RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 MED14OSP0DP75 135 aa4.9□□□□□ -1.62
PTPN3-202ENST00000374541 DEFB104AQ8WTQ1 72 aa4.9□□□□□ -1.62
PTPN3-202ENST00000374541 SND1-IT1Q9HBX3 110 aa4.9□□□□□ -1.62
PTPN3-202ENST00000374541 ARFGEF3Q5TH69 2177 aa4.9□□□□□ -1.63
PTPN3-202ENST00000374541 TRAV4A0A0B4J268 109 aa4.9□□□□□ -1.63
PTPN3-202ENST00000374541 DAZ2Q13117 558 aaKnown RBP4.9□□□□□ -1.63
PTPN3-202ENST00000374541 DAZ4Q86SG3 579 aaKnown RBP4.9□□□□□ -1.63
PTPN3-202ENST00000374541 PROK2Q9HC23 129 aa4.9□□□□□ -1.63
PTPN3-202ENST00000374541 DAZ3Q9NR90 486 aaKnown RBP4.9□□□□□ -1.63
PTPN3-202ENST00000374541 FREM3P0C091 2139 aa4.9□□□□□ -1.63
PTPN3-202ENST00000374541 MLANAQ16655 118 aa4.9□□□□□ -1.63
PTPN3-202ENST00000374541 ATP5EP56381 51 aaPredicted RBP4.9□□□□□ -1.63
PTPN3-202ENST00000374541 LINC00643Q86TS7 51 aa4.9□□□□□ -1.63
PTPN3-202ENST00000374541 ZNF295-AS1Q8N0V1 137 aa4.9□□□□□ -1.63
PTPN3-202ENST00000374541 SVIPQ8NHG7 77 aa4.9□□□□□ -1.63
PTPN3-202ENST00000374541 BAALCQ8WXS3 180 aa4.9□□□□□ -1.63
PTPN3-202ENST00000374541 V9GYY9 64 aa4.9□□□□□ -1.63
PTPN3-202ENST00000374541 ADAMTS20P59510 1910 aa4.89□□□□□ -1.63
PTPN3-202ENST00000374541 NUPR2A6NF83 97 aa4.89□□□□□ -1.63
PTPN3-202ENST00000374541 IGLV1-44P01699 117 aa4.89□□□□□ -1.63
PTPN3-202ENST00000374541 Q6YL49 198 aa4.89□□□□□ -1.63
PTPN3-202ENST00000374541 A0A0J9YY99 117 aa4.89□□□□□ -1.63
PTPN3-202ENST00000374541 K7ERS5 55 aa4.89□□□□□ -1.63
PTPN3-202ENST00000374541 FOXI1Q12951 378 aa4.89□□□□□ -1.63
PTPN3-202ENST00000374541 TIMM17AQ99595 171 aa4.89□□□□□ -1.63
PTPN3-202ENST00000374541 TNRC6AQ8NDV7 1962 aaKnown RBP4.89□□□□□ -1.63
PTPN3-202ENST00000374541 IGHV3-38A0A0C4DH36 116 aa4.89□□□□□ -1.63
PTPN3-202ENST00000374541 TIRAPP58753 221 aa4.89□□□□□ -1.63
PTPN3-202ENST00000374541 BLCAPP62952 87 aa4.89□□□□□ -1.63
PTPN3-202ENST00000374541 KAAG1Q9UBP8 84 aa4.89□□□□□ -1.63
PTPN3-202ENST00000374541 JMJD1CQ15652 2540 aa4.89□□□□□ -1.63
PTPN3-202ENST00000374541 IGKV2D-24A0A075B6R9 120 aa4.89□□□□□ -1.63
PTPN3-202ENST00000374541 Q8N1Y9 231 aa4.89□□□□□ -1.63
PTPN3-202ENST00000374541 CEP192Q8TEP8 1941 aa4.89□□□□□ -1.63
PTPN3-202ENST00000374541 WT1-ASQ06250 92 aa4.89□□□□□ -1.63
PTPN3-202ENST00000374541 SEM1Q6ZVN7 128 aa4.89□□□□□ -1.63
PTPN3-202ENST00000374541 COX7B2Q8TF08 81 aa4.89□□□□□ -1.63
PTPN3-202ENST00000374541 ZNF503Q96F45 646 aa4.89□□□□□ -1.63
PTPN3-202ENST00000374541 C16orf74Q96GX8 76 aa4.89□□□□□ -1.63
PTPN3-202ENST00000374541 IGF2BP2-AS1Q96M15 143 aa4.89□□□□□ -1.63
PTPN3-202ENST00000374541 CSMD2Q7Z408 3487 aa4.89□□□□□ -1.63
PTPN3-202ENST00000374541 IGLV3-9A0A075B6K5 115 aa4.88□□□□□ -1.63
PTPN3-202ENST00000374541 LOXP28300 417 aaPredicted RBP4.88□□□□□ -1.63
PTPN3-202ENST00000374541 CAMK2N2Q96S95 79 aa4.88□□□□□ -1.63
PTPN3-202ENST00000374541 ZNRD1Q9P1U0 126 aa4.88□□□□□ -1.63
PTPN3-202ENST00000374541 SVEP1Q4LDE5 3571 aa4.88□□□□□ -1.63
PTPN3-202ENST00000374541 ODF1Q14990 250 aa4.88□□□□□ -1.63
PTPN3-202ENST00000374541 C4orf3Q8WVX3 66 aa4.88□□□□□ -1.63
PTPN3-202ENST00000374541 TM2D2Q9BX73 214 aa4.88□□□□□ -1.63
PTPN3-202ENST00000374541 IGKV1OR2-108A0A075B7D4 117 aa4.88□□□□□ -1.63
PTPN3-202ENST00000374541 TMEM256-PLSCR3K7ERE1 68 aa4.88□□□□□ -1.63
PTPN3-202ENST00000374541 COX7A2LO14548 114 aa4.88□□□□□ -1.63
PTPN3-202ENST00000374541 IGKV1-39P01597 117 aa4.88□□□□□ -1.63
PTPN3-202ENST00000374541 IGKV1D-39P04432 117 aa4.88□□□□□ -1.63
PTPN3-202ENST00000374541 C17orf58Q2M2W7 97 aa4.88□□□□□ -1.63
PTPN3-202ENST00000374541 ZNF491Q8N8L2 437 aa4.88□□□□□ -1.63
PTPN3-202ENST00000374541 IGLV2-18A0A075B6J9 118 aa4.88□□□□□ -1.63
PTPN3-202ENST00000374541 K7EQD1 137 aa4.88□□□□□ -1.63
PTPN3-202ENST00000374541 NDUFA1O15239 70 aa4.88□□□□□ -1.63
PTPN3-202ENST00000374541 C1orf147Q96MC9 270 aaPredicted RBP4.88□□□□□ -1.63
PTPN3-202ENST00000374541 A0A096LPF7 62 aa4.88□□□□□ -1.63
PTPN3-202ENST00000374541 C11orf86A6NJI1 115 aa4.88□□□□□ -1.63
PTPN3-202ENST00000374541 KIAA1549LQ6ZVL6 1849 aa4.88□□□□□ -1.63
PTPN3-202ENST00000374541 FAM240AA0A1B0GVK7 77 aa4.87□□□□□ -1.63
PTPN3-202ENST00000374541 HIGD2BQ4VC39 106 aa4.87□□□□□ -1.63
PTPN3-202ENST00000374541 C14orf132Q9NPU4 83 aa4.87□□□□□ -1.63
PTPN3-202ENST00000374541 VPS13CQ709C8 3753 aa4.87□□□□□ -1.63
PTPN3-202ENST00000374541 A4D1N5 150 aa4.87□□□□□ -1.63
PTPN3-202ENST00000374541 C15orf65H3BRN8 121 aa4.87□□□□□ -1.63
PTPN3-202ENST00000374541 BUB3O43684 328 aa4.87□□□□□ -1.63
PTPN3-202ENST00000374541 CRYGBP07316 175 aa4.87□□□□□ -1.63
PTPN3-202ENST00000374541 XCL1P47992 114 aa4.87□□□□□ -1.63
PTPN3-202ENST00000374541 PLXNA2O75051 1894 aa4.87□□□□□ -1.63
PTPN3-202ENST00000374541 DEFB4AO15263 64 aa4.87□□□□□ -1.63
PTPN3-202ENST00000374541 IGF1P05019 195 aa4.87□□□□□ -1.63
PTPN3-202ENST00000374541 PCP2Q8IVA1 136 aa4.87□□□□□ -1.63
PTPN3-202ENST00000374541 TRBV6-1A0A0K0K1D8 114 aa4.87□□□□□ -1.63
PTPN3-202ENST00000374541 TRBV12-3P01733 135 aa4.87□□□□□ -1.63
PTPN3-202ENST00000374541 AGPAT4-IT1Q9H0P7 198 aa4.87□□□□□ -1.63
PTPN3-202ENST00000374541 E9PLD3 99 aa4.87□□□□□ -1.63
PTPN3-202ENST00000374541 Q6ZSV7 163 aa4.87□□□□□ -1.63
PTPN3-202ENST00000374541 DIRC1Q969H9 104 aa4.87□□□□□ -1.63
PTPN3-202ENST00000374541 K7EN84 100 aa4.86□□□□□ -1.63
PTPN3-202ENST00000374541 PRB4P10163 310 aaPredicted RBP4.86□□□□□ -1.63
PTPN3-202ENST00000374541 TNFRSF13BO14836 293 aaPredicted RBP4.86□□□□□ -1.63
PTPN3-202ENST00000374541 UQCRQO14949 82 aa4.86□□□□□ -1.63
PTPN3-202ENST00000374541 U3KQE9 123 aa4.86□□□□□ -1.63
PTPN3-202ENST00000374541 DENND4AQ7Z401 1863 aa4.86□□□□□ -1.63
PTPN3-202ENST00000374541 TRAV12-2A0A075B6T6 113 aa4.86□□□□□ -1.63
PTPN3-202ENST00000374541 WISP2O76076 250 aa4.86□□□□□ -1.63
PTPN3-202ENST00000374541 IGKV3D-7A0A0C4DH55 119 aa4.86□□□□□ -1.63
PTPN3-202ENST00000374541 LGALS9O00182 355 aa4.86□□□□□ -1.63
PTPN3-202ENST00000374541 LINC01006Q8NI28 216 aa4.86□□□□□ -1.63
PTPN3-202ENST00000374541 BRK1Q8WUW1 75 aa4.86□□□□□ -1.63
PTPN3-202ENST00000374541 Q6ZUT4 128 aa4.86□□□□□ -1.63
PTPN3-202ENST00000374541 PRR15LQ9BU68 103 aa4.86□□□□□ -1.63
PTPN3-202ENST00000374541 ITPR1Q14643 2758 aa4.86□□□□□ -1.63
PTPN3-202ENST00000374541 FHL1Q13642 323 aa4.86□□□□□ -1.63
PTPN3-202ENST00000374541 DEFB105AQ8NG35 78 aa4.86□□□□□ -1.63
PTPN3-202ENST00000374541 WWC2-AS2Q96NR7 200 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms