RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 MRAP2Q96G30 205 aa6.77□□□□□ -1.33
VTA1-201ENST00000367621 NDUFAF3Q9BU61 184 aa6.77□□□□□ -1.33
VTA1-201ENST00000367621 IGLV2-18A0A075B6J9 118 aa6.76□□□□□ -1.33
VTA1-201ENST00000367621 TRGV1A0A0A0MS02 117 aa6.76□□□□□ -1.33
VTA1-201ENST00000367621 A8MWV9 139 aa6.76□□□□□ -1.33
VTA1-201ENST00000367621 M0QY20 66 aa6.76□□□□□ -1.33
VTA1-201ENST00000367621 NIT1Q86X76 327 aa6.76□□□□□ -1.33
VTA1-201ENST00000367621 BAGE3Q86Y29 109 aa6.76□□□□□ -1.33
VTA1-201ENST00000367621 Q8NAQ8 132 aa6.76□□□□□ -1.33
VTA1-201ENST00000367621 OR11H2Q8NH07 326 aa6.76□□□□□ -1.33
VTA1-201ENST00000367621 RPL39LQ96EH5 51 aaKnown RBP6.76□□□□□ -1.33
VTA1-201ENST00000367621 IGHV4-28A0A0C4DH34 117 aa6.75□□□□□ -1.33
VTA1-201ENST00000367621 LINC01546A6NGU7 62 aa6.75□□□□□ -1.33
VTA1-201ENST00000367621 MGPP08493 103 aa6.75□□□□□ -1.33
VTA1-201ENST00000367621 PDZD11Q5EBL8 140 aa6.75□□□□□ -1.33
VTA1-201ENST00000367621 EDA2RQ9HAV5 297 aa6.75□□□□□ -1.33
VTA1-201ENST00000367621 Q9UF83 564 aa6.75□□□□□ -1.33
VTA1-201ENST00000367621 LAMTOR2Q9Y2Q5 125 aa6.75□□□□□ -1.33
VTA1-201ENST00000367621 HUWE1Q7Z6Z7 4374 aaKnown RBP6.75□□□□□ -1.33
VTA1-201ENST00000367621 IGHV3-73A0A0B4J1V6 119 aa6.74□□□□□ -1.33
VTA1-201ENST00000367621 SMIM17P0DL12 118 aa6.74□□□□□ -1.33
VTA1-201ENST00000367621 IFI27P40305 119 aaPredicted RBP6.74□□□□□ -1.33
VTA1-201ENST00000367621 FAM74A4Q5TZK3 123 aa6.74□□□□□ -1.33
VTA1-201ENST00000367621 ZFP2Q6ZN57 461 aa6.74□□□□□ -1.33
VTA1-201ENST00000367621 ZNF479Q96JC4 524 aa6.74□□□□□ -1.33
VTA1-201ENST00000367621 HIST1H2BLQ99880 126 aa6.74□□□□□ -1.33
VTA1-201ENST00000367621 RETNQ9HD89 108 aa6.74□□□□□ -1.33
VTA1-201ENST00000367621 TP53TG1Q9Y2A0 90 aa6.74□□□□□ -1.33
VTA1-201ENST00000367621 DNAH9Q9NYC9 4486 aa6.74□□□□□ -1.33
VTA1-201ENST00000367621 TRAV4A0A0B4J268 109 aa6.73□□□□□ -1.33
VTA1-201ENST00000367621 TRBV6-5A0A0K0K1A5 114 aa6.73□□□□□ -1.33
VTA1-201ENST00000367621 LOC389332A0A1B0GUA5 103 aa6.73□□□□□ -1.33
VTA1-201ENST00000367621 GAGE12BA1L429 117 aa6.73□□□□□ -1.33
VTA1-201ENST00000367621 F5H697 171 aa6.73□□□□□ -1.33
VTA1-201ENST00000367621 DEFB4AO15263 64 aa6.73□□□□□ -1.33
VTA1-201ENST00000367621 GAGE7O76087 117 aa6.73□□□□□ -1.33
VTA1-201ENST00000367621 LINC00614P0C842 121 aa6.73□□□□□ -1.33
VTA1-201ENST00000367621 GAGE12FP0CL80 117 aa6.73□□□□□ -1.33
VTA1-201ENST00000367621 GAGE12GP0CL81 117 aa6.73□□□□□ -1.33
VTA1-201ENST00000367621 GAGE12IP0CL82 117 aa6.73□□□□□ -1.33
VTA1-201ENST00000367621 P0DMU3 169 aa6.73□□□□□ -1.33
VTA1-201ENST00000367621 FAM231AP0DMU4 169 aa6.73□□□□□ -1.33
VTA1-201ENST00000367621 FAM231CP0DMU5 169 aa6.73□□□□□ -1.33
VTA1-201ENST00000367621 MIFP14174 115 aa6.73□□□□□ -1.33
VTA1-201ENST00000367621 EMP1P54849 157 aa6.73□□□□□ -1.33
VTA1-201ENST00000367621 SBSPONQ8IVN8 264 aa6.73□□□□□ -1.33
VTA1-201ENST00000367621 CHCHD1Q96BP2 118 aaKnown RBP6.73□□□□□ -1.33
VTA1-201ENST00000367621 C18orf15Q96N68 181 aa6.73□□□□□ -1.33
VTA1-201ENST00000367621 C20orf78Q9BR46 151 aa6.73□□□□□ -1.33
VTA1-201ENST00000367621 PLA2G2DQ9UNK4 145 aa6.73□□□□□ -1.33
VTA1-201ENST00000367621 A0A096LNJ9 63 aa6.72□□□□□ -1.33
VTA1-201ENST00000367621 RHODO00212 210 aa6.72□□□□□ -1.33
VTA1-201ENST00000367621 IGHV3-53P01767 116 aa6.72□□□□□ -1.33
VTA1-201ENST00000367621 POLR2KP53803 58 aaKnown RBP6.72□□□□□ -1.33
VTA1-201ENST00000367621 RPL32P62910 135 aaKnown RBP6.72□□□□□ -1.33
VTA1-201ENST00000367621 ZNF56Q15929 161 aa6.72□□□□□ -1.33
VTA1-201ENST00000367621 RNASEKQ6P5S7 137 aaKnown RBP6.72□□□□□ -1.33
VTA1-201ENST00000367621 FAM19A2Q8N3H0 131 aa6.72□□□□□ -1.33
VTA1-201ENST00000367621 Q8N8P6 123 aa6.72□□□□□ -1.33
VTA1-201ENST00000367621 OR4C5Q8NGB2 326 aa6.72□□□□□ -1.33
VTA1-201ENST00000367621 DKK2Q9UBU2 259 aa6.72□□□□□ -1.33
VTA1-201ENST00000367621 FBN3Q75N90 2809 aa6.71□□□□□ -1.34
VTA1-201ENST00000367621 LYRM9A8MSI8 78 aa6.71□□□□□ -1.34
VTA1-201ENST00000367621 SUMO2P61956 95 aaKnown RBP6.71□□□□□ -1.34
VTA1-201ENST00000367621 FHL2Q14192 279 aa6.71□□□□□ -1.34
VTA1-201ENST00000367621 FAM222AQ5U5X8 452 aa6.71□□□□□ -1.34
VTA1-201ENST00000367621 PRSS3P2Q8NHM4 247 aa6.71□□□□□ -1.34
VTA1-201ENST00000367621 PACRGQ96M98 296 aaPredicted RBP6.71□□□□□ -1.34
VTA1-201ENST00000367621 SMIM2Q9BVW6 85 aa6.71□□□□□ -1.34
VTA1-201ENST00000367621 MAP1LC3AQ9H492 121 aa6.71□□□□□ -1.34
VTA1-201ENST00000367621 CELA1Q9UNI1 258 aa6.71□□□□□ -1.34
VTA1-201ENST00000367621 IGHV1-24A0A0C4DH33 117 aa6.7□□□□□ -1.34
VTA1-201ENST00000367621 PPP1R17O96001 155 aa6.7□□□□□ -1.34
VTA1-201ENST00000367621 FABP4P15090 132 aa6.7□□□□□ -1.34
VTA1-201ENST00000367621 PMCHL1Q16048 86 aa6.7□□□□□ -1.34
VTA1-201ENST00000367621 FA2HQ7L5A8 372 aa6.7□□□□□ -1.34
VTA1-201ENST00000367621 NEGR1Q7Z3B1 354 aa6.7□□□□□ -1.34
VTA1-201ENST00000367621 NEXN-AS1Q8NBZ9 246 aa6.7□□□□□ -1.34
VTA1-201ENST00000367621 TM2D3Q9BRN9 247 aa6.7□□□□□ -1.34
VTA1-201ENST00000367621 TMEM70Q9BUB7 260 aa6.7□□□□□ -1.34
VTA1-201ENST00000367621 NIT2Q9NQR4 276 aa6.7□□□□□ -1.34
VTA1-201ENST00000367621 TRGV2A0A075B6R0 118 aa6.69□□□□□ -1.34
VTA1-201ENST00000367621 SDHAF1A6NFY7 115 aa6.69□□□□□ -1.34
VTA1-201ENST00000367621 CIDEAO60543 219 aa6.69□□□□□ -1.34
VTA1-201ENST00000367621 DEFB130BP0DP73 79 aa6.69□□□□□ -1.34
VTA1-201ENST00000367621 DEFB130AP0DP74 79 aa6.69□□□□□ -1.34
VTA1-201ENST00000367621 PMCHP20382 165 aa6.69□□□□□ -1.34
VTA1-201ENST00000367621 KRTAP5-3Q6L8H2 238 aa6.69□□□□□ -1.34
VTA1-201ENST00000367621 SLC25A29Q8N8R3 303 aa6.69□□□□□ -1.34
VTA1-201ENST00000367621 TMEM18Q96B42 140 aa6.69□□□□□ -1.34
VTA1-201ENST00000367621 ST20Q9HBF5 79 aa6.69□□□□□ -1.34
VTA1-201ENST00000367621 NXT2Q9NPJ8 142 aaKnown RBP6.69□□□□□ -1.34
VTA1-201ENST00000367621 TENM3Q9P273 2699 aa6.68□□□□□ -1.34
VTA1-201ENST00000367621 TRBV27A0A0K0K1C4 114 aa6.68□□□□□ -1.34
VTA1-201ENST00000367621 H7C1H1 209 aa6.68□□□□□ -1.34
VTA1-201ENST00000367621 VCYO14598 125 aa6.68□□□□□ -1.34
VTA1-201ENST00000367621 TCAPO15273 167 aa6.68□□□□□ -1.34
VTA1-201ENST00000367621 HSBP1O75506 76 aa6.68□□□□□ -1.34
VTA1-201ENST00000367621 S100A2P29034 98 aa6.68□□□□□ -1.34
VTA1-201ENST00000367621 AMTP48728 403 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms