RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 COX8CQ7Z4L0 72 aa7.53□□□□□ -1.2
PRPF38B-203ENST00000370025 TEN1Q86WV5 123 aa7.53□□□□□ -1.2
PRPF38B-203ENST00000370025 PRAC2D3DTV9 90 aa7.53□□□□□ -1.2
PRPF38B-203ENST00000370025 Q8N2B8 174 aa7.53□□□□□ -1.2
PRPF38B-203ENST00000370025 CITED1Q99966 193 aa7.53□□□□□ -1.2
PRPF38B-203ENST00000370025 YAE1D1Q9NRH1 226 aa7.53□□□□□ -1.2
PRPF38B-203ENST00000370025 NDUFV3P56181 108 aaKnown RBP7.52□□□□□ -1.21
PRPF38B-203ENST00000370025 Q1RN00 199 aa7.52□□□□□ -1.21
PRPF38B-203ENST00000370025 PRADC1Q9BSG0 188 aa7.52□□□□□ -1.21
PRPF38B-203ENST00000370025 TRBV7-3A0A075B6L6 115 aa7.52□□□□□ -1.21
PRPF38B-203ENST00000370025 ATP5LO75964 103 aa7.52□□□□□ -1.21
PRPF38B-203ENST00000370025 LGALS1P09382 135 aaKnown RBP7.52□□□□□ -1.21
PRPF38B-203ENST00000370025 RNF185Q96GF1 192 aa7.52□□□□□ -1.21
PRPF38B-203ENST00000370025 UBE2E2Q96LR5 201 aa7.52□□□□□ -1.21
PRPF38B-203ENST00000370025 ITPR3Q14573 2671 aa7.52□□□□□ -1.21
PRPF38B-203ENST00000370025 HIVEP2P31629 2446 aa7.52□□□□□ -1.21
PRPF38B-203ENST00000370025 U3KQK5 164 aa7.51□□□□□ -1.21
PRPF38B-203ENST00000370025 ZFHX3Q15911 3703 aa7.51□□□□□ -1.21
PRPF38B-203ENST00000370025 MEIG1Q5JSS6 88 aa7.51□□□□□ -1.21
PRPF38B-203ENST00000370025 RNF152Q8N8N0 203 aa7.51□□□□□ -1.21
PRPF38B-203ENST00000370025 NTN5Q8WTR8 489 aaPredicted RBP7.51□□□□□ -1.21
PRPF38B-203ENST00000370025 SCGB3A1Q96QR1 104 aa7.51□□□□□ -1.21
PRPF38B-203ENST00000370025 AGPAT4-IT1Q9H0P7 198 aa7.51□□□□□ -1.21
PRPF38B-203ENST00000370025 NXT2Q9NPJ8 142 aaKnown RBP7.51□□□□□ -1.21
PRPF38B-203ENST00000370025 ACANP16112 2415 aa7.51□□□□□ -1.21
PRPF38B-203ENST00000370025 IGHV3-64A0A075B6Q5 118 aa7.5□□□□□ -1.21
PRPF38B-203ENST00000370025 FABP5P3A8MUU1 101 aa7.5□□□□□ -1.21
PRPF38B-203ENST00000370025 ZMAT4Q9H898 229 aa7.5□□□□□ -1.21
PRPF38B-203ENST00000370025 C9orf47Q6ZRZ4 202 aa7.5□□□□□ -1.21
PRPF38B-203ENST00000370025 IFITM1P13164 125 aa7.5□□□□□ -1.21
PRPF38B-203ENST00000370025 LAGE3Q14657 143 aa7.5□□□□□ -1.21
PRPF38B-203ENST00000370025 F6UB75 175 aa7.49□□□□□ -1.21
PRPF38B-203ENST00000370025 OVOL1O14753 267 aa7.49□□□□□ -1.21
PRPF38B-203ENST00000370025 PPDPFQ9H3Y8 114 aa7.49□□□□□ -1.21
PRPF38B-203ENST00000370025 A0A087WX48 190 aa7.49□□□□□ -1.21
PRPF38B-203ENST00000370025 DNAJC9-AS1A6NH13 148 aa7.49□□□□□ -1.21
PRPF38B-203ENST00000370025 KRTAP1-1Q07627 177 aa7.49□□□□□ -1.21
PRPF38B-203ENST00000370025 MRPL23Q16540 153 aaKnown RBP7.49□□□□□ -1.21
PRPF38B-203ENST00000370025 OR10J6PQ8NGY7 276 aa7.49□□□□□ -1.21
PRPF38B-203ENST00000370025 LINC00477Q96M19 166 aa7.49□□□□□ -1.21
PRPF38B-203ENST00000370025 TEX49A0A1B0GTD5 131 aa7.49□□□□□ -1.21
PRPF38B-203ENST00000370025 A6NJY4 79 aa7.49□□□□□ -1.21
PRPF38B-203ENST00000370025 SLC25A20O43772 301 aa7.49□□□□□ -1.21
PRPF38B-203ENST00000370025 C20orf173Q96LM9 149 aa7.49□□□□□ -1.21
PRPF38B-203ENST00000370025 CHCHD5Q9BSY4 110 aa7.49□□□□□ -1.21
PRPF38B-203ENST00000370025 IGHV4OR15-8A0A075B7B6 117 aa7.48□□□□□ -1.21
PRPF38B-203ENST00000370025 A0A087WW49 117 aa7.48□□□□□ -1.21
PRPF38B-203ENST00000370025 SOCS3O14543 225 aa7.48□□□□□ -1.21
PRPF38B-203ENST00000370025 RNASE4P34096 147 aaKnown RBP7.48□□□□□ -1.21
PRPF38B-203ENST00000370025 PHLDA3Q9Y5J5 127 aa7.48□□□□□ -1.21
PRPF38B-203ENST00000370025 LGALS9O00182 355 aa7.48□□□□□ -1.21
PRPF38B-203ENST00000370025 SYNJ2BPP57105 145 aa7.48□□□□□ -1.21
PRPF38B-203ENST00000370025 SRSF2Q01130 221 aaKnown RBP7.48□□□□□ -1.21
PRPF38B-203ENST00000370025 C14orf178Q8N769 122 aaPredicted RBP7.48□□□□□ -1.21
PRPF38B-203ENST00000370025 LENEPQ9Y5L5 61 aa7.48□□□□□ -1.21
PRPF38B-203ENST00000370025 FLNAP21333 2647 aaKnown RBP7.48□□□□□ -1.21
PRPF38B-203ENST00000370025 HOXD3P31249 432 aaPredicted RBP7.48□□□□□ -1.21
PRPF38B-203ENST00000370025 F8VRH5 84 aa7.47□□□□□ -1.21
PRPF38B-203ENST00000370025 H7C1H1 209 aa7.47□□□□□ -1.21
PRPF38B-203ENST00000370025 Q6ZSV7 163 aa7.47□□□□□ -1.21
PRPF38B-203ENST00000370025 C15orf53Q8NAA6 179 aa7.47□□□□□ -1.21
PRPF38B-203ENST00000370025 PLNP26678 52 aa7.47□□□□□ -1.21
PRPF38B-203ENST00000370025 TAL2Q16559 108 aa7.47□□□□□ -1.21
PRPF38B-203ENST00000370025 Q8N8P6 123 aa7.47□□□□□ -1.21
PRPF38B-203ENST00000370025 TMEM170BQ5T4T1 132 aa7.47□□□□□ -1.21
PRPF38B-203ENST00000370025 FAM110AQ9BQ89 295 aa7.47□□□□□ -1.21
PRPF38B-203ENST00000370025 ZNF256Q9Y2P7 627 aaPredicted RBP7.47□□□□□ -1.21
PRPF38B-203ENST00000370025 PDZD2O15018 2839 aa7.46□□□□□ -1.21
PRPF38B-203ENST00000370025 MXRA5Q9NR99 2828 aa7.46□□□□□ -1.21
PRPF38B-203ENST00000370025 EDN2P20800 178 aa7.46□□□□□ -1.21
PRPF38B-203ENST00000370025 M0QXV9 152 aa7.46□□□□□ -1.22
PRPF38B-203ENST00000370025 RHODO00212 210 aa7.46□□□□□ -1.22
PRPF38B-203ENST00000370025 NDUFA11Q86Y39 141 aa7.46□□□□□ -1.22
PRPF38B-203ENST00000370025 ATP6V0E2Q8NHE4 81 aa7.46□□□□□ -1.22
PRPF38B-203ENST00000370025 NBPF19A0A087WUL8 3843 aa7.46□□□□□ -1.22
PRPF38B-203ENST00000370025 LINC01559Q495D7 138 aa7.46□□□□□ -1.22
PRPF38B-203ENST00000370025 RPL39LQ96EH5 51 aaKnown RBP7.46□□□□□ -1.22
PRPF38B-203ENST00000370025 A0A087WWL8 130 aa7.45□□□□□ -1.22
PRPF38B-203ENST00000370025 TMEM262E9PQX1 116 aa7.45□□□□□ -1.22
PRPF38B-203ENST00000370025 LINC01619G3V211 115 aa7.45□□□□□ -1.22
PRPF38B-203ENST00000370025 NPC2P61916 151 aa7.45□□□□□ -1.22
PRPF38B-203ENST00000370025 HIST2H2BDQ6DRA6 164 aa7.45□□□□□ -1.22
PRPF38B-203ENST00000370025 C4orf3Q8WVX3 66 aa7.45□□□□□ -1.22
PRPF38B-203ENST00000370025 ESM1Q9NQ30 184 aa7.45□□□□□ -1.22
PRPF38B-203ENST00000370025 IGHV3-73A0A0B4J1V6 119 aa7.45□□□□□ -1.22
PRPF38B-203ENST00000370025 TRAV2A0A0B4J234 112 aa7.45□□□□□ -1.22
PRPF38B-203ENST00000370025 ZNF56Q15929 161 aa7.45□□□□□ -1.22
PRPF38B-203ENST00000370025 GATD1Q8NB37 220 aa7.45□□□□□ -1.22
PRPF38B-203ENST00000370025 UNC79Q9P2D8 2635 aa7.45□□□□□ -1.22
PRPF38B-203ENST00000370025 DCANP1Q8TF63 244 aa7.45□□□□□ -1.22
PRPF38B-203ENST00000370025 CFC1BP0CG36 223 aa7.44□□□□□ -1.22
PRPF38B-203ENST00000370025 CFC1P0CG37 223 aa7.44□□□□□ -1.22
PRPF38B-203ENST00000370025 C18orf65Q6ZTR6 163 aa7.44□□□□□ -1.22
PRPF38B-203ENST00000370025 Q8N1Y9 231 aa7.44□□□□□ -1.22
PRPF38B-203ENST00000370025 ITPR2Q14571 2701 aa7.44□□□□□ -1.22
PRPF38B-203ENST00000370025 LOC107984640A0A0U1RRK4 108 aa7.44□□□□□ -1.22
PRPF38B-203ENST00000370025 IGLC6P0CF74 106 aa7.44□□□□□ -1.22
PRPF38B-203ENST00000370025 SNRPD3P62318 126 aaKnown RBP7.44□□□□□ -1.22
PRPF38B-203ENST00000370025 DEFB136Q30KP8 78 aa7.44□□□□□ -1.22
PRPF38B-203ENST00000370025 TRAV8-4A0A0B4J246 113 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms