RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 NXPH4O95158 308 aa6.35□□□□□ -1.39
TPM3-213ENST00000368545 LINC00467Q9BRT7 94 aa6.35□□□□□ -1.39
TPM3-213ENST00000368545 GNRH2O43555 120 aa6.34□□□□□ -1.39
TPM3-213ENST00000368545 PPBPP02775 128 aa6.34□□□□□ -1.39
TPM3-213ENST00000368545 PDZD11Q5EBL8 140 aa6.34□□□□□ -1.39
TPM3-213ENST00000368545 GTSCR1Q86UQ5 136 aa6.34□□□□□ -1.39
TPM3-213ENST00000368545 AMN1Q8IY45 258 aa6.34□□□□□ -1.39
TPM3-213ENST00000368545 ORMDL3Q8N138 153 aa6.34□□□□□ -1.39
TPM3-213ENST00000368545 TP53TG3Q9ULZ0 132 aa6.34□□□□□ -1.39
TPM3-213ENST00000368545 TIMM8BQ9Y5J9 83 aaPredicted RBP6.34□□□□□ -1.39
TPM3-213ENST00000368545 IGHV3-16A0A0C4DH30 117 aa6.34□□□□□ -1.4
TPM3-213ENST00000368545 A0A1B0GV90 55 aa6.34□□□□□ -1.4
TPM3-213ENST00000368545 IFITM10A6NMD0 228 aa6.34□□□□□ -1.4
TPM3-213ENST00000368545 SERF1AO75920 110 aa6.34□□□□□ -1.4
TPM3-213ENST00000368545 FABP4P15090 132 aa6.34□□□□□ -1.4
TPM3-213ENST00000368545 FXYD7P58549 80 aa6.34□□□□□ -1.4
TPM3-213ENST00000368545 TMEM256Q8N2U0 113 aa6.34□□□□□ -1.4
TPM3-213ENST00000368545 PACRGQ96M98 296 aaPredicted RBP6.34□□□□□ -1.4
TPM3-213ENST00000368545 C9orf85Q96MD7 179 aa6.34□□□□□ -1.4
TPM3-213ENST00000368545 AP1S3Q96PC3 154 aa6.34□□□□□ -1.4
TPM3-213ENST00000368545 HIST1H2BLQ99880 126 aa6.34□□□□□ -1.4
TPM3-213ENST00000368545 LAMTOR2Q9Y2Q5 125 aa6.34□□□□□ -1.4
TPM3-213ENST00000368545 D6R8Y8 96 aa6.33□□□□□ -1.4
TPM3-213ENST00000368545 M0R381 172 aa6.33□□□□□ -1.4
TPM3-213ENST00000368545 RAB4AP20338 218 aa6.33□□□□□ -1.4
TPM3-213ENST00000368545 MRPL51Q4U2R6 128 aaKnown RBP6.33□□□□□ -1.4
TPM3-213ENST00000368545 IGLV9-49A0A0B4J1Y8 123 aa6.32□□□□□ -1.4
TPM3-213ENST00000368545 RBMY1A1P0DJD3 496 aaKnown RBP6.32□□□□□ -1.4
TPM3-213ENST00000368545 RBMY1CP0DJD4 496 aa6.32□□□□□ -1.4
TPM3-213ENST00000368545 CKS2P33552 79 aa6.32□□□□□ -1.4
TPM3-213ENST00000368545 RBMY1FQ15415 496 aaKnown RBP6.32□□□□□ -1.4
TPM3-213ENST00000368545 MORN3Q6PF18 240 aaPredicted RBP6.32□□□□□ -1.4
TPM3-213ENST00000368545 CHCHD1Q96BP2 118 aaKnown RBP6.32□□□□□ -1.4
TPM3-213ENST00000368545 RNF185Q96GF1 192 aa6.32□□□□□ -1.4
TPM3-213ENST00000368545 RCHY1Q96PM5 261 aa6.32□□□□□ -1.4
TPM3-213ENST00000368545 C1QTNF4Q9BXJ3 329 aa6.32□□□□□ -1.4
TPM3-213ENST00000368545 DPH3P1Q9H4G8 78 aa6.32□□□□□ -1.4
TPM3-213ENST00000368545 SMIM6P0DI80 62 aa6.32□□□□□ -1.4
TPM3-213ENST00000368545 EVI2AP22794 236 aa6.32□□□□□ -1.4
TPM3-213ENST00000368545 IQCJQ1A5X6 159 aa6.32□□□□□ -1.4
TPM3-213ENST00000368545 LINC01620Q4KN68 170 aa6.32□□□□□ -1.4
TPM3-213ENST00000368545 MRAP2Q96G30 205 aa6.32□□□□□ -1.4
TPM3-213ENST00000368545 PRELID3AQ96N28 172 aa6.32□□□□□ -1.4
TPM3-213ENST00000368545 MUC4Q99102 2169 aa6.32□□□□□ -1.4
TPM3-213ENST00000368545 SMIM17P0DL12 118 aa6.31□□□□□ -1.4
TPM3-213ENST00000368545 OR10D4PQ8NGN7 298 aa6.31□□□□□ -1.4
TPM3-213ENST00000368545 LINC01587Q99440 93 aa6.31□□□□□ -1.4
TPM3-213ENST00000368545 SAMD10Q9BYL1 202 aa6.31□□□□□ -1.4
TPM3-213ENST00000368545 HSBP1O75506 76 aa6.31□□□□□ -1.4
TPM3-213ENST00000368545 RNASEKQ6P5S7 137 aaKnown RBP6.31□□□□□ -1.4
TPM3-213ENST00000368545 TMEM208Q9BTX3 173 aa6.31□□□□□ -1.4
TPM3-213ENST00000368545 MDFICQ9P1T7 246 aa6.31□□□□□ -1.4
TPM3-213ENST00000368545 XCL2Q9UBD3 114 aa6.31□□□□□ -1.4
TPM3-213ENST00000368545 NUPR1O60356 82 aa6.3□□□□□ -1.4
TPM3-213ENST00000368545 PMCHP20382 165 aa6.3□□□□□ -1.4
TPM3-213ENST00000368545 Q8N1X5 172 aa6.3□□□□□ -1.4
TPM3-213ENST00000368545 NRACQ8N912 160 aa6.3□□□□□ -1.4
TPM3-213ENST00000368545 PTH2Q96A98 100 aa6.3□□□□□ -1.4
TPM3-213ENST00000368545 WFDC10AQ9H1F0 79 aa6.3□□□□□ -1.4
TPM3-213ENST00000368545 GOLT1BQ9Y3E0 138 aa6.3□□□□□ -1.4
TPM3-213ENST00000368545 IGLV5-45A0A087WSX0 123 aa6.29□□□□□ -1.4
TPM3-213ENST00000368545 PPP1R17O96001 155 aa6.29□□□□□ -1.4
TPM3-213ENST00000368545 LINC00614P0C842 121 aa6.29□□□□□ -1.4
TPM3-213ENST00000368545 FHL2Q14192 279 aa6.29□□□□□ -1.4
TPM3-213ENST00000368545 NIT1Q86X76 327 aa6.29□□□□□ -1.4
TPM3-213ENST00000368545 MAP1LC3AQ9H492 121 aa6.29□□□□□ -1.4
TPM3-213ENST00000368545 CDK2AP2O75956 126 aa6.29□□□□□ -1.4
TPM3-213ENST00000368545 NCR2O95944 276 aa6.29□□□□□ -1.4
TPM3-213ENST00000368545 PRSS2P07478 247 aa6.29□□□□□ -1.4
TPM3-213ENST00000368545 HTN1P15515 57 aa6.29□□□□□ -1.4
TPM3-213ENST00000368545 FA2HQ7L5A8 372 aa6.29□□□□□ -1.4
TPM3-213ENST00000368545 C14orf178Q8N769 122 aaPredicted RBP6.29□□□□□ -1.4
TPM3-213ENST00000368545 POM121L12Q8N7R1 296 aa6.29□□□□□ -1.4
TPM3-213ENST00000368545 NXT2Q9NPJ8 142 aaKnown RBP6.29□□□□□ -1.4
TPM3-213ENST00000368545 SMKR1H3BMG3 65 aa6.28□□□□□ -1.4
TPM3-213ENST00000368545 M0R2P5 195 aa6.28□□□□□ -1.4
TPM3-213ENST00000368545 NPYP01303 97 aa6.28□□□□□ -1.4
TPM3-213ENST00000368545 MGPP08493 103 aa6.28□□□□□ -1.4
TPM3-213ENST00000368545 IGLL1P15814 213 aa6.28□□□□□ -1.4
TPM3-213ENST00000368545 RPL35AP18077 110 aaKnown RBP6.28□□□□□ -1.4
TPM3-213ENST00000368545 ZNF876PQ49A33 203 aa6.28□□□□□ -1.4
TPM3-213ENST00000368545 C1orf158Q8N1D5 194 aa6.28□□□□□ -1.4
TPM3-213ENST00000368545 DEFB125Q8N687 156 aa6.28□□□□□ -1.4
TPM3-213ENST00000368545 DYNC2H1Q8NCM8 4307 aaKnown RBP6.28□□□□□ -1.4
TPM3-213ENST00000368545 A0A087WZ39 114 aa6.28□□□□□ -1.4
TPM3-213ENST00000368545 C11orf72Q8NBR9 251 aa6.28□□□□□ -1.4
TPM3-213ENST00000368545 TMEM263Q8WUH6 116 aaKnown RBP6.28□□□□□ -1.4
TPM3-213ENST00000368545 KIF25-AS1Q9Y6Z4 181 aa6.28□□□□□ -1.4
TPM3-213ENST00000368545 A8MWV9 139 aa6.27□□□□□ -1.41
TPM3-213ENST00000368545 GIG44P09565 113 aaPredicted RBP6.27□□□□□ -1.41
TPM3-213ENST00000368545 C16orf74Q96GX8 76 aa6.27□□□□□ -1.41
TPM3-213ENST00000368545 IGHV3OR16-12A0A075B7B8 117 aa6.26□□□□□ -1.41
TPM3-213ENST00000368545 TRAV26-2A0A0B4J265 109 aa6.26□□□□□ -1.41
TPM3-213ENST00000368545 IFI27P40305 119 aaPredicted RBP6.26□□□□□ -1.41
TPM3-213ENST00000368545 CSNK1G2-AS1Q8NCQ2 148 aa6.26□□□□□ -1.41
TPM3-213ENST00000368545 C20orf78Q9BR46 151 aa6.26□□□□□ -1.41
TPM3-213ENST00000368545 IGHV1-24A0A0C4DH33 117 aa6.26□□□□□ -1.41
TPM3-213ENST00000368545 KIR2DL5BA0A0G2JN68 375 aa6.26□□□□□ -1.41
TPM3-213ENST00000368545 KIR2DL5BA0A0G2JPC4 375 aa6.26□□□□□ -1.41
TPM3-213ENST00000368545 LOC389332A0A1B0GUA5 103 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 155.1 ms