RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 HIGD2AQ9BW72 106 aa11.28□□□□□ -0.6
NOTCH4-201ENST00000375023 SHISA2Q6UWI4 295 aa11.27□□□□□ -0.61
NOTCH4-201ENST00000375023 POU2AF1Q16633 256 aa11.26□□□□□ -0.61
NOTCH4-201ENST00000375023 C9orf85Q96MD7 179 aa11.26□□□□□ -0.61
NOTCH4-201ENST00000375023 ZNF106Q9H2Y7 1883 aaKnown RBP11.26□□□□□ -0.61
NOTCH4-201ENST00000375023 IGF2-ASQ6U949 168 aa11.26□□□□□ -0.61
NOTCH4-201ENST00000375023 C7orf33Q8WU49 177 aa11.26□□□□□ -0.61
NOTCH4-201ENST00000375023 PKIGQ9Y2B9 76 aa11.26□□□□□ -0.61
NOTCH4-201ENST00000375023 MIR7-3HGQ8N6C7 128 aa11.26□□□□□ -0.61
NOTCH4-201ENST00000375023 B9D2Q9BPU9 175 aa11.26□□□□□ -0.61
NOTCH4-201ENST00000375023 TEX22C9J3V5 150 aa11.26□□□□□ -0.61
NOTCH4-201ENST00000375023 NDUFB1O75438 58 aa11.26□□□□□ -0.61
NOTCH4-201ENST00000375023 C4orf3Q8WVX3 66 aa11.26□□□□□ -0.61
NOTCH4-201ENST00000375023 FXYD2P54710 66 aa11.25□□□□□ -0.61
NOTCH4-201ENST00000375023 SPINK6Q6UWN8 80 aa11.25□□□□□ -0.61
NOTCH4-201ENST00000375023 C10orf91Q5T1B1 145 aa11.25□□□□□ -0.61
NOTCH4-201ENST00000375023 A0A1B0GX51 115 aa11.25□□□□□ -0.61
NOTCH4-201ENST00000375023 ACYP1P07311 99 aa11.25□□□□□ -0.61
NOTCH4-201ENST00000375023 PLA2G2EQ9NZK7 142 aa11.24□□□□□ -0.61
NOTCH4-201ENST00000375023 IGLV2-11P01706 119 aa11.24□□□□□ -0.61
NOTCH4-201ENST00000375023 SVIPQ8NHG7 77 aa11.24□□□□□ -0.61
NOTCH4-201ENST00000375023 OXLD1Q5BKU9 147 aa11.24□□□□□ -0.61
NOTCH4-201ENST00000375023 OBSL1O75147 1896 aa11.24□□□□□ -0.61
NOTCH4-201ENST00000375023 NCOA6Q14686 2063 aaPredicted RBP11.23□□□□□ -0.61
NOTCH4-201ENST00000375023 WFDC2Q14508 124 aa11.23□□□□□ -0.61
NOTCH4-201ENST00000375023 IGKV4-1P06312 121 aa11.23□□□□□ -0.61
NOTCH4-201ENST00000375023 MSMPQ1L6U9 139 aa11.23□□□□□ -0.61
NOTCH4-201ENST00000375023 LINC00269Q8N2A0 174 aa11.23□□□□□ -0.61
NOTCH4-201ENST00000375023 PSMB8P28062 276 aa11.23□□□□□ -0.61
NOTCH4-201ENST00000375023 MYCNOSP40205 109 aa11.23□□□□□ -0.61
NOTCH4-201ENST00000375023 WI2-2373I1.2A0A1W2PRP0 233 aa11.23□□□□□ -0.61
NOTCH4-201ENST00000375023 IGHV4-31P0DP07 118 aa11.23□□□□□ -0.61
NOTCH4-201ENST00000375023 SIVA1O15304 175 aa11.22□□□□□ -0.61
NOTCH4-201ENST00000375023 Q6ZUT4 128 aa11.22□□□□□ -0.61
NOTCH4-201ENST00000375023 FAM19A5Q7Z5A7 132 aaPredicted RBP11.22□□□□□ -0.61
NOTCH4-201ENST00000375023 ODF3L1Q8IXM7 274 aa11.22□□□□□ -0.61
NOTCH4-201ENST00000375023 FAM236AA0A1B0GUQ0 79 aa11.22□□□□□ -0.61
NOTCH4-201ENST00000375023 FAM236BA0A1B0GV22 79 aa11.22□□□□□ -0.61
NOTCH4-201ENST00000375023 LGALS9O00182 355 aa11.22□□□□□ -0.61
NOTCH4-201ENST00000375023 ZFHX2Q9C0A1 2572 aaPredicted RBP11.22□□□□□ -0.61
NOTCH4-201ENST00000375023 NFE4Q86UQ8 179 aa11.21□□□□□ -0.61
NOTCH4-201ENST00000375023 TMEM258P61165 79 aa11.21□□□□□ -0.61
NOTCH4-201ENST00000375023 SCXQ7RTU7 201 aa11.21□□□□□ -0.61
NOTCH4-201ENST00000375023 MAP6D1Q9H9H5 199 aa11.21□□□□□ -0.61
NOTCH4-201ENST00000375023 NUP210Q8TEM1 1887 aaPredicted RBP11.21□□□□□ -0.61
NOTCH4-201ENST00000375023 C11orf86A6NJI1 115 aa11.21□□□□□ -0.62
NOTCH4-201ENST00000375023 Q6ZTI0 123 aa11.21□□□□□ -0.62
NOTCH4-201ENST00000375023 PPDPFQ9H3Y8 114 aa11.21□□□□□ -0.62
NOTCH4-201ENST00000375023 NDUFA11Q86Y39 141 aa11.2□□□□□ -0.62
NOTCH4-201ENST00000375023 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.2□□□□□ -0.62
NOTCH4-201ENST00000375023 FAM167A-AS1Q96KT0 104 aa11.2□□□□□ -0.62
NOTCH4-201ENST00000375023 IGKV1D-37A0A075B6S9 117 aa11.2□□□□□ -0.62
NOTCH4-201ENST00000375023 DIRC1Q969H9 104 aa11.2□□□□□ -0.62
NOTCH4-201ENST00000375023 PTH2Q96A98 100 aa11.2□□□□□ -0.62
NOTCH4-201ENST00000375023 A0A0J9YWU9 116 aa11.2□□□□□ -0.62
NOTCH4-201ENST00000375023 IGFL2Q6UWQ7 119 aa11.2□□□□□ -0.62
NOTCH4-201ENST00000375023 COL4A3Q01955 1670 aa11.2□□□□□ -0.62
NOTCH4-201ENST00000375023 FAM236DA0A1B0GTK5 79 aa11.2□□□□□ -0.62
NOTCH4-201ENST00000375023 FAM236CP0DP71 79 aa11.2□□□□□ -0.62
NOTCH4-201ENST00000375023 TOMM6Q96B49 74 aa11.2□□□□□ -0.62
NOTCH4-201ENST00000375023 PLXNB3Q9ULL4 1909 aa11.19□□□□□ -0.62
NOTCH4-201ENST00000375023 CASC2Q6XLA1 102 aa11.19□□□□□ -0.62
NOTCH4-201ENST00000375023 IGLV2-14P01704 120 aa11.19□□□□□ -0.62
NOTCH4-201ENST00000375023 SEC61GP60059 68 aa11.19□□□□□ -0.62
NOTCH4-201ENST00000375023 PTPRQQ9UMZ3 2332 aa11.19□□□□□ -0.62
NOTCH4-201ENST00000375023 NUPR2A6NF83 97 aa11.19□□□□□ -0.62
NOTCH4-201ENST00000375023 LENEPQ9Y5L5 61 aa11.19□□□□□ -0.62
NOTCH4-201ENST00000375023 C10orf99Q6UWK7 81 aa11.19□□□□□ -0.62
NOTCH4-201ENST00000375023 MP68P56378 58 aa11.18□□□□□ -0.62
NOTCH4-201ENST00000375023 FAM19A1Q7Z5A9 133 aa11.18□□□□□ -0.62
NOTCH4-201ENST00000375023 A0A0B4J2C4 111 aa11.18□□□□□ -0.62
NOTCH4-201ENST00000375023 SLPIP03973 132 aa11.18□□□□□ -0.62
NOTCH4-201ENST00000375023 LOXL1Q08397 574 aaPredicted RBP11.18□□□□□ -0.62
NOTCH4-201ENST00000375023 IL15RAQ13261 267 aa11.18□□□□□ -0.62
NOTCH4-201ENST00000375023 DCANP1Q8TF63 244 aa11.18□□□□□ -0.62
NOTCH4-201ENST00000375023 ODF1Q14990 250 aa11.17□□□□□ -0.62
NOTCH4-201ENST00000375023 TNRC6AQ8NDV7 1962 aaKnown RBP11.17□□□□□ -0.62
NOTCH4-201ENST00000375023 Q8NA96 180 aa11.17□□□□□ -0.62
NOTCH4-201ENST00000375023 C2orf16Q68DN1 1984 aa11.17□□□□□ -0.62
NOTCH4-201ENST00000375023 FAM222AQ5U5X8 452 aa11.16□□□□□ -0.62
NOTCH4-201ENST00000375023 RNF152Q8N8N0 203 aa11.16□□□□□ -0.62
NOTCH4-201ENST00000375023 ZNF80P51504 273 aaPredicted RBP11.16□□□□□ -0.62
NOTCH4-201ENST00000375023 LINC01620Q4KN68 170 aa11.16□□□□□ -0.62
NOTCH4-201ENST00000375023 TMEM263Q8WUH6 116 aaKnown RBP11.16□□□□□ -0.62
NOTCH4-201ENST00000375023 OTOGLQ3ZCN5 2332 aa11.16□□□□□ -0.62
NOTCH4-201ENST00000375023 KRTAP27-1Q3LI81 207 aa11.16□□□□□ -0.62
NOTCH4-201ENST00000375023 NANOS2P60321 138 aaKnown RBP11.15□□□□□ -0.62
NOTCH4-201ENST00000375023 WNK1Q9H4A3 2382 aa11.15□□□□□ -0.62
NOTCH4-201ENST00000375023 LINC00526Q96FQ7 95 aa11.15□□□□□ -0.62
NOTCH4-201ENST00000375023 PROK1P58294 105 aa11.15□□□□□ -0.62
NOTCH4-201ENST00000375023 TRAV23DV6A0A075B6W5 121 aa11.15□□□□□ -0.63
NOTCH4-201ENST00000375023 CCDC140Q96MF4 163 aa11.15□□□□□ -0.63
NOTCH4-201ENST00000375023 TRBV6-1A0A0K0K1D8 114 aa11.14□□□□□ -0.63
NOTCH4-201ENST00000375023 LINC01545Q5VT33 79 aa11.14□□□□□ -0.63
NOTCH4-201ENST00000375023 TP73-AS1Q9UF72 201 aa11.14□□□□□ -0.63
NOTCH4-201ENST00000375023 KIAA1549Q9HCM3 1950 aa11.14□□□□□ -0.63
NOTCH4-201ENST00000375023 H0YGX0 51 aa11.14□□□□□ -0.63
NOTCH4-201ENST00000375023 MED12LQ86YW9 2145 aa11.14□□□□□ -0.63
NOTCH4-201ENST00000375023 FAM208BQ5VWN6 2430 aa11.14□□□□□ -0.63
NOTCH4-201ENST00000375023 A6NDX4 124 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms