RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 LINC01587Q99440 93 aa6.31□□□□□ -1.4
SNX27-201ENST00000368838 TPPP3Q9BW30 176 aa6.31□□□□□ -1.4
SNX27-201ENST00000368838 MDFICQ9P1T7 246 aa6.31□□□□□ -1.4
SNX27-201ENST00000368838 LINC01549A6NIU2 74 aa6.3□□□□□ -1.4
SNX27-201ENST00000368838 SPRY2O43597 315 aa6.3□□□□□ -1.4
SNX27-201ENST00000368838 CRYGDP07320 174 aa6.3□□□□□ -1.4
SNX27-201ENST00000368838 LINC00614P0C842 121 aa6.3□□□□□ -1.4
SNX27-201ENST00000368838 UFSP1Q6NVU6 142 aa6.3□□□□□ -1.4
SNX27-201ENST00000368838 BAGE3Q86Y29 109 aa6.3□□□□□ -1.4
SNX27-201ENST00000368838 C16orf74Q96GX8 76 aa6.3□□□□□ -1.4
SNX27-201ENST00000368838 PRELID3AQ96N28 172 aa6.3□□□□□ -1.4
SNX27-201ENST00000368838 HIST1H2BLQ99880 126 aa6.3□□□□□ -1.4
SNX27-201ENST00000368838 NXT2Q9NPJ8 142 aaKnown RBP6.3□□□□□ -1.4
SNX27-201ENST00000368838 MUC4Q99102 2169 aa6.3□□□□□ -1.4
SNX27-201ENST00000368838 IFITM10A6NMD0 228 aa6.29□□□□□ -1.4
SNX27-201ENST00000368838 D6R8Y8 96 aa6.29□□□□□ -1.4
SNX27-201ENST00000368838 SERF1AO75920 110 aa6.29□□□□□ -1.4
SNX27-201ENST00000368838 S100A2P29034 98 aa6.29□□□□□ -1.4
SNX27-201ENST00000368838 KIAA1644Q3SXP7 199 aa6.29□□□□□ -1.4
SNX27-201ENST00000368838 ZNF876PQ49A33 203 aa6.29□□□□□ -1.4
SNX27-201ENST00000368838 LINC00612Q8N6U2 182 aa6.29□□□□□ -1.4
SNX27-201ENST00000368838 NRACQ8N912 160 aa6.29□□□□□ -1.4
SNX27-201ENST00000368838 URB1-AS1Q96HZ7 61 aa6.29□□□□□ -1.4
SNX27-201ENST00000368838 KRTAP4-8Q9BYQ9 185 aa6.29□□□□□ -1.4
SNX27-201ENST00000368838 XCL2Q9UBD3 114 aa6.29□□□□□ -1.4
SNX27-201ENST00000368838 TP53TG1Q9Y2A0 90 aa6.29□□□□□ -1.4
SNX27-201ENST00000368838 IGLV2-18A0A075B6J9 118 aa6.28□□□□□ -1.4
SNX27-201ENST00000368838 PLAC8L1A1L4L8 177 aa6.28□□□□□ -1.4
SNX27-201ENST00000368838 H7C1H1 209 aa6.28□□□□□ -1.4
SNX27-201ENST00000368838 TCAPO15273 167 aa6.28□□□□□ -1.4
SNX27-201ENST00000368838 RS1O15537 224 aa6.28□□□□□ -1.4
SNX27-201ENST00000368838 SMIM17P0DL12 118 aa6.28□□□□□ -1.4
SNX27-201ENST00000368838 RRN3P1Q2M238 152 aa6.28□□□□□ -1.4
SNX27-201ENST00000368838 NIT1Q86X76 327 aa6.28□□□□□ -1.4
SNX27-201ENST00000368838 TMEM208Q9BTX3 173 aa6.28□□□□□ -1.4
SNX27-201ENST00000368838 A0A0J9YWU9 116 aa6.27□□□□□ -1.41
SNX27-201ENST00000368838 HSBP1O75506 76 aa6.27□□□□□ -1.41
SNX27-201ENST00000368838 LY6G6CO95867 125 aa6.27□□□□□ -1.41
SNX27-201ENST00000368838 NPYP01303 97 aa6.27□□□□□ -1.41
SNX27-201ENST00000368838 SMIM6P0DI80 62 aa6.27□□□□□ -1.41
SNX27-201ENST00000368838 RPL35AP18077 110 aaKnown RBP6.27□□□□□ -1.41
SNX27-201ENST00000368838 G0S2P27469 103 aa6.27□□□□□ -1.41
SNX27-201ENST00000368838 POLR2KP53803 58 aaKnown RBP6.27□□□□□ -1.41
SNX27-201ENST00000368838 FXYD7P58549 80 aa6.27□□□□□ -1.41
SNX27-201ENST00000368838 RNF151Q2KHN1 245 aa6.27□□□□□ -1.41
SNX27-201ENST00000368838 DEFB135Q30KP9 77 aa6.27□□□□□ -1.41
SNX27-201ENST00000368838 GAGE13Q4V321 117 aa6.27□□□□□ -1.41
SNX27-201ENST00000368838 C14orf178Q8N769 122 aaPredicted RBP6.27□□□□□ -1.41
SNX27-201ENST00000368838 Q8N8P6 123 aa6.27□□□□□ -1.41
SNX27-201ENST00000368838 MAP1LC3AQ9H492 121 aa6.27□□□□□ -1.41
SNX27-201ENST00000368838 DNAH10Q8IVF4 4471 aa6.27□□□□□ -1.41
SNX27-201ENST00000368838 KMT2AQ03164 3969 aa6.27□□□□□ -1.41
SNX27-201ENST00000368838 TRBV27A0A0K0K1C4 114 aa6.26□□□□□ -1.41
SNX27-201ENST00000368838 M0QY20 66 aa6.26□□□□□ -1.41
SNX27-201ENST00000368838 NUPR1O60356 82 aa6.26□□□□□ -1.41
SNX27-201ENST00000368838 IGHV3-53P01767 116 aa6.26□□□□□ -1.41
SNX27-201ENST00000368838 AKR1D1P51857 326 aa6.26□□□□□ -1.41
SNX27-201ENST00000368838 SUMO2P61956 95 aaKnown RBP6.26□□□□□ -1.41
SNX27-201ENST00000368838 SPATA12Q7Z6I5 190 aa6.26□□□□□ -1.41
SNX27-201ENST00000368838 DNAJC30Q96LL9 226 aa6.26□□□□□ -1.41
SNX27-201ENST00000368838 TRAV4A0A0B4J268 109 aa6.25□□□□□ -1.41
SNX27-201ENST00000368838 MUC21A0A0G2JKD1 596 aa6.25□□□□□ -1.41
SNX27-201ENST00000368838 TRBV10-1A0A0K0K1A3 114 aa6.25□□□□□ -1.41
SNX27-201ENST00000368838 MUC21A0A140T8X8 626 aa6.25□□□□□ -1.41
SNX27-201ENST00000368838 MIFP14174 115 aa6.25□□□□□ -1.41
SNX27-201ENST00000368838 JOSD1Q15040 202 aaPredicted RBP6.25□□□□□ -1.41
SNX27-201ENST00000368838 CFAP126Q5VTH2 177 aa6.25□□□□□ -1.41
SNX27-201ENST00000368838 PRSS3P2Q8NHM4 247 aa6.25□□□□□ -1.41
SNX27-201ENST00000368838 LINC00476Q8WZB0 136 aa6.25□□□□□ -1.41
SNX27-201ENST00000368838 RNF183Q96D59 192 aa6.25□□□□□ -1.41
SNX27-201ENST00000368838 SMIM2Q9BVW6 85 aa6.25□□□□□ -1.41
SNX27-201ENST00000368838 NIT2Q9NQR4 276 aa6.25□□□□□ -1.41
SNX27-201ENST00000368838 TIMM8BQ9Y5J9 83 aaPredicted RBP6.25□□□□□ -1.41
SNX27-201ENST00000368838 TEX48A0A1B0GUV7 120 aa6.25□□□□□ -1.41
SNX27-201ENST00000368838 LYRM9A8MSI8 78 aa6.25□□□□□ -1.41
SNX27-201ENST00000368838 AZU1P20160 251 aa6.25□□□□□ -1.41
SNX27-201ENST00000368838 IQCJQ1A5X6 159 aa6.25□□□□□ -1.41
SNX27-201ENST00000368838 FA2HQ7L5A8 372 aa6.25□□□□□ -1.41
SNX27-201ENST00000368838 TRBV6-4A0A1B0GX49 114 aa6.24□□□□□ -1.41
SNX27-201ENST00000368838 VCYO14598 125 aa6.24□□□□□ -1.41
SNX27-201ENST00000368838 NPSP0C0P6 89 aa6.24□□□□□ -1.41
SNX27-201ENST00000368838 FABP4P15090 132 aa6.24□□□□□ -1.41
SNX27-201ENST00000368838 FCER1GP30273 86 aa6.24□□□□□ -1.41
SNX27-201ENST00000368838 IFI27P40305 119 aaPredicted RBP6.24□□□□□ -1.41
SNX27-201ENST00000368838 AMTP48728 403 aa6.24□□□□□ -1.41
SNX27-201ENST00000368838 ORMDL2Q53FV1 153 aa6.24□□□□□ -1.41
SNX27-201ENST00000368838 SUMO4Q6EEV6 95 aa6.24□□□□□ -1.41
SNX27-201ENST00000368838 LINC00518Q8N0U6 118 aa6.24□□□□□ -1.41
SNX27-201ENST00000368838 OR10D4PQ8NGN7 298 aa6.24□□□□□ -1.41
SNX27-201ENST00000368838 TMEM70Q9BUB7 260 aa6.24□□□□□ -1.41
SNX27-201ENST00000368838 SAMD10Q9BYL1 202 aa6.24□□□□□ -1.41
SNX27-201ENST00000368838 VPS13DQ5THJ4 4388 aa6.23□□□□□ -1.41
SNX27-201ENST00000368838 A0A096LNJ9 63 aa6.23□□□□□ -1.41
SNX27-201ENST00000368838 IGHV1-24A0A0C4DH33 117 aa6.23□□□□□ -1.41
SNX27-201ENST00000368838 HBDP02042 147 aa6.23□□□□□ -1.41
SNX27-201ENST00000368838 PDZD11Q5EBL8 140 aa6.23□□□□□ -1.41
SNX27-201ENST00000368838 ST20Q9HBF5 79 aa6.23□□□□□ -1.41
SNX27-201ENST00000368838 FAM30AQ9NZY2 134 aa6.23□□□□□ -1.41
SNX27-201ENST00000368838 HSPB8Q9UJY1 196 aa6.23□□□□□ -1.41
SNX27-201ENST00000368838 DNAH6Q9C0G6 4158 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms