RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 CRYGBP07316 175 aa11.9□□□□□ -0.5
NUCKS1-201ENST00000367142 PI4KAP42356 2102 aa11.9□□□□□ -0.5
NUCKS1-201ENST00000367142 TRAV10A0A0B4J240 114 aa11.9□□□□□ -0.5
NUCKS1-201ENST00000367142 MED12Q93074 2177 aa11.9□□□□□ -0.5
NUCKS1-201ENST00000367142 IGKV2D-26A0A0A0MRZ7 120 aa11.9□□□□□ -0.5
NUCKS1-201ENST00000367142 MGAMO43451 1857 aa11.9□□□□□ -0.5
NUCKS1-201ENST00000367142 IGKV1D-37A0A075B6S9 117 aa11.89□□□□□ -0.51
NUCKS1-201ENST00000367142 MIAQ16674 131 aa11.89□□□□□ -0.51
NUCKS1-201ENST00000367142 ODF3BA8MYP8 253 aa11.89□□□□□ -0.51
NUCKS1-201ENST00000367142 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.89□□□□□ -0.51
NUCKS1-201ENST00000367142 Q8NA96 180 aa11.89□□□□□ -0.51
NUCKS1-201ENST00000367142 USF3Q68DE3 2245 aa11.89□□□□□ -0.51
NUCKS1-201ENST00000367142 FAM19A5Q7Z5A7 132 aaPredicted RBP11.89□□□□□ -0.51
NUCKS1-201ENST00000367142 CCDC140Q96MF4 163 aa11.89□□□□□ -0.51
NUCKS1-201ENST00000367142 ZNF706Q9Y5V0 76 aaPredicted RBP11.89□□□□□ -0.51
NUCKS1-201ENST00000367142 TP53BP1Q12888 1972 aaPredicted RBP11.88□□□□□ -0.51
NUCKS1-201ENST00000367142 DEFB114Q30KQ6 69 aa11.88□□□□□ -0.51
NUCKS1-201ENST00000367142 CEMP1Q6PRD7 247 aaPredicted RBP11.88□□□□□ -0.51
NUCKS1-201ENST00000367142 FRMPD3Q5JV73 1810 aa11.88□□□□□ -0.51
NUCKS1-201ENST00000367142 SVIPQ8NHG7 77 aa11.88□□□□□ -0.51
NUCKS1-201ENST00000367142 SS18L2Q9UHA2 77 aa11.88□□□□□ -0.51
NUCKS1-201ENST00000367142 FXYD2P54710 66 aa11.88□□□□□ -0.51
NUCKS1-201ENST00000367142 LMO4P61968 165 aa11.88□□□□□ -0.51
NUCKS1-201ENST00000367142 ACACAQ13085 2346 aa11.88□□□□□ -0.51
NUCKS1-201ENST00000367142 TSC2P49815 1807 aa11.87□□□□□ -0.51
NUCKS1-201ENST00000367142 PLXNA2O75051 1894 aa11.87□□□□□ -0.51
NUCKS1-201ENST00000367142 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.87□□□□□ -0.51
NUCKS1-201ENST00000367142 C19orf84I3L1E1 186 aa11.87□□□□□ -0.51
NUCKS1-201ENST00000367142 POLEQ07864 2286 aa11.87□□□□□ -0.51
NUCKS1-201ENST00000367142 SPTBN1Q01082 2364 aaKnown RBP11.87□□□□□ -0.51
NUCKS1-201ENST00000367142 TANC1Q9C0D5 1861 aa11.87□□□□□ -0.51
NUCKS1-201ENST00000367142 TP53TG3Q9ULZ0 132 aa11.87□□□□□ -0.51
NUCKS1-201ENST00000367142 UBE2D4Q9Y2X8 147 aa11.86□□□□□ -0.51
NUCKS1-201ENST00000367142 DOPEY2Q9Y3R5 2298 aa11.86□□□□□ -0.51
NUCKS1-201ENST00000367142 GVINP1Q7Z2Y8 2422 aa11.86□□□□□ -0.51
NUCKS1-201ENST00000367142 J3KT08 172 aa11.86□□□□□ -0.51
NUCKS1-201ENST00000367142 IGF1P05019 195 aa11.85□□□□□ -0.51
NUCKS1-201ENST00000367142 P0DMU3 169 aa11.85□□□□□ -0.51
NUCKS1-201ENST00000367142 FAM231AP0DMU4 169 aa11.85□□□□□ -0.51
NUCKS1-201ENST00000367142 FAM231CP0DMU5 169 aa11.85□□□□□ -0.51
NUCKS1-201ENST00000367142 HIST2H2BDQ6DRA6 164 aa11.85□□□□□ -0.51
NUCKS1-201ENST00000367142 LINC01548A6NM66 108 aa11.85□□□□□ -0.51
NUCKS1-201ENST00000367142 E7EUB6 86 aa11.85□□□□□ -0.51
NUCKS1-201ENST00000367142 LINC00322Q6ZN03 302 aaPredicted RBP11.85□□□□□ -0.51
NUCKS1-201ENST00000367142 TAX1BP3O14907 124 aa11.85□□□□□ -0.51
NUCKS1-201ENST00000367142 SPRY4Q9C004 299 aa11.84□□□□□ -0.51
NUCKS1-201ENST00000367142 CNOT1A5YKK6 2376 aaKnown RBP11.84□□□□□ -0.51
NUCKS1-201ENST00000367142 A0A1W2PNU3 283 aaPredicted RBP11.84□□□□□ -0.51
NUCKS1-201ENST00000367142 ODF1Q14990 250 aa11.84□□□□□ -0.51
NUCKS1-201ENST00000367142 DIDO1Q9BTC0 2240 aaKnown RBP11.84□□□□□ -0.51
NUCKS1-201ENST00000367142 KMT2EQ8IZD2 1858 aa11.83□□□□□ -0.52
NUCKS1-201ENST00000367142 TTTY13Q9BZ97 58 aa11.83□□□□□ -0.52
NUCKS1-201ENST00000367142 LY6G6DO95868 133 aa11.83□□□□□ -0.52
NUCKS1-201ENST00000367142 K7EQG2 157 aa11.83□□□□□ -0.52
NUCKS1-201ENST00000367142 SYCNQ0VAF6 134 aa11.82□□□□□ -0.52
NUCKS1-201ENST00000367142 LINC00482Q8N8I6 264 aa11.82□□□□□ -0.52
NUCKS1-201ENST00000367142 SPTBN2O15020 2390 aa11.82□□□□□ -0.52
NUCKS1-201ENST00000367142 FOXI1Q12951 378 aa11.82□□□□□ -0.52
NUCKS1-201ENST00000367142 COA6Q5JTJ3 125 aaKnown RBP11.82□□□□□ -0.52
NUCKS1-201ENST00000367142 Q6ZSV7 163 aa11.81□□□□□ -0.52
NUCKS1-201ENST00000367142 LINC00467Q9BRT7 94 aa11.81□□□□□ -0.52
NUCKS1-201ENST00000367142 LY6G6CO95867 125 aa11.81□□□□□ -0.52
NUCKS1-201ENST00000367142 A0A0J9YXY3 114 aa11.81□□□□□ -0.52
NUCKS1-201ENST00000367142 NCKAP5O14513 1909 aa11.8□□□□□ -0.52
NUCKS1-201ENST00000367142 UBE2D3P61077 147 aa11.8□□□□□ -0.52
NUCKS1-201ENST00000367142 PRR15LQ9BU68 103 aa11.8□□□□□ -0.52
NUCKS1-201ENST00000367142 C19orf71A6NCJ1 209 aa11.8□□□□□ -0.52
NUCKS1-201ENST00000367142 SPANXB1Q9NS25 103 aaPredicted RBP11.8□□□□□ -0.52
NUCKS1-201ENST00000367142 ZNF843Q8N446 348 aa11.8□□□□□ -0.52
NUCKS1-201ENST00000367142 DOCK7Q96N67 2140 aa11.8□□□□□ -0.52
NUCKS1-201ENST00000367142 IGLV2-18A0A075B6J9 118 aa11.8□□□□□ -0.52
NUCKS1-201ENST00000367142 CADP27708 2225 aa11.79□□□□□ -0.52
NUCKS1-201ENST00000367142 M0R2N4 97 aa11.79□□□□□ -0.52
NUCKS1-201ENST00000367142 NEXN-AS1Q8NBZ9 246 aa11.79□□□□□ -0.52
NUCKS1-201ENST00000367142 NUPR1O60356 82 aa11.79□□□□□ -0.52
NUCKS1-201ENST00000367142 IGLV2-14P01704 120 aa11.79□□□□□ -0.52
NUCKS1-201ENST00000367142 TRBV6-4A0A1B0GX49 114 aa11.79□□□□□ -0.52
NUCKS1-201ENST00000367142 WFDC2Q14508 124 aa11.79□□□□□ -0.52
NUCKS1-201ENST00000367142 MYLKQ15746 1914 aa11.79□□□□□ -0.52
NUCKS1-201ENST00000367142 IBA57-AS1B1ANH7 110 aa11.79□□□□□ -0.52
NUCKS1-201ENST00000367142 MSMPQ1L6U9 139 aa11.79□□□□□ -0.52
NUCKS1-201ENST00000367142 TRBV6-8A0A0A6YYG3 113 aa11.78□□□□□ -0.52
NUCKS1-201ENST00000367142 LINC00643Q86TS7 51 aa11.78□□□□□ -0.52
NUCKS1-201ENST00000367142 C3orf22Q8N5N4 141 aa11.78□□□□□ -0.52
NUCKS1-201ENST00000367142 WFDC10BQ8IUB3 73 aa11.78□□□□□ -0.52
NUCKS1-201ENST00000367142 TRAV23DV6A0A075B6W5 121 aa11.77□□□□□ -0.52
NUCKS1-201ENST00000367142 PLXND1Q9Y4D7 1925 aa11.77□□□□□ -0.52
NUCKS1-201ENST00000367142 C9orf85Q96MD7 179 aa11.77□□□□□ -0.53
NUCKS1-201ENST00000367142 NUP210Q8TEM1 1887 aaPredicted RBP11.76□□□□□ -0.53
NUCKS1-201ENST00000367142 CFAP126Q5VTH2 177 aa11.76□□□□□ -0.53
NUCKS1-201ENST00000367142 ZNF80P51504 273 aaPredicted RBP11.76□□□□□ -0.53
NUCKS1-201ENST00000367142 EML6Q6ZMW3 1958 aa11.75□□□□□ -0.53
NUCKS1-201ENST00000367142 SPTSSBQ8NFR3 76 aa11.75□□□□□ -0.53
NUCKS1-201ENST00000367142 TEX49A0A1B0GTD5 131 aa11.75□□□□□ -0.53
NUCKS1-201ENST00000367142 LY6LH3BQJ8 138 aa11.75□□□□□ -0.53
NUCKS1-201ENST00000367142 DOCK8Q8NF50 2099 aa11.75□□□□□ -0.53
NUCKS1-201ENST00000367142 FSTL3O95633 263 aa11.75□□□□□ -0.53
NUCKS1-201ENST00000367142 SPINK6Q6UWN8 80 aa11.75□□□□□ -0.53
NUCKS1-201ENST00000367142 XAGE1AQ9HD64 81 aa11.75□□□□□ -0.53
NUCKS1-201ENST00000367142 C20orf173Q96LM9 149 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms