RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 PMCHL2Q9BQD1 86 aa9.07□□□□□ -0.96
PRPF4-202ENST00000374199 DKK2Q9UBU2 259 aa9.07□□□□□ -0.96
PRPF4-202ENST00000374199 DAZ2Q13117 558 aaKnown RBP9.07□□□□□ -0.96
PRPF4-202ENST00000374199 C2orf91Q6ZV80 131 aa9.07□□□□□ -0.96
PRPF4-202ENST00000374199 BOD1L2Q8IYS8 172 aa9.07□□□□□ -0.96
PRPF4-202ENST00000374199 TIMM17AQ99595 171 aa9.07□□□□□ -0.96
PRPF4-202ENST00000374199 Q6ZVH6 145 aa9.07□□□□□ -0.96
PRPF4-202ENST00000374199 ERASQ7Z444 233 aa9.07□□□□□ -0.96
PRPF4-202ENST00000374199 ANKRD39Q53RE8 183 aa9.06□□□□□ -0.96
PRPF4-202ENST00000374199 SDHAF1A6NFY7 115 aa9.06□□□□□ -0.96
PRPF4-202ENST00000374199 IGHV3-53P01767 116 aa9.06□□□□□ -0.96
PRPF4-202ENST00000374199 COL5A1-AS1Q5SY13 56 aa9.06□□□□□ -0.96
PRPF4-202ENST00000374199 STPG4Q8N801 248 aa9.06□□□□□ -0.96
PRPF4-202ENST00000374199 TMEM263Q8WUH6 116 aaKnown RBP9.06□□□□□ -0.96
PRPF4-202ENST00000374199 FAM104AQ969W3 186 aa9.06□□□□□ -0.96
PRPF4-202ENST00000374199 OVOL2Q9BRP0 275 aa9.06□□□□□ -0.96
PRPF4-202ENST00000374199 RHODO00212 210 aa9.05□□□□□ -0.96
PRPF4-202ENST00000374199 SIVA1O15304 175 aa9.05□□□□□ -0.96
PRPF4-202ENST00000374199 P0DMU3 169 aa9.05□□□□□ -0.96
PRPF4-202ENST00000374199 FAM231AP0DMU4 169 aa9.05□□□□□ -0.96
PRPF4-202ENST00000374199 FAM231CP0DMU5 169 aa9.05□□□□□ -0.96
PRPF4-202ENST00000374199 AZU1P20160 251 aa9.05□□□□□ -0.96
PRPF4-202ENST00000374199 C2orf66Q6UXQ4 117 aa9.05□□□□□ -0.96
PRPF4-202ENST00000374199 NUDT3O95989 172 aa9.05□□□□□ -0.96
PRPF4-202ENST00000374199 BAALCQ8WXS3 180 aa9.05□□□□□ -0.96
PRPF4-202ENST00000374199 TMEM141Q96I45 108 aa9.05□□□□□ -0.96
PRPF4-202ENST00000374199 DNAJC30Q96LL9 226 aa9.05□□□□□ -0.96
PRPF4-202ENST00000374199 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.04□□□□□ -0.96
PRPF4-202ENST00000374199 PRM2P04554 102 aa9.04□□□□□ -0.96
PRPF4-202ENST00000374199 Q6ZSN1 163 aa9.04□□□□□ -0.96
PRPF4-202ENST00000374199 WFDC9Q8NEX5 89 aa9.04□□□□□ -0.96
PRPF4-202ENST00000374199 PLNP26678 52 aa9.04□□□□□ -0.96
PRPF4-202ENST00000374199 Q6ZN92 141 aa9.04□□□□□ -0.96
PRPF4-202ENST00000374199 LINC00612Q8N6U2 182 aa9.04□□□□□ -0.96
PRPF4-202ENST00000374199 H7C1H1 209 aa9.03□□□□□ -0.96
PRPF4-202ENST00000374199 IGKCP01834 107 aa9.03□□□□□ -0.96
PRPF4-202ENST00000374199 SLC25A34Q6PIV7 304 aa9.03□□□□□ -0.96
PRPF4-202ENST00000374199 C18orf15Q96N68 181 aa9.03□□□□□ -0.96
PRPF4-202ENST00000374199 LINC01587Q99440 93 aa9.03□□□□□ -0.96
PRPF4-202ENST00000374199 HSBP1L1C9JCN9 74 aa9.03□□□□□ -0.96
PRPF4-202ENST00000374199 DPM2O94777 84 aa9.03□□□□□ -0.96
PRPF4-202ENST00000374199 PYGO1Q9Y3Y4 419 aa9.03□□□□□ -0.96
PRPF4-202ENST00000374199 F8VRH5 84 aa9.03□□□□□ -0.96
PRPF4-202ENST00000374199 I3L3M4 83 aa9.03□□□□□ -0.96
PRPF4-202ENST00000374199 SPATA3Q8NHX4 192 aa9.03□□□□□ -0.96
PRPF4-202ENST00000374199 FN1P02751 2386 aaKnown RBP9.02□□□□□ -0.97
PRPF4-202ENST00000374199 IGLV4-69A0A075B6H9 119 aa9.02□□□□□ -0.97
PRPF4-202ENST00000374199 CIDEAO60543 219 aa9.02□□□□□ -0.97
PRPF4-202ENST00000374199 HINT1P49773 126 aaPredicted RBP9.02□□□□□ -0.97
PRPF4-202ENST00000374199 HNRNPA3P51991 378 aaKnown RBP9.02□□□□□ -0.97
PRPF4-202ENST00000374199 CRYBA4P53673 196 aa9.02□□□□□ -0.97
PRPF4-202ENST00000374199 KIR2DL4Q99706 377 aa9.02□□□□□ -0.97
PRPF4-202ENST00000374199 MRPL35Q9NZE8 188 aaKnown RBP9.02□□□□□ -0.97
PRPF4-202ENST00000374199 XCL2Q9UBD3 114 aa9.02□□□□□ -0.97
PRPF4-202ENST00000374199 CYSLTR1Q9Y271 337 aa9.02□□□□□ -0.97
PRPF4-202ENST00000374199 HIVEP2P31629 2446 aa9.02□□□□□ -0.97
PRPF4-202ENST00000374199 ANK2Q01484 3957 aa9.01□□□□□ -0.97
PRPF4-202ENST00000374199 ZNF56Q15929 161 aa9.01□□□□□ -0.97
PRPF4-202ENST00000374199 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.01□□□□□ -0.97
PRPF4-202ENST00000374199 C20orf203Q8NBC4 194 aa9.01□□□□□ -0.97
PRPF4-202ENST00000374199 C16orf74Q96GX8 76 aa9.01□□□□□ -0.97
PRPF4-202ENST00000374199 C1QTNF4Q9BXJ3 329 aa9.01□□□□□ -0.97
PRPF4-202ENST00000374199 PTTG1IPP53801 180 aa9.01□□□□□ -0.97
PRPF4-202ENST00000374199 SCGB3A1Q96QR1 104 aa9.01□□□□□ -0.97
PRPF4-202ENST00000374199 TP73-AS1Q9UF72 201 aa9.01□□□□□ -0.97
PRPF4-202ENST00000374199 VWFP04275 2813 aa9.01□□□□□ -0.97
PRPF4-202ENST00000374199 CCL25O15444 150 aa9.01□□□□□ -0.97
PRPF4-202ENST00000374199 C9orf66Q5T8R8 295 aa9.01□□□□□ -0.97
PRPF4-202ENST00000374199 WFDC10AQ9H1F0 79 aa9.01□□□□□ -0.97
PRPF4-202ENST00000374199 HIGD1BQ9P298 99 aa9.01□□□□□ -0.97
PRPF4-202ENST00000374199 TENM1Q9UKZ4 2725 aa9□□□□□ -0.97
PRPF4-202ENST00000374199 TRAV4A0A0B4J268 109 aa9□□□□□ -0.97
PRPF4-202ENST00000374199 LINC00694P0DN24 101 aa9□□□□□ -0.97
PRPF4-202ENST00000374199 NEGR1Q7Z3B1 354 aa9□□□□□ -0.97
PRPF4-202ENST00000374199 FAM74A4Q5TZK3 123 aa9□□□□□ -0.97
PRPF4-202ENST00000374199 TP53TG1Q9Y2A0 90 aa9□□□□□ -0.97
PRPF4-202ENST00000374199 IGKV2D-26A0A0A0MRZ7 120 aa8.99□□□□□ -0.97
PRPF4-202ENST00000374199 CHCHD7Q9BUK0 85 aa8.99□□□□□ -0.97
PRPF4-202ENST00000374199 MTORP42345 2549 aa8.99□□□□□ -0.97
PRPF4-202ENST00000374199 NFE4Q86UQ8 179 aa8.99□□□□□ -0.97
PRPF4-202ENST00000374199 H0Y8G0 127 aa8.99□□□□□ -0.97
PRPF4-202ENST00000374199 AMELXQ99217 191 aa8.99□□□□□ -0.97
PRPF4-202ENST00000374199 CST9LQ9H4G1 147 aa8.99□□□□□ -0.97
PRPF4-202ENST00000374199 TRBV10-1A0A0K0K1A3 114 aa8.98□□□□□ -0.97
PRPF4-202ENST00000374199 F5H697 171 aa8.98□□□□□ -0.97
PRPF4-202ENST00000374199 PRSS1P07477 247 aa8.98□□□□□ -0.97
PRPF4-202ENST00000374199 MRPL16Q9NX20 251 aaKnown RBP8.98□□□□□ -0.97
PRPF4-202ENST00000374199 PRSS29PA6NIE9 313 aa8.98□□□□□ -0.97
PRPF4-202ENST00000374199 Q9UF83 564 aa8.98□□□□□ -0.97
PRPF4-202ENST00000374199 CHTOPQ9Y3Y2 248 aaKnown RBP8.97□□□□□ -0.97
PRPF4-202ENST00000374199 PF4P02776 101 aa8.97□□□□□ -0.97
PRPF4-202ENST00000374199 RPL39P62891 51 aaKnown RBP8.97□□□□□ -0.97
PRPF4-202ENST00000374199 BVES-AS1Q5T3Y7 98 aa8.97□□□□□ -0.97
PRPF4-202ENST00000374199 SORL1Q92673 2214 aa8.97□□□□□ -0.97
PRPF4-202ENST00000374199 PMVKQ15126 192 aa8.97□□□□□ -0.97
PRPF4-202ENST00000374199 FAM19A3Q7Z5A8 133 aa8.96□□□□□ -0.97
PRPF4-202ENST00000374199 TRRAPQ9Y4A5 3859 aa8.96□□□□□ -0.98
PRPF4-202ENST00000374199 E9PLD3 99 aa8.96□□□□□ -0.98
PRPF4-202ENST00000374199 SBSPONQ8IVN8 264 aa8.96□□□□□ -0.98
PRPF4-202ENST00000374199 TIMM21Q9BVV7 248 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms