RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 SPART-AS1P0CW21 52 aa9.24□□□□□ -0.93
CDC42BPA-203ENST00000366766 IGHV3-38A0A0C4DH36 116 aa9.24□□□□□ -0.93
CDC42BPA-203ENST00000366766 FASNP49327 2511 aaKnown RBP9.24□□□□□ -0.93
CDC42BPA-203ENST00000366766 AMTNQ6UX39 209 aa9.24□□□□□ -0.93
CDC42BPA-203ENST00000366766 SELENOKQ9Y6D0 94 aa9.24□□□□□ -0.93
CDC42BPA-203ENST00000366766 A0A0J9YX75 114 aa9.24□□□□□ -0.93
CDC42BPA-203ENST00000366766 EBI3Q14213 229 aa9.24□□□□□ -0.93
CDC42BPA-203ENST00000366766 DEFB104AQ8WTQ1 72 aa9.24□□□□□ -0.93
CDC42BPA-203ENST00000366766 IGHV1-58A0A0C4DH39 117 aa9.24□□□□□ -0.93
CDC42BPA-203ENST00000366766 LGALS9O00182 355 aa9.24□□□□□ -0.93
CDC42BPA-203ENST00000366766 A4D1N5 150 aa9.24□□□□□ -0.93
CDC42BPA-203ENST00000366766 NUPR1O60356 82 aa9.24□□□□□ -0.93
CDC42BPA-203ENST00000366766 CFHR3Q02985 330 aa9.24□□□□□ -0.93
CDC42BPA-203ENST00000366766 SND1-IT1Q9HBX3 110 aa9.24□□□□□ -0.93
CDC42BPA-203ENST00000366766 CRIP3Q6Q6R5 217 aa9.24□□□□□ -0.93
CDC42BPA-203ENST00000366766 C15orf53Q8NAA6 179 aa9.24□□□□□ -0.93
CDC42BPA-203ENST00000366766 C1orf43Q9BWL3 253 aa9.23□□□□□ -0.93
CDC42BPA-203ENST00000366766 GRNP28799 593 aaKnown RBP9.23□□□□□ -0.93
CDC42BPA-203ENST00000366766 TNFRSF13BO14836 293 aaPredicted RBP9.23□□□□□ -0.93
CDC42BPA-203ENST00000366766 CDPF1Q6NVV7 123 aa9.23□□□□□ -0.93
CDC42BPA-203ENST00000366766 TDRG1Q3Y452 100 aa9.23□□□□□ -0.93
CDC42BPA-203ENST00000366766 NTN5Q8WTR8 489 aaPredicted RBP9.23□□□□□ -0.93
CDC42BPA-203ENST00000366766 MBD6Q96DN6 1003 aa9.23□□□□□ -0.93
CDC42BPA-203ENST00000366766 F6UB75 175 aa9.23□□□□□ -0.93
CDC42BPA-203ENST00000366766 IGHV4-38-2P0DP08 117 aa9.23□□□□□ -0.93
CDC42BPA-203ENST00000366766 ZMAT4Q9H898 229 aa9.23□□□□□ -0.93
CDC42BPA-203ENST00000366766 A0A1W2PNU3 283 aaPredicted RBP9.22□□□□□ -0.93
CDC42BPA-203ENST00000366766 ZNF295-AS1Q8N0V1 137 aa9.22□□□□□ -0.93
CDC42BPA-203ENST00000366766 XCL1P47992 114 aa9.22□□□□□ -0.93
CDC42BPA-203ENST00000366766 C20orf203Q8NBC4 194 aa9.22□□□□□ -0.93
CDC42BPA-203ENST00000366766 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.22□□□□□ -0.93
CDC42BPA-203ENST00000366766 IGKV2-29A2NJV5 120 aaPredicted RBP9.22□□□□□ -0.93
CDC42BPA-203ENST00000366766 IGLC6P0CF74 106 aa9.22□□□□□ -0.93
CDC42BPA-203ENST00000366766 DEFB121Q5J5C9 76 aa9.22□□□□□ -0.93
CDC42BPA-203ENST00000366766 IGHV4-30-2A0A087WSY4 118 aa9.22□□□□□ -0.93
CDC42BPA-203ENST00000366766 A0A0J9YXY3 114 aa9.21□□□□□ -0.93
CDC42BPA-203ENST00000366766 C10orf142B7Z368 130 aa9.21□□□□□ -0.93
CDC42BPA-203ENST00000366766 BLCAPP62952 87 aa9.21□□□□□ -0.93
CDC42BPA-203ENST00000366766 HAMPP81172 84 aa9.21□□□□□ -0.93
CDC42BPA-203ENST00000366766 VSIG2Q96IQ7 327 aa9.21□□□□□ -0.93
CDC42BPA-203ENST00000366766 YPEL4Q96NS1 127 aa9.21□□□□□ -0.93
CDC42BPA-203ENST00000366766 MYCNOSP40205 109 aa9.21□□□□□ -0.93
CDC42BPA-203ENST00000366766 TRAV4A0A0B4J268 109 aa9.21□□□□□ -0.94
CDC42BPA-203ENST00000366766 E7EUB6 86 aa9.21□□□□□ -0.94
CDC42BPA-203ENST00000366766 FXYD2P54710 66 aa9.21□□□□□ -0.94
CDC42BPA-203ENST00000366766 TINCRA0A1B0GVN0 87 aa9.21□□□□□ -0.94
CDC42BPA-203ENST00000366766 TAX1BP3O14907 124 aa9.21□□□□□ -0.94
CDC42BPA-203ENST00000366766 TMEM258P61165 79 aa9.21□□□□□ -0.94
CDC42BPA-203ENST00000366766 GYPEP15421 78 aa9.21□□□□□ -0.94
CDC42BPA-203ENST00000366766 GATA1P15976 413 aaPredicted RBP9.21□□□□□ -0.94
CDC42BPA-203ENST00000366766 U3KQK5 164 aa9.21□□□□□ -0.94
CDC42BPA-203ENST00000366766 IGLV2-8P01709 118 aa9.21□□□□□ -0.94
CDC42BPA-203ENST00000366766 LINC01620Q4KN68 170 aa9.21□□□□□ -0.94
CDC42BPA-203ENST00000366766 CRYGBP07316 175 aa9.2□□□□□ -0.94
CDC42BPA-203ENST00000366766 LOXL1Q08397 574 aaPredicted RBP9.2□□□□□ -0.94
CDC42BPA-203ENST00000366766 MSRB1Q9NZV6 116 aa9.2□□□□□ -0.94
CDC42BPA-203ENST00000366766 MRPL36Q9P0J6 103 aaKnown RBP9.2□□□□□ -0.94
CDC42BPA-203ENST00000366766 ZFP36P26651 326 aaKnown RBP9.2□□□□□ -0.94
CDC42BPA-203ENST00000366766 TM2D2Q9BX73 214 aa9.2□□□□□ -0.94
CDC42BPA-203ENST00000366766 A0A0B4J2C4 111 aa9.2□□□□□ -0.94
CDC42BPA-203ENST00000366766 BRWD1-AS2P59051 145 aa9.2□□□□□ -0.94
CDC42BPA-203ENST00000366766 ZNF462Q96JM2 2506 aa9.2□□□□□ -0.94
CDC42BPA-203ENST00000366766 A0A0J9YXV3 536 aa9.2□□□□□ -0.94
CDC42BPA-203ENST00000366766 SLURP1P55000 103 aa9.2□□□□□ -0.94
CDC42BPA-203ENST00000366766 Q6ZPA2 131 aa9.19□□□□□ -0.94
CDC42BPA-203ENST00000366766 NXPH4O95158 308 aa9.19□□□□□ -0.94
CDC42BPA-203ENST00000366766 A6NDX4 124 aa9.19□□□□□ -0.94
CDC42BPA-203ENST00000366766 TRBV10-2A0A0K0K1G8 114 aa9.19□□□□□ -0.94
CDC42BPA-203ENST00000366766 TMEM256-PLSCR3K7ERE1 68 aa9.19□□□□□ -0.94
CDC42BPA-203ENST00000366766 LINC00173Q6ZV60 143 aa9.19□□□□□ -0.94
CDC42BPA-203ENST00000366766 MUSTN1Q8IVN3 82 aa9.19□□□□□ -0.94
CDC42BPA-203ENST00000366766 MAPK1IP1LQ8NDC0 245 aa9.19□□□□□ -0.94
CDC42BPA-203ENST00000366766 Q8NA96 180 aa9.18□□□□□ -0.94
CDC42BPA-203ENST00000366766 SMIM9A6NGZ8 99 aa9.18□□□□□ -0.94
CDC42BPA-203ENST00000366766 LRRC75A-AS1Q8N1F1 130 aa9.18□□□□□ -0.94
CDC42BPA-203ENST00000366766 MSMPQ1L6U9 139 aa9.18□□□□□ -0.94
CDC42BPA-203ENST00000366766 FOXI1Q12951 378 aa9.18□□□□□ -0.94
CDC42BPA-203ENST00000366766 NDUFA1O15239 70 aa9.18□□□□□ -0.94
CDC42BPA-203ENST00000366766 MIAQ16674 131 aa9.18□□□□□ -0.94
CDC42BPA-203ENST00000366766 CCDC140Q96MF4 163 aa9.18□□□□□ -0.94
CDC42BPA-203ENST00000366766 IGHV4OR15-8A0A075B7B6 117 aa9.18□□□□□ -0.94
CDC42BPA-203ENST00000366766 A0A087WW49 117 aa9.18□□□□□ -0.94
CDC42BPA-203ENST00000366766 NDUFA11Q86Y39 141 aa9.18□□□□□ -0.94
CDC42BPA-203ENST00000366766 ASPHD1Q5U4P2 390 aa9.17□□□□□ -0.94
CDC42BPA-203ENST00000366766 PRAC2D3DTV9 90 aa9.17□□□□□ -0.94
CDC42BPA-203ENST00000366766 HHLA3Q9XRX5 114 aa9.17□□□□□ -0.94
CDC42BPA-203ENST00000366766 PROP1O75360 226 aa9.17□□□□□ -0.94
CDC42BPA-203ENST00000366766 HIST2H2BCQ6DN03 193 aa9.17□□□□□ -0.94
CDC42BPA-203ENST00000366766 F8P00451 2351 aa9.17□□□□□ -0.94
CDC42BPA-203ENST00000366766 LY6LH3BQJ8 138 aa9.17□□□□□ -0.94
CDC42BPA-203ENST00000366766 PIK3CD-AS1Q5SR53 167 aa9.17□□□□□ -0.94
CDC42BPA-203ENST00000366766 RNASE13Q5GAN3 156 aaKnown RBP9.16□□□□□ -0.94
CDC42BPA-203ENST00000366766 G3V4G9 280 aa9.16□□□□□ -0.94
CDC42BPA-203ENST00000366766 DEFB136Q30KP8 78 aa9.16□□□□□ -0.94
CDC42BPA-203ENST00000366766 SPANXB1Q9NS25 103 aaPredicted RBP9.16□□□□□ -0.94
CDC42BPA-203ENST00000366766 LMO4P61968 165 aa9.16□□□□□ -0.94
CDC42BPA-203ENST00000366766 CNFNQ9BYD5 112 aa9.16□□□□□ -0.94
CDC42BPA-203ENST00000366766 RPL39P62891 51 aaKnown RBP9.16□□□□□ -0.94
CDC42BPA-203ENST00000366766 PCSK5Q92824 1860 aa9.15□□□□□ -0.94
CDC42BPA-203ENST00000366766 ATP5EP2Q5VTU8 51 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms