RNA–Protein interactions for RNA: ENST00000374466.3

CSGALNACT2-201, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT2, Length 3,730 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT2-201ENST00000374466 ICOSQ9Y6W8 199 aa7.74□□□□□ -1.17
CSGALNACT2-201ENST00000374466 TMSB15BA0A087X1C1 80 aa7.73□□□□□ -1.17
CSGALNACT2-201ENST00000374466 DEFB131BA0A096LNP1 70 aa7.73□□□□□ -1.17
CSGALNACT2-201ENST00000374466 TGIF2-C20orf24A0A0A6YYL0 155 aa7.73□□□□□ -1.17
CSGALNACT2-201ENST00000374466 PHLDA1Q8WV24 401 aaPredicted RBP7.73□□□□□ -1.17
CSGALNACT2-201ENST00000374466 NBEAL1Q6ZS30 2694 aa7.73□□□□□ -1.17
CSGALNACT2-201ENST00000374466 APCSP02743 223 aa7.73□□□□□ -1.17
CSGALNACT2-201ENST00000374466 Q8N8P6 123 aa7.73□□□□□ -1.17
CSGALNACT2-201ENST00000374466 IGHV3OR16-12A0A075B7B8 117 aa7.72□□□□□ -1.17
CSGALNACT2-201ENST00000374466 PRB4P10163 310 aaPredicted RBP7.72□□□□□ -1.17
CSGALNACT2-201ENST00000374466 G0S2P27469 103 aa7.72□□□□□ -1.17
CSGALNACT2-201ENST00000374466 LYSTQ99698 3801 aa7.72□□□□□ -1.17
CSGALNACT2-201ENST00000374466 C14orf178Q8N769 122 aaPredicted RBP7.72□□□□□ -1.17
CSGALNACT2-201ENST00000374466 NXT2Q9NPJ8 142 aaKnown RBP7.72□□□□□ -1.17
CSGALNACT2-201ENST00000374466 COL7A1Q02388 2944 aa7.72□□□□□ -1.17
CSGALNACT2-201ENST00000374466 TRGV2A0A075B6R0 118 aa7.72□□□□□ -1.17
CSGALNACT2-201ENST00000374466 NANOS2P60321 138 aaKnown RBP7.72□□□□□ -1.17
CSGALNACT2-201ENST00000374466 PYGO1Q9Y3Y4 419 aa7.72□□□□□ -1.17
CSGALNACT2-201ENST00000374466 WNK1Q9H4A3 2382 aa7.71□□□□□ -1.17
CSGALNACT2-201ENST00000374466 LELP1Q5T871 98 aa7.71□□□□□ -1.17
CSGALNACT2-201ENST00000374466 LGALS9CQ6DKI2 356 aa7.71□□□□□ -1.17
CSGALNACT2-201ENST00000374466 CBLN2Q8IUK8 224 aa7.71□□□□□ -1.17
CSGALNACT2-201ENST00000374466 CHCHD1Q96BP2 118 aaKnown RBP7.71□□□□□ -1.17
CSGALNACT2-201ENST00000374466 MRPL18Q9H0U6 180 aaKnown RBP7.71□□□□□ -1.17
CSGALNACT2-201ENST00000374466 JPT2Q9H910 190 aa7.71□□□□□ -1.17
CSGALNACT2-201ENST00000374466 A0A1B0GUV1 79 aa7.71□□□□□ -1.18
CSGALNACT2-201ENST00000374466 VCYO14598 125 aa7.7□□□□□ -1.18
CSGALNACT2-201ENST00000374466 RPL36AP83881 106 aaKnown RBP7.7□□□□□ -1.18
CSGALNACT2-201ENST00000374466 RPL36ALQ969Q0 106 aaKnown RBP7.7□□□□□ -1.18
CSGALNACT2-201ENST00000374466 NOTCH3Q9UM47 2321 aa7.7□□□□□ -1.18
CSGALNACT2-201ENST00000374466 TNFRSF6BO95407 300 aa7.7□□□□□ -1.18
CSGALNACT2-201ENST00000374466 MRPS36P82909 103 aaKnown RBP7.7□□□□□ -1.18
CSGALNACT2-201ENST00000374466 TMEM70Q9BUB7 260 aa7.7□□□□□ -1.18
CSGALNACT2-201ENST00000374466 SMIM2Q9BVW6 85 aa7.7□□□□□ -1.18
CSGALNACT2-201ENST00000374466 I3L3M4 83 aa7.69□□□□□ -1.18
CSGALNACT2-201ENST00000374466 PAX4O43316 350 aa7.69□□□□□ -1.18
CSGALNACT2-201ENST00000374466 DNAH10OSP0CZ25 163 aa7.69□□□□□ -1.18
CSGALNACT2-201ENST00000374466 ZNF25P17030 456 aaPredicted RBP7.69□□□□□ -1.18
CSGALNACT2-201ENST00000374466 SUMO2P61956 95 aaKnown RBP7.69□□□□□ -1.18
CSGALNACT2-201ENST00000374466 CCL25O15444 150 aa7.69□□□□□ -1.18
CSGALNACT2-201ENST00000374466 PMCHP20382 165 aa7.69□□□□□ -1.18
CSGALNACT2-201ENST00000374466 TRGV4A0A0C4DH28 118 aa7.69□□□□□ -1.18
CSGALNACT2-201ENST00000374466 TSHBP01222 138 aa7.69□□□□□ -1.18
CSGALNACT2-201ENST00000374466 SMAGPQ0VAQ4 97 aa7.69□□□□□ -1.18
CSGALNACT2-201ENST00000374466 TMEM88Q6PEY1 159 aa7.69□□□□□ -1.18
CSGALNACT2-201ENST00000374466 ST20Q9HBF5 79 aa7.69□□□□□ -1.18
CSGALNACT2-201ENST00000374466 MRPL54Q6P161 138 aaKnown RBP7.68□□□□□ -1.18
CSGALNACT2-201ENST00000374466 TRAPPC1Q9Y5R8 145 aa7.68□□□□□ -1.18
CSGALNACT2-201ENST00000374466 RAB5BP61020 215 aa7.68□□□□□ -1.18
CSGALNACT2-201ENST00000374466 PDZD11Q5EBL8 140 aa7.68□□□□□ -1.18
CSGALNACT2-201ENST00000374466 LYPD5Q6UWN5 251 aa7.68□□□□□ -1.18
CSGALNACT2-201ENST00000374466 PRELID3AQ96N28 172 aa7.68□□□□□ -1.18
CSGALNACT2-201ENST00000374466 NEGR1Q7Z3B1 354 aa7.67□□□□□ -1.18
CSGALNACT2-201ENST00000374466 STARD9Q9P2P6 4700 aa7.67□□□□□ -1.18
CSGALNACT2-201ENST00000374466 LAGE3Q14657 143 aa7.67□□□□□ -1.18
CSGALNACT2-201ENST00000374466 CASC10Q5T4H9 136 aa7.67□□□□□ -1.18
CSGALNACT2-201ENST00000374466 D6R8Y8 96 aa7.67□□□□□ -1.18
CSGALNACT2-201ENST00000374466 P0DMU3 169 aa7.67□□□□□ -1.18
CSGALNACT2-201ENST00000374466 FAM231AP0DMU4 169 aa7.67□□□□□ -1.18
CSGALNACT2-201ENST00000374466 FAM231CP0DMU5 169 aa7.67□□□□□ -1.18
CSGALNACT2-201ENST00000374466 LINC01556Q5JQF7 62 aa7.67□□□□□ -1.18
CSGALNACT2-201ENST00000374466 C18orf32Q8TCD1 76 aa7.67□□□□□ -1.18
CSGALNACT2-201ENST00000374466 MAP1LC3AQ9H492 121 aa7.67□□□□□ -1.18
CSGALNACT2-201ENST00000374466 DNAH17Q9UFH2 4485 aa7.66□□□□□ -1.18
CSGALNACT2-201ENST00000374466 A0A087WWL8 130 aa7.66□□□□□ -1.18
CSGALNACT2-201ENST00000374466 ATP6V0E2Q8NHE4 81 aa7.66□□□□□ -1.18
CSGALNACT2-201ENST00000374466 URB1-AS1Q96HZ7 61 aa7.66□□□□□ -1.18
CSGALNACT2-201ENST00000374466 TRBV6-8A0A0A6YYG3 113 aa7.66□□□□□ -1.18
CSGALNACT2-201ENST00000374466 NPYP01303 97 aa7.66□□□□□ -1.18
CSGALNACT2-201ENST00000374466 DEFB130BP0DP73 79 aa7.66□□□□□ -1.18
CSGALNACT2-201ENST00000374466 DEFB130AP0DP74 79 aa7.66□□□□□ -1.18
CSGALNACT2-201ENST00000374466 SRIP30626 198 aa7.66□□□□□ -1.18
CSGALNACT2-201ENST00000374466 ORMDL2Q53FV1 153 aa7.66□□□□□ -1.18
CSGALNACT2-201ENST00000374466 LINC01561Q8N1V8 128 aa7.66□□□□□ -1.18
CSGALNACT2-201ENST00000374466 CKS2P33552 79 aa7.66□□□□□ -1.18
CSGALNACT2-201ENST00000374466 ZNF56Q15929 161 aa7.66□□□□□ -1.18
CSGALNACT2-201ENST00000374466 PLECQ15149 4684 aaKnown RBP7.66□□□□□ -1.18
CSGALNACT2-201ENST00000374466 CSMD3Q7Z407 3707 aa7.66□□□□□ -1.18
CSGALNACT2-201ENST00000374466 NTM-AS1Q6ZSK4 140 aa7.65□□□□□ -1.18
CSGALNACT2-201ENST00000374466 ODF1Q14990 250 aa7.65□□□□□ -1.18
CSGALNACT2-201ENST00000374466 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.65□□□□□ -1.18
CSGALNACT2-201ENST00000374466 GYPEP15421 78 aa7.65□□□□□ -1.19
CSGALNACT2-201ENST00000374466 RPS10P46783 165 aaKnown RBP7.65□□□□□ -1.19
CSGALNACT2-201ENST00000374466 SPANXA1Q9NS26 97 aa7.65□□□□□ -1.19
CSGALNACT2-201ENST00000374466 PRR34Q9NV39 138 aa7.65□□□□□ -1.19
CSGALNACT2-201ENST00000374466 IGHV1-24A0A0C4DH33 117 aa7.64□□□□□ -1.19
CSGALNACT2-201ENST00000374466 TIMM17AQ99595 171 aa7.64□□□□□ -1.19
CSGALNACT2-201ENST00000374466 TNFRSF18Q9Y5U5 241 aa7.64□□□□□ -1.19
CSGALNACT2-201ENST00000374466 SDHAF1A6NFY7 115 aa7.64□□□□□ -1.19
CSGALNACT2-201ENST00000374466 F5H768 121 aa7.64□□□□□ -1.19
CSGALNACT2-201ENST00000374466 DEFB4AO15263 64 aa7.64□□□□□ -1.19
CSGALNACT2-201ENST00000374466 HTN1P15515 57 aa7.64□□□□□ -1.19
CSGALNACT2-201ENST00000374466 TOMM6Q96B49 74 aa7.64□□□□□ -1.19
CSGALNACT2-201ENST00000374466 CAMPP49913 170 aa7.63□□□□□ -1.19
CSGALNACT2-201ENST00000374466 ZNRF2Q8NHG8 242 aa7.63□□□□□ -1.19
CSGALNACT2-201ENST00000374466 FAM104AQ969W3 186 aa7.63□□□□□ -1.19
CSGALNACT2-201ENST00000374466 RPL39LQ96EH5 51 aaKnown RBP7.63□□□□□ -1.19
CSGALNACT2-201ENST00000374466 EMP1P54849 157 aa7.63□□□□□ -1.19
CSGALNACT2-201ENST00000374466 LINC00310P59036 64 aa7.63□□□□□ -1.19
CSGALNACT2-201ENST00000374466 Q6ZR54 194 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms