RNA–Protein interactions for RNA: ENST00000364351.1

RNU4-40P-201, Transcript of RNA, U4 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU4-40P, Length 143 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-40P-201ENST00000364351 MYO15AQ9UKN7 3530 aa-3.34□□□□□ -2.94
RNU4-40P-201ENST00000364351 XIRP1Q702N8 1843 aaKnown RBP-3.34□□□□□ -2.94
RNU4-40P-201ENST00000364351 NCALDP61601 193 aa-3.34□□□□□ -2.94
RNU4-40P-201ENST00000364351 NPC2P61916 151 aa-3.34□□□□□ -2.94
RNU4-40P-201ENST00000364351 BASP1P80723 227 aaKnown RBP-3.34□□□□□ -2.94
RNU4-40P-201ENST00000364351 TMEM97Q5BJF2 176 aa-3.34□□□□□ -2.94
RNU4-40P-201ENST00000364351 ATP6V1G3Q96LB4 118 aa-3.34□□□□□ -2.94
RNU4-40P-201ENST00000364351 PRELID3AQ96N28 172 aa-3.34□□□□□ -2.94
RNU4-40P-201ENST00000364351 WFDC6Q9BQY6 131 aa-3.34□□□□□ -2.94
RNU4-40P-201ENST00000364351 LXNQ9BS40 222 aa-3.34□□□□□ -2.94
RNU4-40P-201ENST00000364351 MED11Q9P086 117 aa-3.34□□□□□ -2.94
RNU4-40P-201ENST00000364351 APLNQ9ULZ1 77 aa-3.34□□□□□ -2.94
RNU4-40P-201ENST00000364351 S4R3F8 94 aa-3.34□□□□□ -2.94
RNU4-40P-201ENST00000364351 PRUNE2Q8WUY3 3088 aa-3.35□□□□□ -2.95
RNU4-40P-201ENST00000364351 NRXN2Q9P2S2 1712 aa-3.35□□□□□ -2.95
RNU4-40P-201ENST00000364351 KDM5AP29375 1690 aaKnown RBP-3.35□□□□□ -2.95
RNU4-40P-201ENST00000364351 SLC25A4P12235 298 aa-3.35□□□□□ -2.95
RNU4-40P-201ENST00000364351 DEFB123Q8N688 67 aa-3.35□□□□□ -2.95
RNU4-40P-201ENST00000364351 BRK1Q8WUW1 75 aa-3.35□□□□□ -2.95
RNU4-40P-201ENST00000364351 IFI27L1Q96BM0 104 aa-3.35□□□□□ -2.95
RNU4-40P-201ENST00000364351 PYCARDQ9ULZ3 195 aa-3.35□□□□□ -2.95
RNU4-40P-201ENST00000364351 IGHV1-24A0A0C4DH33 117 aa-3.36□□□□□ -2.95
RNU4-40P-201ENST00000364351 MAGOHP61326 146 aaKnown RBP-3.36□□□□□ -2.95
RNU4-40P-201ENST00000364351 SCGB2B2Q4G0G5 96 aa-3.36□□□□□ -2.95
RNU4-40P-201ENST00000364351 NDUFA11Q86Y39 141 aa-3.36□□□□□ -2.95
RNU4-40P-201ENST00000364351 NUBP2Q9Y5Y2 271 aa-3.36□□□□□ -2.95
RNU4-40P-201ENST00000364351 DYNC2H1Q8NCM8 4307 aaKnown RBP-3.36□□□□□ -2.95
RNU4-40P-201ENST00000364351 TRAPPC8Q9Y2L5 1435 aa-3.36□□□□□ -2.95
RNU4-40P-201ENST00000364351 SMR3BP02814 79 aaPredicted RBP-3.37□□□□□ -2.95
RNU4-40P-201ENST00000364351 EDDM3BP56851 147 aa-3.37□□□□□ -2.95
RNU4-40P-201ENST00000364351 ARF6P62330 175 aa-3.37□□□□□ -2.95
RNU4-40P-201ENST00000364351 IL20Q9NYY1 176 aa-3.37□□□□□ -2.95
RNU4-40P-201ENST00000364351 SPTBN5Q9NRC6 3674 aaKnown RBP-3.38□□□□□ -2.95
RNU4-40P-201ENST00000364351 ANKRD31Q8N7Z5 1873 aa-3.38□□□□□ -2.95
RNU4-40P-201ENST00000364351 ADGBQ8N7X0 1667 aa-3.38□□□□□ -2.95
RNU4-40P-201ENST00000364351 PTPRMP28827 1452 aa-3.38□□□□□ -2.95
RNU4-40P-201ENST00000364351 RIIAD1A6NNX1 92 aa-3.38□□□□□ -2.95
RNU4-40P-201ENST00000364351 J3KT08 172 aa-3.38□□□□□ -2.95
RNU4-40P-201ENST00000364351 NDUFC2O95298 119 aa-3.38□□□□□ -2.95
RNU4-40P-201ENST00000364351 FABP2P12104 132 aa-3.38□□□□□ -2.95
RNU4-40P-201ENST00000364351 BLCAPP62952 87 aa-3.38□□□□□ -2.95
RNU4-40P-201ENST00000364351 TEX29Q8N6K0 151 aa-3.38□□□□□ -2.95
RNU4-40P-201ENST00000364351 OR51A4Q8NGJ6 313 aa-3.38□□□□□ -2.95
RNU4-40P-201ENST00000364351 NKIRAS1Q9NYS0 192 aa-3.38□□□□□ -2.95
RNU4-40P-201ENST00000364351 FREM2Q5SZK8 3169 aa-3.39□□□□□ -2.95
RNU4-40P-201ENST00000364351 CSMD2Q7Z408 3487 aa-3.39□□□□□ -2.95
RNU4-40P-201ENST00000364351 KIF13AQ9H1H9 1805 aa-3.39□□□□□ -2.95
RNU4-40P-201ENST00000364351 GAPVD1Q14C86 1478 aa-3.39□□□□□ -2.95
RNU4-40P-201ENST00000364351 TRAV16A0A0A6YYK6 109 aaPredicted RBP-3.39□□□□□ -2.95
RNU4-40P-201ENST00000364351 SYS1-DBNDD2H3BUS1 97 aa-3.39□□□□□ -2.95
RNU4-40P-201ENST00000364351 SSSCA1O60232 199 aa-3.39□□□□□ -2.95
RNU4-40P-201ENST00000364351 CKS2P33552 79 aa-3.39□□□□□ -2.95
RNU4-40P-201ENST00000364351 RTL8BQ17RB0 113 aa-3.39□□□□□ -2.95
RNU4-40P-201ENST00000364351 MORN4Q8NDC4 146 aa-3.39□□□□□ -2.95
RNU4-40P-201ENST00000364351 OTOSQ8NHW6 89 aa-3.39□□□□□ -2.95
RNU4-40P-201ENST00000364351 RTL8AQ9BWD3 113 aa-3.39□□□□□ -2.95
RNU4-40P-201ENST00000364351 ARFGEF1Q9Y6D6 1849 aa-3.4□□□□□ -2.95
RNU4-40P-201ENST00000364351 MAP1LC3B2A6NCE7 125 aa-3.4□□□□□ -2.95
RNU4-40P-201ENST00000364351 APOA2P02652 100 aa-3.4□□□□□ -2.95
RNU4-40P-201ENST00000364351 COX8AP10176 69 aa-3.4□□□□□ -2.95
RNU4-40P-201ENST00000364351 SIGMAR1Q99720 223 aa-3.4□□□□□ -2.95
RNU4-40P-201ENST00000364351 OTORQ9NRC9 128 aa-3.4□□□□□ -2.95
RNU4-40P-201ENST00000364351 NDUFAF1Q9Y375 327 aa-3.4□□□□□ -2.95
RNU4-40P-201ENST00000364351 H3BQV1 296 aa-3.41□□□□□ -2.96
RNU4-40P-201ENST00000364351 AIPO00170 330 aa-3.41□□□□□ -2.96
RNU4-40P-201ENST00000364351 PAIP2Q9BPZ3 127 aaKnown RBP-3.41□□□□□ -2.96
RNU4-40P-201ENST00000364351 DOCK1Q14185 1865 aa-3.41□□□□□ -2.96
RNU4-40P-201ENST00000364351 PARP14Q460N5 1801 aa-3.42□□□□□ -2.96
RNU4-40P-201ENST00000364351 MYH1P12882 1939 aa-3.42□□□□□ -2.96
RNU4-40P-201ENST00000364351 H0YJX3 145 aa-3.42□□□□□ -2.96
RNU4-40P-201ENST00000364351 CYBAP13498 195 aa-3.42□□□□□ -2.96
RNU4-40P-201ENST00000364351 BTF3L4Q96K17 158 aa-3.42□□□□□ -2.96
RNU4-40P-201ENST00000364351 NMNAT1Q9HAN9 279 aaPredicted RBP-3.42□□□□□ -2.96
RNU4-40P-201ENST00000364351 CTNNBIP1Q9NSA3 81 aaPredicted RBP-3.42□□□□□ -2.96
RNU4-40P-201ENST00000364351 FAM32AQ9Y421 112 aaKnown RBP-3.42□□□□□ -2.96
RNU4-40P-201ENST00000364351 CCDC171Q6TFL3 1326 aa-3.43□□□□□ -2.96
RNU4-40P-201ENST00000364351 TMEM114B3SHH9 223 aa-3.43□□□□□ -2.96
RNU4-40P-201ENST00000364351 YPEL1O60688 119 aa-3.43□□□□□ -2.96
RNU4-40P-201ENST00000364351 SLC25A6P12236 298 aa-3.43□□□□□ -2.96
RNU4-40P-201ENST00000364351 HSPE1P61604 102 aaKnown RBP-3.43□□□□□ -2.96
RNU4-40P-201ENST00000364351 RPL19P84098 196 aaKnown RBP-3.43□□□□□ -2.96
RNU4-40P-201ENST00000364351 SPCS2Q15005 226 aa-3.43□□□□□ -2.96
RNU4-40P-201ENST00000364351 LRTM1Q9HBL6 345 aa-3.43□□□□□ -2.96
RNU4-40P-201ENST00000364351 LAMTOR3Q9UHA4 124 aa-3.43□□□□□ -2.96
RNU4-40P-201ENST00000364351 MAGI1Q96QZ7 1491 aaPredicted RBP-3.43□□□□□ -2.96
RNU4-40P-201ENST00000364351 CPSF4LA6NMK7 179 aaKnown RBP-3.44□□□□□ -2.96
RNU4-40P-201ENST00000364351 LIN52Q52LA3 116 aa-3.44□□□□□ -2.96
RNU4-40P-201ENST00000364351 HRCT1Q6UXD1 115 aa-3.44□□□□□ -2.96
RNU4-40P-201ENST00000364351 CROCCP2Q86T23 111 aa-3.44□□□□□ -2.96
RNU4-40P-201ENST00000364351 BAGE3Q86Y29 109 aa-3.44□□□□□ -2.96
RNU4-40P-201ENST00000364351 BORCS8Q96FH0 119 aa-3.44□□□□□ -2.96
RNU4-40P-201ENST00000364351 NAA60Q9H7X0 242 aa-3.44□□□□□ -2.96
RNU4-40P-201ENST00000364351 TAS2R8Q9NYW2 309 aa-3.44□□□□□ -2.96
RNU4-40P-201ENST00000364351 ERG28Q9UKR5 140 aa-3.44□□□□□ -2.96
RNU4-40P-201ENST00000364351 CDC42BPGQ6DT37 1551 aa-3.45□□□□□ -2.96
RNU4-40P-201ENST00000364351 IBTKQ9P2D0 1353 aaPredicted RBP-3.45□□□□□ -2.96
RNU4-40P-201ENST00000364351 TRAV2A0A0B4J234 112 aa-3.45□□□□□ -2.96
RNU4-40P-201ENST00000364351 G3V2T6 193 aa-3.45□□□□□ -2.96
RNU4-40P-201ENST00000364351 SLC25A26Q70HW3 274 aa-3.45□□□□□ -2.96
RNU4-40P-201ENST00000364351 ATP6V1DQ9Y5K8 247 aa-3.45□□□□□ -2.96
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms