RNA–Protein interactions for RNA: ENST00000373162.5

TRAPPC3-202, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-202ENST00000373162 SPANXN1Q5VSR9 72 aa11.86□□□□□ -0.51
TRAPPC3-202ENST00000373162 RBFOX3A6NFN3 312 aa11.85□□□□□ -0.51
TRAPPC3-202ENST00000373162 RAB14P61106 215 aa11.85□□□□□ -0.51
TRAPPC3-202ENST00000373162 ZNF56Q15929 161 aa11.85□□□□□ -0.51
TRAPPC3-202ENST00000373162 Q6ZSA8 131 aa11.85□□□□□ -0.51
TRAPPC3-202ENST00000373162 NTM-AS1Q6ZSK4 140 aa11.85□□□□□ -0.51
TRAPPC3-202ENST00000373162 FAM30AQ9NZY2 134 aa11.85□□□□□ -0.51
TRAPPC3-202ENST00000373162 FAM210AQ96ND0 272 aa11.84□□□□□ -0.51
TRAPPC3-202ENST00000373162 AP1S3Q96PC3 154 aa11.84□□□□□ -0.51
TRAPPC3-202ENST00000373162 KLK12Q9UKR0 248 aa11.84□□□□□ -0.51
TRAPPC3-202ENST00000373162 EPM2AB3EWF7 344 aa11.83□□□□□ -0.52
TRAPPC3-202ENST00000373162 GNG4P50150 75 aa11.83□□□□□ -0.52
TRAPPC3-202ENST00000373162 RPS20P60866 119 aaKnown RBP11.83□□□□□ -0.52
TRAPPC3-202ENST00000373162 FER1L6-AS1Q8NA97 138 aa11.83□□□□□ -0.52
TRAPPC3-202ENST00000373162 OR2D3Q8NGH3 330 aa11.83□□□□□ -0.52
TRAPPC3-202ENST00000373162 M0QY20 66 aa11.82□□□□□ -0.52
TRAPPC3-202ENST00000373162 EIF5A2Q9GZV4 153 aaKnown RBP11.82□□□□□ -0.52
TRAPPC3-202ENST00000373162 COX11Q9Y6N1 276 aa11.82□□□□□ -0.52
TRAPPC3-202ENST00000373162 LECT2O14960 151 aa11.81□□□□□ -0.52
TRAPPC3-202ENST00000373162 CTRLP40313 264 aa11.81□□□□□ -0.52
TRAPPC3-202ENST00000373162 MPV17L2Q567V2 206 aa11.81□□□□□ -0.52
TRAPPC3-202ENST00000373162 CLLU1Q5K131 121 aa11.81□□□□□ -0.52
TRAPPC3-202ENST00000373162 Q5VSD8 79 aa11.81□□□□□ -0.52
TRAPPC3-202ENST00000373162 ENHOQ6UWT2 76 aa11.81□□□□□ -0.52
TRAPPC3-202ENST00000373162 CNFNQ9BYD5 112 aa11.81□□□□□ -0.52
TRAPPC3-202ENST00000373162 MED9Q9NWA0 146 aa11.81□□□□□ -0.52
TRAPPC3-202ENST00000373162 K7EN84 100 aa11.8□□□□□ -0.52
TRAPPC3-202ENST00000373162 HAMPP81172 84 aa11.8□□□□□ -0.52
TRAPPC3-202ENST00000373162 BAALCQ8WXS3 180 aa11.8□□□□□ -0.52
TRAPPC3-202ENST00000373162 URGCP-MRPS24S4R325 110 aa11.8□□□□□ -0.52
TRAPPC3-202ENST00000373162 MYCBP2O75592 4640 aa11.79□□□□□ -0.52
TRAPPC3-202ENST00000373162 A0A087WX48 190 aa11.79□□□□□ -0.52
TRAPPC3-202ENST00000373162 P01737 135 aa11.79□□□□□ -0.52
TRAPPC3-202ENST00000373162 CACNG7P62955 275 aa11.79□□□□□ -0.52
TRAPPC3-202ENST00000373162 ELOBQ15370 118 aa11.79□□□□□ -0.52
TRAPPC3-202ENST00000373162 SUMO4Q6EEV6 95 aa11.79□□□□□ -0.52
TRAPPC3-202ENST00000373162 NUDT10Q8NFP7 164 aa11.79□□□□□ -0.52
TRAPPC3-202ENST00000373162 UBE2WQ96B02 151 aa11.79□□□□□ -0.52
TRAPPC3-202ENST00000373162 RMI2Q96E14 147 aa11.79□□□□□ -0.52
TRAPPC3-202ENST00000373162 NUDT11Q96G61 164 aa11.79□□□□□ -0.52
TRAPPC3-202ENST00000373162 SRRM2Q9UQ35 2752 aaKnown RBP11.78□□□□□ -0.52
TRAPPC3-202ENST00000373162 F2Z2F3 143 aa11.78□□□□□ -0.52
TRAPPC3-202ENST00000373162 TMEM250H0YL14 139 aa11.78□□□□□ -0.52
TRAPPC3-202ENST00000373162 NDUFS6O75380 124 aaKnown RBP11.78□□□□□ -0.52
TRAPPC3-202ENST00000373162 SSTP61278 116 aa11.78□□□□□ -0.52
TRAPPC3-202ENST00000373162 IQCJQ1A5X6 159 aa11.78□□□□□ -0.52
TRAPPC3-202ENST00000373162 WDR73Q6P4I2 378 aa11.78□□□□□ -0.52
TRAPPC3-202ENST00000373162 KRTAP26-1Q6PEX3 210 aa11.78□□□□□ -0.52
TRAPPC3-202ENST00000373162 LYZL1Q6UWQ5 148 aa11.78□□□□□ -0.52
TRAPPC3-202ENST00000373162 DAZAP1Q96EP5 407 aaKnown RBP11.78□□□□□ -0.52
TRAPPC3-202ENST00000373162 PRR34Q9NV39 138 aa11.78□□□□□ -0.52
TRAPPC3-202ENST00000373162 IGKV2D-24A0A075B6R9 120 aa11.77□□□□□ -0.53
TRAPPC3-202ENST00000373162 F5H697 171 aa11.77□□□□□ -0.53
TRAPPC3-202ENST00000373162 Q0VG73 95 aa11.77□□□□□ -0.53
TRAPPC3-202ENST00000373162 TMEM97Q5BJF2 176 aa11.77□□□□□ -0.53
TRAPPC3-202ENST00000373162 OCC1Q8TAD7 63 aa11.77□□□□□ -0.53
TRAPPC3-202ENST00000373162 BIN3Q9NQY0 253 aa11.77□□□□□ -0.53
TRAPPC3-202ENST00000373162 FLG2Q5D862 2391 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC3-202ENST00000373162 SMR3BP02814 79 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC3-202ENST00000373162 SRP19P09132 144 aaKnown RBP11.76□□□□□ -0.53
TRAPPC3-202ENST00000373162 Q8N976 141 aa11.76□□□□□ -0.53
TRAPPC3-202ENST00000373162 XKRY2A2RUG3 117 aa11.75□□□□□ -0.53
TRAPPC3-202ENST00000373162 SMIM17P0DL12 118 aa11.75□□□□□ -0.53
TRAPPC3-202ENST00000373162 NTF3P20783 257 aa11.75□□□□□ -0.53
TRAPPC3-202ENST00000373162 CEBPGP53567 150 aa11.75□□□□□ -0.53
TRAPPC3-202ENST00000373162 SRSF3P84103 164 aaKnown RBP11.75□□□□□ -0.53
TRAPPC3-202ENST00000373162 PEA15Q15121 130 aa11.75□□□□□ -0.53
TRAPPC3-202ENST00000373162 FRZBQ92765 325 aa11.75□□□□□ -0.53
TRAPPC3-202ENST00000373162 TPPP3Q9BW30 176 aa11.75□□□□□ -0.53
TRAPPC3-202ENST00000373162 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC3-202ENST00000373162 MGPP08493 103 aa11.74□□□□□ -0.53
TRAPPC3-202ENST00000373162 PKIAP61925 76 aa11.74□□□□□ -0.53
TRAPPC3-202ENST00000373162 RBX1P62877 108 aa11.74□□□□□ -0.53
TRAPPC3-202ENST00000373162 C15orf54Q8N8G6 183 aa11.74□□□□□ -0.53
TRAPPC3-202ENST00000373162 GTSF1Q8WW33 167 aa11.74□□□□□ -0.53
TRAPPC3-202ENST00000373162 RNASE7Q9H1E1 156 aaKnown RBP11.74□□□□□ -0.53
TRAPPC3-202ENST00000373162 DPH3P1Q9H4G8 78 aa11.74□□□□□ -0.53
TRAPPC3-202ENST00000373162 SMDT1Q9H4I9 107 aa11.74□□□□□ -0.53
TRAPPC3-202ENST00000373162 RPP21Q9H633 154 aaKnown RBP11.74□□□□□ -0.53
TRAPPC3-202ENST00000373162 TRGC1P0CF51 173 aa11.73□□□□□ -0.53
TRAPPC3-202ENST00000373162 RASL11AQ6T310 242 aa11.73□□□□□ -0.53
TRAPPC3-202ENST00000373162 CHCHD5Q9BSY4 110 aa11.73□□□□□ -0.53
TRAPPC3-202ENST00000373162 C9JQL5 133 aa11.72□□□□□ -0.53
TRAPPC3-202ENST00000373162 TMEM262E9PQX1 116 aa11.72□□□□□ -0.53
TRAPPC3-202ENST00000373162 H7C1H1 209 aa11.72□□□□□ -0.53
TRAPPC3-202ENST00000373162 INAFM2P0DMQ5 153 aa11.72□□□□□ -0.53
TRAPPC3-202ENST00000373162 LINC01620Q4KN68 170 aa11.72□□□□□ -0.53
TRAPPC3-202ENST00000373162 FAM231DQ6ZW35 169 aa11.72□□□□□ -0.53
TRAPPC3-202ENST00000373162 PGLYRP4Q96LB8 373 aa11.72□□□□□ -0.53
TRAPPC3-202ENST00000373162 TRBV25-1A0A075B6N4 114 aa11.71□□□□□ -0.53
TRAPPC3-202ENST00000373162 ANGP03950 147 aaKnown RBP11.71□□□□□ -0.53
TRAPPC3-202ENST00000373162 MIAQ16674 131 aa11.71□□□□□ -0.53
TRAPPC3-202ENST00000373162 KCNIP4Q6PIL6 250 aa11.71□□□□□ -0.53
TRAPPC3-202ENST00000373162 C20orf203Q8NBC4 194 aa11.71□□□□□ -0.53
TRAPPC3-202ENST00000373162 C1orf43Q9BWL3 253 aa11.71□□□□□ -0.53
TRAPPC3-202ENST00000373162 NIT2Q9NQR4 276 aa11.71□□□□□ -0.53
TRAPPC3-202ENST00000373162 IGHV1-24A0A0C4DH33 117 aa11.7□□□□□ -0.54
TRAPPC3-202ENST00000373162 GAGE6Q13070 117 aa11.7□□□□□ -0.54
TRAPPC3-202ENST00000373162 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.7□□□□□ -0.54
TRAPPC3-202ENST00000373162 SMIM7Q9BQ49 75 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms