RNA–Protein interactions for RNA: ENST00000363858.1

RNU6-271P-201, Transcript of RNA, U6 small nuclear 271, pseudogene, humanhuman

BASIC

Gene RNU6-271P, Length 105 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-271P-201ENST00000363858 MED12LQ86YW9 2145 aa0.67□□□□□ -2.3
RNU6-271P-201ENST00000363858 VWDEQ8N2E2 1590 aa0.67□□□□□ -2.3
RNU6-271P-201ENST00000363858 SIX6O95475 246 aa0.67□□□□□ -2.3
RNU6-271P-201ENST00000363858 TFF1P04155 84 aa0.67□□□□□ -2.3
RNU6-271P-201ENST00000363858 ELOF1P60002 83 aaKnown RBP0.67□□□□□ -2.3
RNU6-271P-201ENST00000363858 GNG11P61952 73 aa0.67□□□□□ -2.3
RNU6-271P-201ENST00000363858 UBA52P62987 128 aaKnown RBP0.67□□□□□ -2.3
RNU6-271P-201ENST00000363858 KLKP1Q107X0 134 aa0.67□□□□□ -2.3
RNU6-271P-201ENST00000363858 FXYD3Q14802 87 aa0.67□□□□□ -2.3
RNU6-271P-201ENST00000363858 ZNF56Q15929 161 aa0.67□□□□□ -2.3
RNU6-271P-201ENST00000363858 NCMAPQ5T1S8 102 aa0.67□□□□□ -2.3
RNU6-271P-201ENST00000363858 DEFB132Q7Z7B7 95 aa0.67□□□□□ -2.3
RNU6-271P-201ENST00000363858 Q86TA4 180 aa0.67□□□□□ -2.3
RNU6-271P-201ENST00000363858 C20orf197Q8N268 126 aa0.67□□□□□ -2.3
RNU6-271P-201ENST00000363858 DPY30Q9C005 99 aa0.67□□□□□ -2.3
RNU6-271P-201ENST00000363858 UQCR10Q9UDW1 63 aa0.67□□□□□ -2.3
RNU6-271P-201ENST00000363858 V9GYS6 101 aa0.67□□□□□ -2.3
RNU6-271P-201ENST00000363858 DLEC1Q9Y238 1755 aa0.67□□□□□ -2.3
RNU6-271P-201ENST00000363858 SHROOM2Q13796 1616 aa0.67□□□□□ -2.3
RNU6-271P-201ENST00000363858 PHRF1Q9P1Y6 1649 aaKnown RBP0.67□□□□□ -2.3
RNU6-271P-201ENST00000363858 GBF1Q92538 1859 aa0.67□□□□□ -2.3
RNU6-271P-201ENST00000363858 HEATR1Q9H583 2144 aaKnown RBP0.67□□□□□ -2.3
RNU6-271P-201ENST00000363858 MAGI1Q96QZ7 1491 aaPredicted RBP0.67□□□□□ -2.3
RNU6-271P-201ENST00000363858 LAMC3Q9Y6N6 1575 aa0.66□□□□□ -2.3
RNU6-271P-201ENST00000363858 TNRC6BQ9UPQ9 1833 aaKnown RBP0.66□□□□□ -2.3
RNU6-271P-201ENST00000363858 ARFGEF3Q5TH69 2177 aa0.66□□□□□ -2.3
RNU6-271P-201ENST00000363858 BAZ2BQ9UIF8 2168 aaKnown RBP0.66□□□□□ -2.3
RNU6-271P-201ENST00000363858 PTPRFP10586 1907 aa0.66□□□□□ -2.3
RNU6-271P-201ENST00000363858 ARHGEF12Q9NZN5 1544 aa0.66□□□□□ -2.3
RNU6-271P-201ENST00000363858 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.66□□□□□ -2.3
RNU6-271P-201ENST00000363858 TRBV30A0A0K0K1B3 111 aa0.66□□□□□ -2.3
RNU6-271P-201ENST00000363858 LOC101927531A0A1B0GV80 90 aa0.66□□□□□ -2.3
RNU6-271P-201ENST00000363858 CRYM-AS1A6NIL9 109 aa0.66□□□□□ -2.3
RNU6-271P-201ENST00000363858 HCG22E2RYF7 251 aa0.66□□□□□ -2.3
RNU6-271P-201ENST00000363858 COX6CP09669 75 aa0.66□□□□□ -2.3
RNU6-271P-201ENST00000363858 CCL3L1P16619 93 aa0.66□□□□□ -2.3
RNU6-271P-201ENST00000363858 SNCAP37840 140 aa0.66□□□□□ -2.3
RNU6-271P-201ENST00000363858 FXYD6P3P58550 94 aa0.66□□□□□ -2.3
RNU6-271P-201ENST00000363858 FXYD4P59646 89 aa0.66□□□□□ -2.3
RNU6-271P-201ENST00000363858 C10orf128Q5T292 105 aa0.66□□□□□ -2.3
RNU6-271P-201ENST00000363858 C5orf56Q8N8D9 126 aa0.66□□□□□ -2.3
RNU6-271P-201ENST00000363858 COX7B2Q8TF08 81 aa0.66□□□□□ -2.3
RNU6-271P-201ENST00000363858 CCL19Q99731 98 aa0.66□□□□□ -2.3
RNU6-271P-201ENST00000363858 VAMP8Q9BV40 100 aa0.66□□□□□ -2.3
RNU6-271P-201ENST00000363858 TMEM14BQ9NUH8 114 aa0.66□□□□□ -2.3
RNU6-271P-201ENST00000363858 LENEPQ9Y5L5 61 aa0.66□□□□□ -2.3
RNU6-271P-201ENST00000363858 LINC00312Q9Y6C7 94 aa0.66□□□□□ -2.3
RNU6-271P-201ENST00000363858 V9GYV3 84 aa0.66□□□□□ -2.3
RNU6-271P-201ENST00000363858 TRPM7Q96QT4 1865 aa0.66□□□□□ -2.3
RNU6-271P-201ENST00000363858 PRRC2BQ5JSZ5 2229 aaKnown RBP0.66□□□□□ -2.3
RNU6-271P-201ENST00000363858 UNC13CQ8NB66 2214 aa0.66□□□□□ -2.3
RNU6-271P-201ENST00000363858 KIAA1549Q9HCM3 1950 aa0.66□□□□□ -2.3
RNU6-271P-201ENST00000363858 OTOGLQ3ZCN5 2332 aa0.66□□□□□ -2.3
RNU6-271P-201ENST00000363858 ARAP2Q8WZ64 1704 aa0.66□□□□□ -2.3
RNU6-271P-201ENST00000363858 ADGRL2O95490 1459 aa0.66□□□□□ -2.3
RNU6-271P-201ENST00000363858 SHANK2Q9UPX8 1470 aa0.66□□□□□ -2.3
RNU6-271P-201ENST00000363858 FREM1Q5H8C1 2179 aa0.66□□□□□ -2.3
RNU6-271P-201ENST00000363858 PTPRDP23468 1912 aa0.66□□□□□ -2.3
RNU6-271P-201ENST00000363858 CR1P17927 2039 aa0.65□□□□□ -2.3
RNU6-271P-201ENST00000363858 ABCC3O15438 1527 aa0.65□□□□□ -2.31
RNU6-271P-201ENST00000363858 MCM3APO60318 1980 aa0.65□□□□□ -2.31
RNU6-271P-201ENST00000363858 EML5Q05BV3 1969 aa0.65□□□□□ -2.31
RNU6-271P-201ENST00000363858 TOP2BQ02880 1626 aa0.65□□□□□ -2.31
RNU6-271P-201ENST00000363858 NRXN2Q9P2S2 1712 aa0.65□□□□□ -2.31
RNU6-271P-201ENST00000363858 NBDYA0A0U1RRE5 68 aa0.65□□□□□ -2.31
RNU6-271P-201ENST00000363858 LOC285095A0A1B0GVY8 99 aa0.65□□□□□ -2.31
RNU6-271P-201ENST00000363858 PVALEFA0A1B0GWK0 134 aa0.65□□□□□ -2.31
RNU6-271P-201ENST00000363858 A0A1W2PPM0 123 aa0.65□□□□□ -2.31
RNU6-271P-201ENST00000363858 F2Z2F3 143 aa0.65□□□□□ -2.31
RNU6-271P-201ENST00000363858 ATOX1O00244 68 aa0.65□□□□□ -2.31
RNU6-271P-201ENST00000363858 GNGT2O14610 69 aa0.65□□□□□ -2.31
RNU6-271P-201ENST00000363858 NDUFC1O43677 76 aa0.65□□□□□ -2.31
RNU6-271P-201ENST00000363858 ANGP03950 147 aaKnown RBP0.65□□□□□ -2.31
RNU6-271P-201ENST00000363858 EDDM3BP56851 147 aa0.65□□□□□ -2.31
RNU6-271P-201ENST00000363858 SPINK13Q1W4C9 94 aa0.65□□□□□ -2.31
RNU6-271P-201ENST00000363858 MGST2Q99735 147 aa0.65□□□□□ -2.31
RNU6-271P-201ENST00000363858 PMCHL2Q9BQD1 86 aa0.65□□□□□ -2.31
RNU6-271P-201ENST00000363858 SNHG12Q9BXW3 62 aa0.65□□□□□ -2.31
RNU6-271P-201ENST00000363858 DPH3P1Q9H4G8 78 aa0.65□□□□□ -2.31
RNU6-271P-201ENST00000363858 DYNLRB1Q9NP97 96 aa0.65□□□□□ -2.31
RNU6-271P-201ENST00000363858 R4GMQ9 66 aa0.65□□□□□ -2.31
RNU6-271P-201ENST00000363858 V9GYH0 126 aa0.65□□□□□ -2.31
RNU6-271P-201ENST00000363858 ROBO1Q9Y6N7 1651 aa0.65□□□□□ -2.31
RNU6-271P-201ENST00000363858 MUC22E2RYF6 1773 aaPredicted RBP0.65□□□□□ -2.31
RNU6-271P-201ENST00000363858 ABCA3Q99758 1704 aa0.64□□□□□ -2.31
RNU6-271P-201ENST00000363858 TRBV7-3A0A075B6L6 115 aa0.64□□□□□ -2.31
RNU6-271P-201ENST00000363858 MPC2O95563 127 aa0.64□□□□□ -2.31
RNU6-271P-201ENST00000363858 PPP1R17O96001 155 aa0.64□□□□□ -2.31
RNU6-271P-201ENST00000363858 TRAPPC2P0DI81 140 aa0.64□□□□□ -2.31
RNU6-271P-201ENST00000363858 TRAPPC2BP0DI82 140 aa0.64□□□□□ -2.31
RNU6-271P-201ENST00000363858 EFNA4P52798 201 aa0.64□□□□□ -2.31
RNU6-271P-201ENST00000363858 KRTAP12-1P59990 96 aa0.64□□□□□ -2.31
RNU6-271P-201ENST00000363858 SEC11AP67812 179 aa0.64□□□□□ -2.31
RNU6-271P-201ENST00000363858 Q0VG73 95 aa0.64□□□□□ -2.31
RNU6-271P-201ENST00000363858 C6orf52Q5T4I8 152 aa0.64□□□□□ -2.31
RNU6-271P-201ENST00000363858 C10orf99Q6UWK7 81 aa0.64□□□□□ -2.31
RNU6-271P-201ENST00000363858 BAGE3Q86Y29 109 aa0.64□□□□□ -2.31
RNU6-271P-201ENST00000363858 FAM167A-AS1Q96KT0 104 aa0.64□□□□□ -2.31
RNU6-271P-201ENST00000363858 CCDC18Q5T9S5 1454 aa0.64□□□□□ -2.31
RNU6-271P-201ENST00000363858 PLEKHH2Q8IVE3 1493 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms