RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 SMIM17P0DL12 118 aa10.12□□□□□ -0.79
HMGCS2-201ENST00000369406 LAMTOR2Q9Y2Q5 125 aa10.12□□□□□ -0.79
HMGCS2-201ENST00000369406 F5H697 171 aa10.12□□□□□ -0.79
HMGCS2-201ENST00000369406 M0QY20 66 aa10.12□□□□□ -0.79
HMGCS2-201ENST00000369406 ZNF56Q15929 161 aa10.12□□□□□ -0.79
HMGCS2-201ENST00000369406 C1QTNF4Q9BXJ3 329 aa10.12□□□□□ -0.79
HMGCS2-201ENST00000369406 X6R8D5 127 aa10.12□□□□□ -0.79
HMGCS2-201ENST00000369406 LINC01546A6NGU7 62 aa10.11□□□□□ -0.79
HMGCS2-201ENST00000369406 C3orf79P0CE67 100 aa10.11□□□□□ -0.79
HMGCS2-201ENST00000369406 IGHV4-30-4P0DP06 118 aa10.11□□□□□ -0.79
HMGCS2-201ENST00000369406 NOP10Q9NPE3 64 aaKnown RBP10.11□□□□□ -0.79
HMGCS2-201ENST00000369406 PRSS47A8MTI9 375 aa10.11□□□□□ -0.79
HMGCS2-201ENST00000369406 KRTDAPP60985 99 aa10.11□□□□□ -0.79
HMGCS2-201ENST00000369406 EGFEM1PQ0D2K5 195 aa10.11□□□□□ -0.79
HMGCS2-201ENST00000369406 COL5A1-AS1Q5SY13 56 aa10.11□□□□□ -0.79
HMGCS2-201ENST00000369406 Q8N8P6 123 aa10.11□□□□□ -0.79
HMGCS2-201ENST00000369406 DNHD1Q96M86 4753 aa10.1□□□□□ -0.79
HMGCS2-201ENST00000369406 TRGV1A0A0A0MS02 117 aa10.1□□□□□ -0.79
HMGCS2-201ENST00000369406 DEFB135Q30KP9 77 aa10.1□□□□□ -0.79
HMGCS2-201ENST00000369406 PTH2Q96A98 100 aa10.1□□□□□ -0.79
HMGCS2-201ENST00000369406 SPXQ9BT56 116 aa10.1□□□□□ -0.79
HMGCS2-201ENST00000369406 SMIM2Q9BVW6 85 aa10.1□□□□□ -0.79
HMGCS2-201ENST00000369406 PAM16Q9Y3D7 125 aa10.1□□□□□ -0.79
HMGCS2-201ENST00000369406 SUMO2P61956 95 aaKnown RBP10.09□□□□□ -0.79
HMGCS2-201ENST00000369406 C20orf202A1L168 122 aa10.09□□□□□ -0.79
HMGCS2-201ENST00000369406 CCL25O15444 150 aa10.09□□□□□ -0.79
HMGCS2-201ENST00000369406 RS1O15537 224 aa10.08□□□□□ -0.8
HMGCS2-201ENST00000369406 PTTG1IPP53801 180 aa10.08□□□□□ -0.8
HMGCS2-201ENST00000369406 EMP1P54849 157 aa10.08□□□□□ -0.8
HMGCS2-201ENST00000369406 RRN3P1Q2M238 152 aa10.08□□□□□ -0.8
HMGCS2-201ENST00000369406 TEX43Q6ZNM6 134 aa10.08□□□□□ -0.8
HMGCS2-201ENST00000369406 C16orf74Q96GX8 76 aa10.08□□□□□ -0.8
HMGCS2-201ENST00000369406 ZNF479Q96JC4 524 aa10.08□□□□□ -0.8
HMGCS2-201ENST00000369406 A8MWV9 139 aa10.07□□□□□ -0.8
HMGCS2-201ENST00000369406 IGHV3-53P01767 116 aa10.07□□□□□ -0.8
HMGCS2-201ENST00000369406 NXT2Q9NPJ8 142 aaKnown RBP10.07□□□□□ -0.8
HMGCS2-201ENST00000369406 DAZ2Q13117 558 aaKnown RBP10.07□□□□□ -0.8
HMGCS2-201ENST00000369406 PIK3CD-AS1Q5SR53 167 aa10.07□□□□□ -0.8
HMGCS2-201ENST00000369406 TMEM70Q9BUB7 260 aa10.07□□□□□ -0.8
HMGCS2-201ENST00000369406 LEPROTL1O95214 131 aa10.06□□□□□ -0.8
HMGCS2-201ENST00000369406 POLR2KP53803 58 aaKnown RBP10.06□□□□□ -0.8
HMGCS2-201ENST00000369406 C20orf78Q9BR46 151 aa10.06□□□□□ -0.8
HMGCS2-201ENST00000369406 DEFB4AO15263 64 aa10.06□□□□□ -0.8
HMGCS2-201ENST00000369406 RNF151Q2KHN1 245 aa10.06□□□□□ -0.8
HMGCS2-201ENST00000369406 VAMP8Q9BV40 100 aa10.06□□□□□ -0.8
HMGCS2-201ENST00000369406 GAGE12BA1L429 117 aa10.05□□□□□ -0.8
HMGCS2-201ENST00000369406 GAGE7O76087 117 aa10.05□□□□□ -0.8
HMGCS2-201ENST00000369406 PRB2P02812 416 aaPredicted RBP10.05□□□□□ -0.8
HMGCS2-201ENST00000369406 GAGE12FP0CL80 117 aa10.05□□□□□ -0.8
HMGCS2-201ENST00000369406 GAGE12GP0CL81 117 aa10.05□□□□□ -0.8
HMGCS2-201ENST00000369406 GAGE12IP0CL82 117 aa10.05□□□□□ -0.8
HMGCS2-201ENST00000369406 STPG4Q8N801 248 aa10.05□□□□□ -0.8
HMGCS2-201ENST00000369406 KIR2DL5BQ8NHK3 375 aa10.05□□□□□ -0.8
HMGCS2-201ENST00000369406 OVOL2Q9BRP0 275 aa10.05□□□□□ -0.8
HMGCS2-201ENST00000369406 SDHAF1A6NFY7 115 aa10.05□□□□□ -0.8
HMGCS2-201ENST00000369406 HBDP02042 147 aa10.05□□□□□ -0.8
HMGCS2-201ENST00000369406 SAMD5Q5TGI4 173 aa10.05□□□□□ -0.8
HMGCS2-201ENST00000369406 ST20Q9HBF5 79 aa10.05□□□□□ -0.8
HMGCS2-201ENST00000369406 TRBV6-5A0A0K0K1A5 114 aa10.04□□□□□ -0.8
HMGCS2-201ENST00000369406 K7EP13 123 aa10.04□□□□□ -0.8
HMGCS2-201ENST00000369406 HUWE1Q7Z6Z7 4374 aaKnown RBP10.04□□□□□ -0.8
HMGCS2-201ENST00000369406 LAGE3Q14657 143 aa10.04□□□□□ -0.8
HMGCS2-201ENST00000369406 C18orf15Q96N68 181 aa10.04□□□□□ -0.8
HMGCS2-201ENST00000369406 FCER1GP30273 86 aa10.03□□□□□ -0.8
HMGCS2-201ENST00000369406 APOC4P55056 127 aa10.03□□□□□ -0.8
HMGCS2-201ENST00000369406 OR4C5Q8NGB2 326 aa10.03□□□□□ -0.8
HMGCS2-201ENST00000369406 ORAOV1Q8WV07 137 aa10.03□□□□□ -0.8
HMGCS2-201ENST00000369406 RETNQ9HD89 108 aa10.03□□□□□ -0.8
HMGCS2-201ENST00000369406 H0Y8G0 127 aa10.03□□□□□ -0.8
HMGCS2-201ENST00000369406 LGALS9BQ3B8N2 356 aa10.03□□□□□ -0.8
HMGCS2-201ENST00000369406 Q6ZVH6 145 aa10.03□□□□□ -0.8
HMGCS2-201ENST00000369406 ATOH7Q8N100 152 aa10.03□□□□□ -0.8
HMGCS2-201ENST00000369406 NEXN-AS1Q8NBZ9 246 aa10.03□□□□□ -0.8
HMGCS2-201ENST00000369406 PMCHL2Q9BQD1 86 aa10.03□□□□□ -0.8
HMGCS2-201ENST00000369406 EDA2RQ9HAV5 297 aa10.03□□□□□ -0.8
HMGCS2-201ENST00000369406 SYS1-DBNDD2H3BUS1 97 aa10.02□□□□□ -0.81
HMGCS2-201ENST00000369406 OR11H2Q8NH07 326 aa10.02□□□□□ -0.81
HMGCS2-201ENST00000369406 TRBV27A0A0K0K1C4 114 aa10.02□□□□□ -0.81
HMGCS2-201ENST00000369406 MAJINQ3KP22 176 aa10.02□□□□□ -0.81
HMGCS2-201ENST00000369406 TRAV4A0A0B4J268 109 aa10.01□□□□□ -0.81
HMGCS2-201ENST00000369406 IGHV4-28A0A0C4DH34 117 aa10.01□□□□□ -0.81
HMGCS2-201ENST00000369406 RPL32P62910 135 aaKnown RBP10.01□□□□□ -0.81
HMGCS2-201ENST00000369406 UBE2V1Q13404 147 aa10.01□□□□□ -0.81
HMGCS2-201ENST00000369406 COL7A1Q02388 2944 aa10.01□□□□□ -0.81
HMGCS2-201ENST00000369406 RHODO00212 210 aa10.01□□□□□ -0.81
HMGCS2-201ENST00000369406 TSHBP01222 138 aa10.01□□□□□ -0.81
HMGCS2-201ENST00000369406 RIPPLY3P57055 190 aa10.01□□□□□ -0.81
HMGCS2-201ENST00000369406 ZFP2Q6ZN57 461 aa10.01□□□□□ -0.81
HMGCS2-201ENST00000369406 Q8NAQ8 132 aa10.01□□□□□ -0.81
HMGCS2-201ENST00000369406 PPP1R17O96001 155 aa10□□□□□ -0.81
HMGCS2-201ENST00000369406 LINC00612Q8N6U2 182 aa10□□□□□ -0.81
HMGCS2-201ENST00000369406 RNF183Q96D59 192 aa10□□□□□ -0.81
HMGCS2-201ENST00000369406 NUDT3O95989 172 aa9.99□□□□□ -0.81
HMGCS2-201ENST00000369406 DEFB130BP0DP73 79 aa9.99□□□□□ -0.81
HMGCS2-201ENST00000369406 DEFB130AP0DP74 79 aa9.99□□□□□ -0.81
HMGCS2-201ENST00000369406 HSPB8Q9UJY1 196 aa9.99□□□□□ -0.81
HMGCS2-201ENST00000369406 CELA1Q9UNI1 258 aa9.99□□□□□ -0.81
HMGCS2-201ENST00000369406 TRGV2A0A075B6R0 118 aa9.99□□□□□ -0.81
HMGCS2-201ENST00000369406 LOC100131303A0A0U1RQF7 123 aa9.99□□□□□ -0.81
HMGCS2-201ENST00000369406 VCYO14598 125 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms