610 KANTRA0A1W2PQU2 76 aa11.98□□□□□ -0.49
HDAC6-202ENST00000376610 SMLR1H3BR10 107 aa11.98□□□□□ -0.49
HDAC6-202ENST00000376610 KRTAP10-4P60372 401 aaPredicted RBP11.98□□□□□ -0.49
HDAC6-202ENST00000376610 RPL37AP61513 92 aaKnown RBP11.98□□□□□ -0.49
HDAC6-202ENST00000376610 GAGE6Q13070 117 aa11.98□□□□□ -0.49
HDAC6-202ENST00000376610 H7C1H1 209 aa11.97□□□□□ -0.49
HDAC6-202ENST00000376610 RBX1P62877 108 aa11.97□□□□□ -0.49
HDAC6-202ENST00000376610 EIF5AP63241 154 aaKnown RBP11.97□□□□□ -0.49
HDAC6-202ENST00000376610 CLPSL2Q6UWE3 100 aa11.97□□□□□ -0.49
HDAC6-202ENST00000376610 LINC00269Q8N2A0 174 aa11.97□□□□□ -0.49
HDAC6-202ENST00000376610 TPPP3Q9BW30 176 aa11.97□□□□□ -0.49
HDAC6-202ENST00000376610 FAT3Q8TDW7 4589 aa11.96□□□□□ -0.49
HDAC6-202ENST00000376610 IGHV1-24A0A0C4DH33 117 aa11.96□□□□□ -0.49
HDAC6-202ENST00000376610 A0A0D9SG52 128 aa11.96□□□□□ -0.49
HDAC6-202ENST00000376610 PRSS1P07477 247 aa11.96□□□□□ -0.49
HDAC6-202ENST00000376610 MGPP08493 103 aa11.96□□□□□ -0.49
HDAC6-202ENST00000376610 RPL35P42766 123 aaKnown RBP11.96□□□□□ -0.49
HDAC6-202ENST00000376610 NTM-AS1Q6ZSK4 140 aa11.96□□□□□ -0.49
HDAC6-202ENST00000376610 DAZAP1Q96EP5 407 aaKnown RBP11.96□□□□□ -0.49
HDAC6-202ENST00000376610 PRR34Q9NV39 138 aa11.96□□□□□ -0.49
HDAC6-202ENST00000376610 C9orf163Q8N9P6 203 aa11.95□□□□□ -0.5
HDAC6-202ENST00000376610 KIF25-AS1Q9Y6Z4 181 aa11.95□□□□□ -0.5
HDAC6-202ENST00000376610 HMSDA8MTL9 139 aa11.94□□□□□ -0.5
HDAC6-202ENST00000376610 BCL2L11O43521 198 aa11.94□□□□□ -0.5
HDAC6-202ENST00000376610 RPS20P60866 119 aaKnown RBP11.94□□□□□ -0.5
HDAC6-202ENST00000376610 IQCJQ1A5X6 159 aa11.94□□□□□ -0.5
HDAC6-202ENST00000376610 CLRN3Q8NCR9 226 aa11.94□□□□□ -0.5
HDAC6-202ENST00000376610 MANBALQ9NQG1 85 aa11.94□□□□□ -0.5
HDAC6-202ENST00000376610 REG3AQ06141 175 aa11.93□□□□□ -0.5
HDAC6-202ENST00000376610 FER1L6-AS1Q8NA97 138 aa11.93□□□□□ -0.5
HDAC6-202ENST00000376610 XKRY2A2RUG3 117 aa11.92□□□□□ -0.5
HDAC6-202ENST00000376610 CACNG7P62955 275 aa11.92□□□□□ -0.5
HDAC6-202ENST00000376610 OR2D3Q8NGH3 330 aa11.92□□□□□ -0.5
HDAC6-202ENST00000376610 GNG13Q9P2W3 67 aa11.92□□□□□ -0.5
HDAC6-202ENST00000376610 PKHD1L1Q86WI1 4243 aa11.91□□□□□ -0.5
HDAC6-202ENST00000376610 IGLV10-54A0A075B6I4 117 aa11.91□□□□□ -0.5
HDAC6-202ENST00000376610 TEX46H3BTG2 121 aa11.91□□□□□ -0.5
HDAC6-202ENST00000376610 M0QY20 66 aa11.91□□□□□ -0.5
HDAC6-202ENST00000376610 CENPWQ5EE01 88 aa11.91□□□□□ -0.5
HDAC6-202ENST00000376610 HMCN2Q8NDA2 5059 aa11.91□□□□□ -0.5
HDAC6-202ENST00000376610 TRAV8-4A0A0B4J246 113 aa11.9□□□□□ -0.5
HDAC6-202ENST00000376610 P01737 135 aa11.9□□□□□ -0.5
HDAC6-202ENST00000376610 GZMBP10144 247 aa11.9□□□□□ -0.5
HDAC6-202ENST00000376610 SUMO4Q6EEV6 95 aa11.9□□□□□ -0.5
HDAC6-202ENST00000376610 C11orf52Q96A22 123 aa11.9□□□□□ -0.5
HDAC6-202ENST00000376610 TMEM243Q9BU79 118 aa11.9□□□□□ -0.5
HDAC6-202ENST00000376610 AP5S1Q9NUS5 200 aa11.9□□□□□ -0.5
HDAC6-202ENST00000376610 hDV102S1A0JD36 115 aa11.89□□□□□ -0.51
HDAC6-202ENST00000376610 F2Z2F3 143 aa11.89□□□□□ -0.51
HDAC6-202ENST00000376610 UBE2L6O14933 153 aa11.89□□□□□ -0.51
HDAC6-202ENST00000376610 TRGC1P0CF51 173 aa11.89□□□□□ -0.51
HDAC6-202ENST00000376610 IGLC6P0CF74 106 aa11.89□□□□□ -0.51
HDAC6-202ENST00000376610 GNG4P50150 75 aa11.89□□□□□ -0.51
HDAC6-202ENST00000376610 NKX2-5P52952 324 aaPredicted RBP11.89□□□□□ -0.51
HDAC6-202ENST00000376610 KRTAP26-1Q6PEX3 210 aa11.89□□□□□ -0.51
HDAC6-202ENST00000376610 RASL11AQ6T310 242 aa11.89□□□□□ -0.51
HDAC6-202ENST00000376610 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.88□□□□□ -0.51
HDAC6-202ENST00000376610 SMIM12Q96EX1 92 aa11.88□□□□□ -0.51
HDAC6-202ENST00000376610 BIN3Q9NQY0 253 aa11.88□□□□□ -0.51
HDAC6-202ENST00000376610 PLA2G2DQ9UNK4 145 aa11.88□□□□□ -0.51
HDAC6-202ENST00000376610 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.88□□□□□ -0.51
HDAC6-202ENST00000376610 A0A1B0GUV1 79 aa11.87□□□□□ -0.51
HDAC6-202ENST00000376610 RAB5CP51148 216 aa11.87□□□□□ -0.51
HDAC6-202ENST00000376610 CNBPP62633 177 aaKnown RBP11.87□□□□□ -0.51
HDAC6-202ENST00000376610 WDR73Q6P4I2 378 aa11.87□□□□□ -0.51
HDAC6-202ENST00000376610 SDIM1Q6ZPB5 146 aa11.87□□□□□ -0.51
HDAC6-202ENST00000376610 DPH3Q96FX2 82 aa11.87□□□□□ -0.51
HDAC6-202ENST00000376610 TRAV1-1A0A0B4J248 108 aa11.86□□□□□ -0.51
HDAC6-202ENST00000376610 IFNA1P01562 189 aa11.86□□□□□ -0.51
HDAC6-202ENST00000376610 CCL20P78556 96 aa11.86□□□□□ -0.51
HDAC6-202ENST00000376610 EIF5AL1Q6IS14 154 aaKnown RBP11.86□□□□□ -0.51
HDAC6-202ENST00000376610 C20orf203Q8NBC4 194 aa11.86□□□□□ -0.51
HDAC6-202ENST00000376610 PGLYRP4Q96LB8 373 aa11.86□□□□□ -0.51
HDAC6-202ENST00000376610 DPH3P1Q9H4G8 78 aa11.86□□□□□ -0.51
HDAC6-202ENST00000376610 NIT2Q9NQR4 276 aa11.86□□□□□ -0.51
HDAC6-202ENST00000376610 IGHV3-64A0A075B6Q5 118 aa11.85□□□□□ -0.51
HDAC6-202ENST00000376610 C19orf71A6NCJ1 209 aa11.85□□□□□ -0.51
HDAC6-202ENST00000376610 PDE6DO43924 150 aa11.85□□□□□ -0.51
HDAC6-202ENST00000376610 COTL1Q14019 142 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms